HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU Ballot 1

This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v0.9.1: STU 1 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. The current version which supersedes this version is 4.0.0. For a full list of available versions, see the Directory of published versions

GenomicSourceClassVS

{
  "resourceType" : "ValueSet",
  "id" : "onco-core-GenomicSourceClassVS",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n<p><b>GenomicSourceClassVS ValueSet</b></p>\n<p>The genomic class of the specimen being analyzed, for example, germline for inherited genome, somatic for cancer genome, and prenatal for fetal genome.</p>\n</div>"
  },
  "url" : "http://hl7.org/fhir/us/mcode/ValueSet/onco-core-GenomicSourceClassVS",
  "version" : "0.9.1",
  "name" : "GenomicSourceClassVS",
  "title" : "GenomicSourceClassVS",
  "status" : "draft",
  "date" : "2019-08-01T00:00:00-04:00",
  "publisher" : "HL7 International Clinical Interoperability Council",
  "contact" : [
    {
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://www.hl7.org/Special/committees/cic"
        }
      ]
    }
  ],
  "description" : "The genomic class of the specimen being analyzed, for example, germline for inherited genome, somatic for cancer genome, and prenatal for fetal genome.",
  "compose" : {
    "include" : [
      {
        "system" : "http://loinc.org",
        "concept" : [
          {
            "code" : "LA6683-2",
            "display" : "Germline"
          },
          {
            "code" : "LA6684-0",
            "display" : "Somatic"
          },
          {
            "code" : "LA10429-1",
            "display" : "Fetal"
          },
          {
            "code" : "LA18194-3",
            "display" : "Likely germline"
          },
          {
            "code" : "LA18195-0",
            "display" : "Likely somatic"
          },
          {
            "code" : "LA18196-8",
            "display" : "Likely fetal"
          },
          {
            "code" : "LA18197-6",
            "display" : "Unknown genomic origin"
          },
          {
            "code" : "LA26807-0",
            "display" : "De novo"
          }
        ]
      }
    ]
  }
}