FHIR Cross-Version Extensions package for FHIR R4 from FHIR R5
0.0.1-snapshot-2 - informative
FHIR Cross-Version Extensions package for FHIR R4 from FHIR R5
0.0.1-snapshot-2 - informative
FHIR Cross-Version Extensions package for FHIR R4 from FHIR R5 - Version 0.0.1-snapshot-2. See the Directory of published versions
| Official URL: http://hl7.org/fhir/5.0/StructureDefinition/extension-GenomicStudy | Version: 0.0.1-snapshot-2 | |||
| Standards status: Informative | Maturity Level: 0 | Computable Name: Ext_R5_GenomicStudy | ||
| This cross-version extension represents GenomicStudy from http://hl7.org/fhir/StructureDefinition/GenomicStudy | 5.0.0 for use in FHIR R4. |
Context of Use
This extension may be used on the following element(s):
Usage info
Usages:
You can also check for usages in the FHIR IG Statistics
Description of Profiles, Differentials, Snapshots, and how the XML and JSON presentations work.
This structure is derived from Extension
Summary
Simple Extension with the type base64Binary, boolean, canonical, code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference, SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta: This cross-version extension represents GenomicStudy from http://hl7.org/fhir/StructureDefinition/GenomicStudy|5.0.0 for use in FHIR R4.
Maturity: 0
This structure is derived from Extension
| Name | Flags | Card. | Type | Description & Constraints Filter:   |
|---|---|---|---|---|
  Extension |
0..* | Extension(4.0.1) | Genomic Study | |
  Slices for extension |
1..* | Extension | Extension Slice: Unordered, Closed by value:url | |
   extension:status |
1..1 | Extension | registered | available | cancelled | entered-in-error | unknown | |
  url |
1..1 | uri | "status" | |
  value[x] |
0..1 | code | registered | available | cancelled | entered-in-error | unknown Binding: R5_genomicstudy_status_for_R4 (0.0.1-snapshot-2) (required): The status of the GenomicStudy. | |
| extension:type |
0..* | Extension | The type of the study (e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling) | |
| url |
1..1 | uri | "type" | |
 value[x] |
0..1 | CodeableConcept | The type of the study (e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling) Binding: R5_genomicstudy_type_for_R4 (0.0.1-snapshot-2) (example): The type relevant to GenomicStudy. | |
| extension:encounter |
0..1 | Extension | The healthcare event with which this genomics study is associated | |
| url |
1..1 | uri | "encounter" | |
 value[x] |
0..1 | Reference() | The healthcare event with which this genomics study is associated | |
| extension:startDate |
0..1 | Extension | When the genomic study was started | |
| url |
1..1 | uri | "startDate" | |
| value[x] |
0..1 | dateTime | When the genomic study was started | |
| extension:basedOn |
0..* | Extension | Event resources that the genomic study is based on | |
| url |
1..1 | uri | "basedOn" | |
| value[x] |
0..1 | Reference() | Event resources that the genomic study is based on | |
| extension:referrer |
0..1 | Extension | Healthcare professional who requested or referred the genomic study | |
| url |
1..1 | uri | "referrer" | |
| value[x] |
0..1 | Reference() | Healthcare professional who requested or referred the genomic study | |
| extension:interpreter |
0..* | Extension | Healthcare professionals who interpreted the genomic study | |
| url |
1..1 | uri | "interpreter" | |
| value[x] |
0..1 | Reference() | Healthcare professionals who interpreted the genomic study | |
| extension:reason |
0..* | Extension | Why the genomic study was performed | |
 Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
 extension:concept |
0..1 | Extension | Reference to a concept (by class) | |
| url |
1..1 | uri | "concept" | |
| value[x] |
0..1 | CodeableConcept | Reference to a concept (by class) | |
| extension:reference |
0..1 | Extension | Reference to a resource (by instance) | |
| url |
1..1 | uri | "reference" | |
| value[x] |
0..1 | Reference() | Reference to a resource (by instance) | |
 extension:_datatype |
0..1 | (Complex) | Data type name for GenomicStudy.reason from FHIR R5 URL: http://hl7.org/fhir/StructureDefinition/_datatype | |
 value[x] |
1..1 | string | Value of extension Fixed Value: CodeableReference | |
| url |
1..1 | uri | "reason" | |
| extension:instantiatesCanonical |
0..1 | Extension | The defined protocol that describes the study | |
| url |
1..1 | uri | "instantiatesCanonical" | |
| value[x] |
