Validation Results for GenomicsReporting

Generated Mon May 09 16:58:00 UTC 2022, FHIR version 4.0.1 for hl7.fhir.uv.genomics-reporting#2.0.0 (canonical = http://hl7.org/fhir/uv/genomics-reporting (history)). See Errors Only

Quality Checks
Publisher Version:IG Publisher Version: v1.1.118
Publication Code:genomics-reporting . PackageId = hl7.fhir.uv.genomics-reporting, Canonical = http://hl7.org/fhir/uv/genomics-reporting
Realm Check for UV:
  • n/a
Version Check:2.0.0 = ok. Step trial-use in sequence STU 2, to be published at http://hl7.org/fhir/uv/genomics-reporting/STU2 (subdir = STU2)
Supressed Messages:97 Suppressed Issues
Dependency Checks:
PackageVersionFHIR ReleaseCanonicalWeb BaseComment
.. hl7.fhir.uv.genomics-reporting2.0.04.0.1http://hl7.org/fhir/uv/genomics-reporting
Templates: hl7.fhir.template#0.3.3 -> hl7.base.template#0.3.2 -> fhir.base.template#0.2.2
Publication Rules:Code = genomics-reporting. All OK (path - http://hl7.org/fhir/uv/genomics-reporting/STU2)

The copyrightYear parameter ('2022+') in the IG resource is good
HTA Analysis:All OK
R5 Dependencies:(none)
Previous Version Comparison: Comparison with version 1.1.0
Summary: broken links = 0, errors = 0, warn = 0, info = 0
FilenameErrorsWarningsHints
Build Errors000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-CG-IG-HLA-FullBundle-01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-CYP2C19000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-cgexample000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-cgexample-withGrouping000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-complexVariant-nonHGVS000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-compound-heterozygote000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-oncology-diagnostic000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-oncology-report-example000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-oncologyexamples-r4000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-oncologyexamples-r4-withGrouping000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-pgxexample000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-sequence-phase-relation-CYP2C19000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-clinvar-evidence-level-custom-cs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-coded-annotation-types-cs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-pharmgkb-evidence-level-custom-cs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-sequence-phase-relationship-cs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-tbd-codes-cs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-variant-confidence-status-cs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ConceptMap-dna-change-type-map000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DiagnosticReport-GenomicsReportExample01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DiagnosticReport-PGxGenomicsReportEMERGE000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DiagnosticReport-PGxGenomicsReportEMERGE-withGrouping000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DiagnosticReport-diagnosticreport-hla-glstring-r4000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DocumentReference-VCFFile000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\MedicationStatement-MedicationStatementWarfarin000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-AnnotationExample000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleGermlineCNV000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleGermlineDEL000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleGermlineINV000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleSomaticCNV000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleSomaticDEL000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleSomaticINV000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Genotype-Clinical-Trial-Example-using-haplotypes000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GenotypeExample1000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GenotypeExamplePharmVar000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GrouperEx01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GrouperEx02000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GrouperEx03000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-HaplotypeExamplePharmVar01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-HaplotypeExamplePharmVar02000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-HaplotypeSet-Clinical-Trial-Example-1of2000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-HaplotypeSet-Clinical-Trial-Example-2of2000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-MicrosatelliteInstabilityExample01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-OverallInterpExample1000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-OverallInterpExample2000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-geno-1001000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-geno-1002000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-geno-1003000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1011000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1012000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1013000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1014000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1015000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1016000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1017000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1018000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1019000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1020000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1021000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-PolyGenicDiagnosticImpExample000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-RegionStudiedPGx1000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-RegionStudiedPGx2000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-RegionStudiedPGx3000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-SNVexample000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-SequencePhaseRelationExample1000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Therapeutic-Implication-Clinical-Trial-2000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Therapeutic-Implication-Clinical-Trial-Somatic000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TherapeuticImplicationExample1000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TumorMutationBurdenExample01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp02000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp03000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp04000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp05000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp06000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Variant-Somatic-Clinical-Trial000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-VariantExample1000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-VariantExample2000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-genotype-hla-a-glstring-r4000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-haplotype-hla-a-1-r4000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-obs-idh-ex000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\OperationDefinition-find-subject-variants000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Organization-ExampleLab000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Organization-ExampleOrg000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Patient-CGPatientExample01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Patient-ExamplePatient000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\RiskAssessment-GenRiskDiabetesT2000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ServiceRequest-ExampleServiceRequest000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ServiceRequest-GenomicsServiceRequestExample01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ServiceRequest-eMERGEServiceRequest000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ServiceRequest-servicerequest-hla-a-r4000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Specimen-ExampleSpecimen000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Specimen-GenomicSpecimenExample01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Specimen-GenomicSpecimenExample02000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Specimen-specimen-hla-r4000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-annotation-code000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-coded-annotation000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-diagnostic-implication000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-finding000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-followup-recommendation000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomic-report-note000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-artifact000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-base000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-document-reference000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-file000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-report000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-risk-assessment000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genotype000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-haplotype000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-implication000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-medication-assessed000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-medication-recommendation000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-msi000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-overall-interpretation000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-recommended-action000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-region-studied000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-sequence-phase-relationship000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-therapeutic-implication000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-therapy-assessed000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-tmb000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-variant000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-MedicationRecommendationExample1000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx01000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx02000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx03000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx04000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx05000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-coded-annotation-types-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-condition-inheritance-mode-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-dna-change-type-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-evidence-level-example-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-functional-effect-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-genetic-therapeutic-implications-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-hgnc-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-hgvs-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-high-low-codes-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-molecular-consequence-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-sequence-phase-relationship-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-tbd-codes-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-variant-confidence-status-vs000
C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-variant-inheritance-vs000
c:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ImplementationGuide-genomics-reporting000

