Genomics Reporting Implementation Guide
2.0.0 - trial-use

This page is part of the Genetic Reporting Implementation Guide (v2.0.0: STU 2) based on FHIR R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

: VCFFile - JSON Representation

Raw json | Download


{
  "resourceType" : "DocumentReference",
  "id" : "VCFFile",
  "meta" : {
    "profile" : [
      "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-document-reference"
    ]
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource \"VCFFile\" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-genomics-document-reference.html\">Genomics DocumentReference</a></p></div><p><b>status</b>: current</p><p><b>subject</b>: <a href=\"Patient-CGPatientExample01.html\">Patient/CGPatientExample01</a> \" EVERYMAN\"</p><p><b>description</b>: ... details about how this VCF was generated ...</p><blockquote><p><b>content</b></p></blockquote><h3>Contexts</h3><table class=\"grid\"><tr><td>-</td><td><b>Related</b></td></tr><tr><td>*</td><td><a href=\"DiagnosticReport-PGxGenomicsReportEMERGE.html\">DiagnosticReport/PGxGenomicsReportEMERGE</a></td></tr></table></div>"
  },
  "status" : "current",
  "subject" : {
    "reference" : "Patient/CGPatientExample01"
  },
  "description" : "... details about how this VCF was generated ...",
  "content" : [
    {
      "attachment" : {
        "url" : "http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/ALL.chr1.phase3_shapeit2_mvncall_integrated_v5b.20130502.genotypes.vcf.gz"
      }
    }
  ],
  "context" : {
    "related" : [
      {
        "reference" : "DiagnosticReport/PGxGenomicsReportEMERGE"
      }
    ]
  }
}