HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU Ballot 1

This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v0.9.1: STU 1 Ballot 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

GenomicSourceClassVS

@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:ValueSet;
  fhir:nodeRole fhir:treeRoot;
  fhir:Resource.id [ fhir:value "onco-core-GenomicSourceClassVS"];
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ];
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n<p><b>GenomicSourceClassVS ValueSet</b></p>\n<p>The genomic class of the specimen being analyzed, for example, germline for inherited genome, somatic for cancer genome, and prenatal for fetal genome.</p>\n</div>"
  ];
  fhir:ValueSet.url [ fhir:value "http://hl7.org/fhir/us/mcode/ValueSet/onco-core-GenomicSourceClassVS"];
  fhir:ValueSet.version [ fhir:value "0.9.1"];
  fhir:ValueSet.name [ fhir:value "GenomicSourceClassVS"];
  fhir:ValueSet.title [ fhir:value "GenomicSourceClassVS"];
  fhir:ValueSet.status [ fhir:value "draft"];
  fhir:ValueSet.date [ fhir:value "2019-08-01T00:00:00-04:00"^^xsd:dateTime];
  fhir:ValueSet.publisher [ fhir:value "HL7 International Clinical Interoperability Council"];
  fhir:ValueSet.contact [
     fhir:index 0;
     fhir:ContactDetail.telecom [
       fhir:index 0;
       fhir:ContactPoint.system [ fhir:value "url" ];
       fhir:ContactPoint.value [ fhir:value "http://www.hl7.org/Special/committees/cic" ]     ]
  ];
  fhir:ValueSet.description [ fhir:value "The genomic class of the specimen being analyzed, for example, germline for inherited genome, somatic for cancer genome, and prenatal for fetal genome."];
  fhir:ValueSet.compose [
     fhir:ValueSet.compose.include [
       fhir:index 0;
       fhir:ValueSet.compose.include.system [ fhir:value "http://loinc.org" ];
       fhir:ValueSet.compose.include.concept [
         fhir:index 0;
         fhir:ValueSet.compose.include.concept.code [ fhir:value "LA6683-2" ];
         fhir:ValueSet.compose.include.concept.display [ fhir:value "Germline" ]       ], [
         fhir:index 1;
         fhir:ValueSet.compose.include.concept.code [ fhir:value "LA6684-0" ];
         fhir:ValueSet.compose.include.concept.display [ fhir:value "Somatic" ]       ], [
         fhir:index 2;
         fhir:ValueSet.compose.include.concept.code [ fhir:value "LA10429-1" ];
         fhir:ValueSet.compose.include.concept.display [ fhir:value "Fetal" ]       ], [
         fhir:index 3;
         fhir:ValueSet.compose.include.concept.code [ fhir:value "LA18194-3" ];
         fhir:ValueSet.compose.include.concept.display [ fhir:value "Likely germline" ]       ], [
         fhir:index 4;
         fhir:ValueSet.compose.include.concept.code [ fhir:value "LA18195-0" ];
         fhir:ValueSet.compose.include.concept.display [ fhir:value "Likely somatic" ]       ], [
         fhir:index 5;
         fhir:ValueSet.compose.include.concept.code [ fhir:value "LA18196-8" ];
         fhir:ValueSet.compose.include.concept.display [ fhir:value "Likely fetal" ]       ], [
         fhir:index 6;
         fhir:ValueSet.compose.include.concept.code [ fhir:value "LA18197-6" ];
         fhir:ValueSet.compose.include.concept.display [ fhir:value "Unknown genomic origin" ]       ], [
         fhir:index 7;
         fhir:ValueSet.compose.include.concept.code [ fhir:value "LA26807-0" ];
         fhir:ValueSet.compose.include.concept.display [ fhir:value "De novo" ]       ]     ]
  ].

# - ontology header ------------------------------------------------------------

 a owl:Ontology;
  owl:imports fhir:fhir.ttl.