0..1 | canonical() | The defined protocol that describes the study | |
| extension:instantiatesUri |
0..1 | Extension | The URL pointing to an externally maintained protocol that describes the study | |
| url |
1..1 | uri | "instantiatesUri" | |
| value[x] |
0..1 | uri | The URL pointing to an externally maintained protocol that describes the study | |
| extension:note |
0..* | Extension | Comments related to the genomic study | |
| url |
1..1 | uri | "note" | |
| value[x] |
0..1 | Annotation | Comments related to the genomic study | |
| extension:description |
0..1 | Extension | Description of the genomic study | |
| url |
1..1 | uri | "description" | |
| value[x] |
0..1 | markdown | Description of the genomic study | |
| extension:analysis |
0..* | Extension | Genomic Analysis Event | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:identifier |
0..* | Extension | Identifiers for the analysis event | |
| url |
1..1 | uri | "identifier" | |
| value[x] |
0..1 | Identifier | Identifiers for the analysis event | |
| extension:methodType |
0..* | Extension | Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) | |
| url |
1..1 | uri | "methodType" | |
| value[x] |
0..1 | CodeableConcept | Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) Binding: R5_genomicstudy_methodtype_for_R4 (0.0.1-snapshot-2) (example): The method type of the GenomicStudy analysis. | |
| extension:changeType |
0..* | Extension | Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) | |
| url |
1..1 | uri | "changeType" | |
| value[x] |
0..1 | CodeableConcept | Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) Binding: R5_genomicstudy_changetype_for_R4 (0.0.1-snapshot-2) (example): The change type relevant to GenomicStudy analysis. | |
| extension:genomeBuild |
0..1 | Extension | Genome build that is used in this analysis | |
| url |
1..1 | uri | "genomeBuild" | |
| value[x] |
0..1 | CodeableConcept | Genome build that is used in this analysis Binding: AccountStatus (extensible): Human reference sequence NCBI build ID | |
| extension:instantiatesCanonical |
0..1 | Extension | The defined protocol that describes the analysis | |
| url |
1..1 | uri | "instantiatesCanonical" | |
| value[x] |
0..1 | canonical() | The defined protocol that describes the analysis | |
| extension:instantiatesUri |
0..1 | Extension | The URL pointing to an externally maintained protocol that describes the analysis | |
| url |
1..1 | uri | "instantiatesUri" | |
| value[x] |
0..1 | uri | The URL pointing to an externally maintained protocol that describes the analysis | |
| extension:title |
0..1 | Extension | Name of the analysis event (human friendly) | |
| url |
1..1 | uri | "title" | |
| value[x] |
0..1 | string | Name of the analysis event (human friendly) | |
| extension:focus |
0..* | Extension | What the genomic analysis is about, when it is not about the subject of record | |
| url |
1..1 | uri | "focus" | |
| value[x] |
0..1 | Reference() | What the genomic analysis is about, when it is not about the subject of record | |
| extension:specimen |
0..* | Extension | The specimen used in the analysis event | |
| url |
1..1 | uri | "specimen" | |
| value[x] |
0..1 | Reference() | The specimen used in the analysis event | |
| extension:date |
0..1 | Extension | The date of the analysis event | |
| url |
1..1 | uri | "date" | |
| value[x] |
0..1 | dateTime | The date of the analysis event | |
| extension:note |
0..* | Extension | Any notes capture with the analysis event | |
| url |
1..1 | uri | "note" | |
| value[x] |
0..1 | Annotation | Any notes capture with the analysis event | |
| extension:protocolPerformed |
0..1 | Extension | The protocol that was performed for the analysis event | |
| url |
1..1 | uri | "protocolPerformed" | |
| value[x] |
0..1 | Reference() | The protocol that was performed for the analysis event | |
| extension:regionsStudied |
0..* | Extension | The genomic regions to be studied in the analysis (BED file) | |
| url |
1..1 | uri | "regionsStudied" | |
| value[x] |
0..1 | Reference() | The genomic regions to be studied in the analysis (BED file) | |
| extension:regionsCalled |
0..* | Extension | Genomic regions actually called in the analysis event (BED file) | |
| url |
1..1 | uri | "regionsCalled" | |
| value[x] |
0..1 | Reference() | Genomic regions actually called in the analysis event (BED file) | |
| extension:input |
0..* | Extension | Inputs for the analysis event | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:file |