n/a Show Validation Information


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-CG-IG-HLA-FullBundle-01.json Show Validation Information (80)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-CYP2C19.json Show Validation Information (763)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-cgexample.json Show Validation Information (105)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-cgexample-withGrouping.json Show Validation Information (116)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-complexVariant-nonHGVS.json Show Validation Information (7)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-compound-heterozygote.json Show Validation Information (7)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-oncology-diagnostic.json Show Validation Information (27)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-oncology-report-example.json Show Validation Information (29)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-oncologyexamples-r4.json Show Validation Information (97)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-oncologyexamples-r4-withGrouping.json Show Validation Information (113)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-pgxexample.json Show Validation Information (74)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Bundle-bundle-sequence-phase-relation-CYP2C19.json Show Validation Information (33)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-clinvar-evidence-level-custom-cs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-coded-annotation-types-cs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-pharmgkb-evidence-level-custom-cs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-sequence-phase-relationship-cs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-tbd-codes-cs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\CodeSystem-variant-confidence-status-cs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ConceptMap-dna-change-type-map.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DiagnosticReport-GenomicsReportExample01.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DiagnosticReport-PGxGenomicsReportEMERGE.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DiagnosticReport-PGxGenomicsReportEMERGE-withGrouping.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DiagnosticReport-diagnosticreport-hla-glstring-r4.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\DocumentReference-VCFFile.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\MedicationStatement-MedicationStatementWarfarin.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-AnnotationExample.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleGermlineCNV.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleGermlineDEL.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleGermlineINV.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleSomaticCNV.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleSomaticDEL.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-ExampleSomaticINV.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Genotype-Clinical-Trial-Example-using-haplotypes.json Show Validation Information (4)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GenotypeExample1.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GenotypeExamplePharmVar.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GrouperEx01.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GrouperEx02.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-GrouperEx03.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-HaplotypeExamplePharmVar01.json Show Validation Information (3)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-HaplotypeExamplePharmVar02.json Show Validation Information (3)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-HaplotypeSet-Clinical-Trial-Example-1of2.json Show Validation Information (3)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-HaplotypeSet-Clinical-Trial-Example-2of2.json Show Validation Information (3)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-MicrosatelliteInstabilityExample01.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-OverallInterpExample1.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-OverallInterpExample2.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-geno-1001.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-geno-1002.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-geno-1003.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1011.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1012.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1013.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1014.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1015.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1016.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1017.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1018.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1019.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1020.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Pgx-var-1021.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-PolyGenicDiagnosticImpExample.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-RegionStudiedPGx1.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-RegionStudiedPGx2.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-RegionStudiedPGx3.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-SNVexample.json Show Validation Information (4)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-SequencePhaseRelationExample1.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Therapeutic-Implication-Clinical-Trial-2.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Therapeutic-Implication-Clinical-Trial-Somatic.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TherapeuticImplicationExample1.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TumorMutationBurdenExample01.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp01.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp02.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp03.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp04.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp05.