Genomics Reporting Implementation Guide
2.0.0 - trial-use

This page is part of the Genetic Reporting Implementation Guide (v2.0.0: STU 2) based on FHIR R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

: GenomicsReportExample01 - XML Representation

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<DiagnosticReport xmlns="http://hl7.org/fhir">
  <id value="GenomicsReportExample01"/>
  <meta>
    <profile
             value="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-report"/>
  </meta>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><h2><span title="Codes: {http://loinc.org 57979-7}">HLA-B*15:02 [Presence]</span> (<span title="Codes: {http://terminology.hl7.org/CodeSystem/v2-0074 GE}">Genetics</span>) </h2><table class="grid"><tr><td>Subject</td><td><b>Adam B. Everyman </b> male, DoB: 1951-01-20 ( Medical Record Number: m123 (USUAL))</td></tr><tr><td>When For</td><td>2016</td></tr><tr><td>Reported</td><td>2018-03-06 12:00:00-0500</td></tr></table><p><b>Report Details</b></p><table class="grid"><tr><td><b>Code</b></td><td><b>Value</b></td><td><b>When For</b></td></tr><tr><td><a href="Observation-TherapeuticImplicationExample1.html"><span title="Codes: {http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes-cs therapeutic-implication}">Therapeutic Implication</span></a></td><td></td><td></td></tr><tr><td><a href="Observation-GenotypeExample1.html"><span title="Codes: {http://loinc.org 84413-4}">Genotype display name</span></a></td><td><span title="Codes: {http://www.ncbi.nlm.nih.gov/clinvar 14909}">HLA-B*15:02</span></td><td>2018</td></tr><tr><td><a href="Observation-OverallInterpExample1.html"><span title="Codes: {http://loinc.org 51968-6}">Discrete variation analysis overall interpretation</span></a></td><td><span title="Codes: {http://loinc.org LA6576-8}">Positive</span></td><td></td></tr></table></div>
  </text>
  <extension
             url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/recommended-action">
    <valueReference>
      <reference value="Task/MedicationRecommendationExample1"/>
    </valueReference>
  </extension>
  <extension
             url="http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-artifact">
    <valueRelatedArtifact>
      <type value="citation"/>
      <url
           value="https://cpicpgx.org/guidelines/guideline-for-clopidogrel-and-cyp2c19)"/>
    </valueRelatedArtifact>
  </extension>
  <basedOn>
    <reference value="ServiceRequest/GenomicsServiceRequestExample01"/>
  </basedOn>
  <status value="final"/>
  <category>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/v2-0074"/>
      <code value="GE"/>
    </coding>
  </category>
  <code>
    <coding>
      <system value="http://loinc.org"/>
      <code value="57979-7"/>
      <display value="HLA-B*15:02 [Presence]"/>
    </coding>
  </code>
  <subject>
    <reference value="Patient/CGPatientExample01"/>
  </subject>
  <effectiveDateTime value="2016"/>
  <issued value="2018-03-06T00:00:00-05:00"/>
  <performer>
    <reference value="Organization/ExampleOrg"/>
  </performer>
  <result>
    <reference value="Observation/TherapeuticImplicationExample1"/>
    <display value="impact for high risk allele"/>
  </result>
  <result>
    <reference value="Observation/GenotypeExample1"/>
  </result>
  <result>
    <reference value="Observation/OverallInterpExample1"/>
  </result>
</DiagnosticReport>