0..1 | Extension | File containing input data | |
| url |
1..1 | uri | "file" | |
| value[x] |
0..1 | Reference() | File containing input data | |
| extension:type |
0..1 | Extension | Type of input data (e.g., BAM, CRAM, or FASTA) | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | Type of input data (e.g., BAM, CRAM, or FASTA) Binding: R5_genomicstudy_dataformat_for_R4 (0.0.1-snapshot-2) (example): The data format of the data file. | |
| extension:generatedBy[x] |
0..1 | Extension | The analysis event or other GenomicStudy that generated this input file | |
| url |
1..1 | uri | "generatedBy[x]" | |
  value[x] |
0..1 | The analysis event or other GenomicStudy that generated this input file | ||
 valueIdentifier |
Identifier | |||
 valueReference |
Reference(Any) | |||
| url |
1..1 | uri | "input" | |
| extension:output |
0..* | Extension | Outputs for the analysis event | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:file |
0..1 | Extension | File containing output data | |
| url |
1..1 | uri | "file" | |
| value[x] |
0..1 | Reference() | File containing output data | |
| extension:type |
0..1 | Extension | Type of output data (e.g., VCF, MAF, or BAM) | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | Type of output data (e.g., VCF, MAF, or BAM) Binding: R5_genomicstudy_dataformat_for_R4 (0.0.1-snapshot-2) (example): The data format of the data file. | |
| url |
1..1 | uri | "output" | |
| extension:performer |
0..* | Extension | Performer for the analysis event | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:actor |
0..1 | Extension | The organization, healthcare professional, or others who participated in performing this analysis | |
| url |
1..1 | uri | "actor" | |
| value[x] |
0..1 | Reference() | The organization, healthcare professional, or others who participated in performing this analysis | |
| extension:role |
0..1 | Extension | Role of the actor for this analysis | |
| url |
1..1 | uri | "role" | |
| value[x] |
0..1 | CodeableConcept | Role of the actor for this analysis | |
| url |
1..1 | uri | "performer" | |
| extension:device |
0..* | Extension | Devices used for the analysis (e.g., instruments, software), with settings and parameters | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:device |
0..1 | Extension | Device used for the analysis | |
| url |
1..1 | uri | "device" | |
| value[x] |
0..1 | Reference() | Device used for the analysis | |
| extension:function |
0..1 | Extension | Specific function for the device used for the analysis | |
| url |
1..1 | uri | "function" | |
| value[x] |
0..1 | CodeableConcept | Specific function for the device used for the analysis | |
| url |
1..1 | uri | "device" | |
| url |
1..1 | uri | "analysis" | |
| url |
1..1 | uri | "http://hl7.org/fhir/5.0/StructureDefinition/extension-GenomicStudy" | |
| Documentation for this format | ||||
| Name | Flags | Card. | Type | Description & Constraints Filter: |
|---|---|---|---|---|
| Extension |
0..* | Extension(4.0.1) | Genomic Study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
1..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:status |
1..1 | Extension | registered | available | cancelled | entered-in-error | unknown Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
 extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "status" | |
| value[x] |
0..1 | code | registered | available | cancelled | entered-in-error | unknown Binding: R5_genomicstudy_status_for_R4 (0.0.1-snapshot-2) (required): The status of the GenomicStudy. | |
| extension:type |
0..* | Extension | The type of the study (e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | The type of the study (e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling) Binding: R5_genomicstudy_type_for_R4 (0.0.1-snapshot-2) (example): The type relevant to GenomicStudy. | |
| extension:encounter |
0..1 | Extension | The healthcare event with which this genomics study is associated Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "encounter" | |
| value[x] |
0..1 | Reference() | The healthcare event with which this genomics study is associated | |
| extension:startDate |
0..1 | Extension | When the genomic study was started Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "startDate" | |
| value[x] |
0..1 | dateTime | When the genomic study was started | |
| extension:basedOn |
0..* | Extension | Event resources that the genomic study is based on Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "basedOn" | |
