HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU Ballot 1

This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v0.9.1: STU 1 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. The current version which supersedes this version is 4.0.0. For a full list of available versions, see the Directory of published versions

Example: mCODEGenomicsReportExample01

{
  "resourceType" : "DiagnosticReport",
  "id" : "mCODEGenomicsReportExample01",
  "meta" : {
    "versionId" : "0.1",
    "lastUpdated" : "2019-04-01T15:35:58.045+00:00",
    "profile" : [
      "http://hl7.org/fhir/us/mcode/StructureDefinition/onco-core-GenomicsReport"
    ]
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>*** mCODE Example: Genomics Report ***</b></p><p><b>Test id</b>: mCODEGenomicsReportExample01</p><p><b>Performer</b>: Foundation Medicine</p><p><b>Test Name</b>: FoundationOne</p><p><b>Status</b>: final</p><p><b>Subject</b>: John B. Anyperson</p><p></p><p><b>Generated Summary:</b></p><p><b>id:</b> Medical Record Number = m123 (USUAL)</p><p><b>Effective</b>: 04/01/2019</p><p><b>Genetic Mutation Tested</b>: STK11</p><p><b>Gene variant presence</b>: DETECTED</p><p><b>Genomic source class</b>: Somatic</p><p><b>Variant HGVS name</b>: NM_000455.4:c.921-1G>C</p><p><b>Variant common name</b>: G242E</p></div>"
  },
  "status" : "final",
  "category" : [
    {
      "coding" : [
        {
          "system" : "http://terminology.hl7.org/CodeSystem/v2-0074",
          "code" : "GE",
          "display" : "Genetics"
        }
      ]
    }
  ],
  "code" : {
    "coding" : [
      {
        "system" : "http://www.ncbi.nlm.nih.gov/gtr",
        "code" : "GTR000527976.2",
        "display" : "FoundationOne"
      }
    ]
  },
  "subject" : {
    "reference" : "Patient/mCODEPatientExample01",
    "display" : "John B. Anyperson"
  },
  "effectiveDateTime" : "2019-04-01",
  "issued" : "2019-04-01T11:45:33+11:00",
  "performer" : [
    {
      "reference" : "Organization/mCODEOrganizationExampleFM1"
    }
  ],
  "result" : [
    {
      "reference" : "Observation/mCODEGeneticVariantTestedExample01"
    },
    {
      "reference" : "Observation/mCODEGeneticVariantFoundExample01"
    }
  ]
}