HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU Ballot 1

This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v0.9.1: STU 1 Ballot 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

GenomicSourceClassVS


<ValueSet xmlns="http://hl7.org/fhir">
  <id value="onco-core-GenomicSourceClassVS"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml">
<p><b>GenomicSourceClassVS ValueSet</b></p>
<p>The genomic class of the specimen being analyzed, for example, germline for inherited genome, somatic for cancer genome, and prenatal for fetal genome.</p>
</div>
  </text>
  <url
       value="http://hl7.org/fhir/us/mcode/ValueSet/onco-core-GenomicSourceClassVS"/>
  <version value="0.9.1"/>
  <name value="GenomicSourceClassVS"/>
  <title value="GenomicSourceClassVS"/>
  <status value="draft"/>
  <date value="2019-08-01T00:00:00-04:00"/>
  <publisher value="HL7 International Clinical Interoperability Council"/>
  <contact>
    <telecom>
      <system value="url"/>
      <value value="http://www.hl7.org/Special/committees/cic"/>
    </telecom>
  </contact>
  <description
               value="The genomic class of the specimen being analyzed, for example, germline for inherited genome, somatic for cancer genome, and prenatal for fetal genome."/>
  <compose>
    <include>
      <system value="http://loinc.org"/>
      <concept>
        <code value="LA6683-2"/>
        <display value="Germline"/>
      </concept>
      <concept>
        <code value="LA6684-0"/>
        <display value="Somatic"/>
      </concept>
      <concept>
        <code value="LA10429-1"/>
        <display value="Fetal"/>
      </concept>
      <concept>
        <code value="LA18194-3"/>
        <display value="Likely germline"/>
      </concept>
      <concept>
        <code value="LA18195-0"/>
        <display value="Likely somatic"/>
      </concept>
      <concept>
        <code value="LA18196-8"/>
        <display value="Likely fetal"/>
      </concept>
      <concept>
        <code value="LA18197-6"/>
        <display value="Unknown genomic origin"/>
      </concept>
      <concept>
        <code value="LA26807-0"/>
        <display value="De novo"/>
      </concept>
    </include>
  </compose>
</ValueSet>