| value[x] |
0..1 | Reference() | Event resources that the genomic study is based on | |
| extension:referrer |
0..1 | Extension | Healthcare professional who requested or referred the genomic study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "referrer" | |
| value[x] |
0..1 | Reference() | Healthcare professional who requested or referred the genomic study | |
| extension:interpreter |
0..* | Extension | Healthcare professionals who interpreted the genomic study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "interpreter" | |
| value[x] |
0..1 | Reference() | Healthcare professionals who interpreted the genomic study | |
| extension:reason |
0..* | Extension | Why the genomic study was performed Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:concept |
0..1 | Extension | Reference to a concept (by class) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "concept" | |
| value[x] |
0..1 | CodeableConcept | Reference to a concept (by class) | |
| extension:reference |
0..1 | Extension | Reference to a resource (by instance) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "reference" | |
| value[x] |
0..1 | Reference() | Reference to a resource (by instance) | |
| extension:_datatype |
0..1 | (Complex) | Data type name for GenomicStudy.reason from FHIR R5 URL: http://hl7.org/fhir/StructureDefinition/_datatype Constraints: ext-1 | |
| id |
0..1 | id | Unique id for inter-element referencing | |
| extension |
0..0 | |||
| url |
1..1 | uri | "http://hl7.org/fhir/StructureDefinition/_datatype" | |
| value[x] |
1..1 | string | Value of extension Fixed Value: CodeableReference | |
| url |
1..1 | uri | "reason" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| extension:instantiatesCanonical |
0..1 | Extension | The defined protocol that describes the study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "instantiatesCanonical" | |
| value[x] |
0..1 | canonical() | The defined protocol that describes the study | |
| extension:instantiatesUri |
0..1 | Extension | The URL pointing to an externally maintained protocol that describes the study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "instantiatesUri" | |
| value[x] |
0..1 | uri | The URL pointing to an externally maintained protocol that describes the study | |
| extension:note |
0..* | Extension | Comments related to the genomic study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "note" | |
| value[x] |
0..1 | Annotation | Comments related to the genomic study | |
| extension:description |
0..1 | Extension | Description of the genomic study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "description" | |
| value[x] |
0..1 | markdown | Description of the genomic study | |
| extension:analysis |
0..* | Extension | Genomic Analysis Event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:identifier |
0..* | Extension | Identifiers for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "identifier" | |
| value[x] |
0..1 | Identifier | Identifiers for the analysis event | |
| extension:methodType |
0..* | Extension | Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "methodType" | |
| value[x] |
0..1 | CodeableConcept | Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) Binding: R5_genomicstudy_methodtype_for_R4 (0.0.1-snapshot-2) (example): The method type of the GenomicStudy analysis. | |
| extension:changeType |
0..* | Extension | Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "changeType" | |
| value[x] |
0..1 | CodeableConcept | Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) Binding: R5_genomicstudy_changetype_for_R4 (0.0.1-snapshot-2) (example): The change type relevant to GenomicStudy analysis. | |
| extension:genomeBuild |
0..1 | Extension | Genome build that is used in this analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "genomeBuild" | |
| value[x] |
0..1 | CodeableConcept | Genome build that is used in this analysis Binding: AccountStatus (extensible): Human reference sequence NCBI build ID | |
| extension:instantiatesCanonical |
0..1 | Extension | The defined protocol that describes the analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "instantiatesCanonical" | |
| value[x] |
0..1 | canonical() | The defined protocol that describes the analysis | |
| extension:instantiatesUri |
0..1 | Extension | The URL pointing to an externally maintained protocol that describes the analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "instantiatesUri" | |