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-TxImp06.json Show Validation Information (9)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-Variant-Somatic-Clinical-Trial.json Show Validation Information (4)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-VariantExample1.json Show Validation Information (3)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-VariantExample2.json Show Validation Information (4)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-genotype-hla-a-glstring-r4.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-haplotype-hla-a-1-r4.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Observation-obs-idh-ex.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\OperationDefinition-find-subject-variants.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Organization-ExampleLab.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Organization-ExampleOrg.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Patient-CGPatientExample01.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Patient-ExamplePatient.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\RiskAssessment-GenRiskDiabetesT2.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ServiceRequest-ExampleServiceRequest.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ServiceRequest-GenomicsServiceRequestExample01.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ServiceRequest-eMERGEServiceRequest.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ServiceRequest-servicerequest-hla-a-r4.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Specimen-ExampleSpecimen.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Specimen-GenomicSpecimenExample01.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Specimen-GenomicSpecimenExample02.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Specimen-specimen-hla-r4.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-annotation-code.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-coded-annotation.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-diagnostic-implication.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-finding.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-followup-recommendation.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomic-report-note.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-artifact.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-base.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-document-reference.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-file.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-report.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genomics-risk-assessment.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-genotype.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-haplotype.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-implication.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-medication-assessed.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-medication-recommendation.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-msi.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-overall-interpretation.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-recommended-action.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-region-studied.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-sequence-phase-relationship.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-therapeutic-implication.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-therapy-assessed.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-tmb.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\StructureDefinition-variant.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-MedicationRecommendationExample1.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx01.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx02.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx03.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx04.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\Task-PGxRecEx05.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-coded-annotation-types-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-condition-inheritance-mode-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-dna-change-type-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-evidence-level-example-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-functional-effect-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-genetic-therapeutic-implications-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-hgnc-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-hgvs-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-high-low-codes-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-molecular-consequence-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-sequence-phase-relationship-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-tbd-codes-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-variant-confidence-status-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ValueSet-variant-inheritance-vs.json Show Validation Information (1)


C:\temp\hl7.fhir.uv.genomics-reporting#2.0.0\fsh-generated\resources\ImplementationGuide-genomics-reporting.json Show Validation Information (0)

Suppressed Messages (Warnings, hints, broken links)

CodeSystems not supported yet

Each of these reference MolecularSequence. Our profiles limit Observation.derivedFrom() to other profiles, but in HLA use cases, they use it to reference to MolecularSequence. The group has decided we can allow MolecularSequence, but we do not want to update our slicing as this is more of an edge case, versus the typical case of referring to our other profiles.

Misc information messages

Suppress Process Info messages

ValueSets not recognized yet because of unrecognized CodeSystems

additional component details that can be shared with a variant (we will likely provide better guidance for this in the future, but this is OK for now) (details about an array variant, and representing a complex variant)

example of using DiagnosticImplication.derivedFrom as logical references

example other Observations, which is acceptable. Examples include panels which shows some additional grouping of other observations, other genomics related observations that do not have profiles.

the IG Validator returns different warnings on this error: https://github.com/HL7/fhir-ig-publisher/issues/420

these use an R4 Core extension that exists for HLA

Errors sorted by type