| value[x] |
0..1 | uri | The URL pointing to an externally maintained protocol that describes the analysis | |
| extension:title |
0..1 | Extension | Name of the analysis event (human friendly) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "title" | |
| value[x] |
0..1 | string | Name of the analysis event (human friendly) | |
| extension:focus |
0..* | Extension | What the genomic analysis is about, when it is not about the subject of record Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "focus" | |
| value[x] |
0..1 | Reference() | What the genomic analysis is about, when it is not about the subject of record | |
| extension:specimen |
0..* | Extension | The specimen used in the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "specimen" | |
| value[x] |
0..1 | Reference() | The specimen used in the analysis event | |
| extension:date |
0..1 | Extension | The date of the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "date" | |
| value[x] |
0..1 | dateTime | The date of the analysis event | |
| extension:note |
0..* | Extension | Any notes capture with the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "note" | |
| value[x] |
0..1 | Annotation | Any notes capture with the analysis event | |
| extension:protocolPerformed |
0..1 | Extension | The protocol that was performed for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "protocolPerformed" | |
| value[x] |
0..1 | Reference() | The protocol that was performed for the analysis event | |
| extension:regionsStudied |
0..* | Extension | The genomic regions to be studied in the analysis (BED file) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "regionsStudied" | |
| value[x] |
0..1 | Reference() | The genomic regions to be studied in the analysis (BED file) | |
| extension:regionsCalled |
0..* | Extension | Genomic regions actually called in the analysis event (BED file) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "regionsCalled" | |
| value[x] |
0..1 | Reference() | Genomic regions actually called in the analysis event (BED file) | |
| extension:input |
0..* | Extension | Inputs for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:file |
0..1 | Extension | File containing input data Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "file" | |
| value[x] |
0..1 | Reference() | File containing input data | |
| extension:type |
0..1 | Extension | Type of input data (e.g., BAM, CRAM, or FASTA) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | Type of input data (e.g., BAM, CRAM, or FASTA) Binding: R5_genomicstudy_dataformat_for_R4 (0.0.1-snapshot-2) (example): The data format of the data file. | |
| extension:generatedBy[x] |
0..1 | Extension | The analysis event or other GenomicStudy that generated this input file Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "generatedBy[x]" | |
| value[x] |
0..1 | The analysis event or other GenomicStudy that generated this input file | ||
| valueIdentifier |
Identifier | |||
| valueReference |
Reference(Any) | |||
| url |
1..1 | uri | "input" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| extension:output |
0..* | Extension | Outputs for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:file |
0..1 | Extension | File containing output data Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "file" | |
| value[x] |
0..1 | Reference() | File containing output data | |
| extension:type |
0..1 | Extension | Type of output data (e.g., VCF, MAF, or BAM) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | Type of output data (e.g., VCF, MAF, or BAM) Binding: R5_genomicstudy_dataformat_for_R4 (0.0.1-snapshot-2) (example): The data format of the data file. | |
| url |
1..1 | uri | "output" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| extension:performer |
0..* | Extension | Performer for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:actor |
0..1 | Extension | The organization, healthcare professional, or others who participated in performing this analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "actor" | |
| value[x] |
0..1 | Reference() | The organization, healthcare professional, or others who participated in performing this analysis | |
| extension:role |
0..1 | Extension | Role of the actor for this analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "role" | |
| value[x] |
0..1 | CodeableConcept | Role of the actor for this analysis | |
| url |
1..1 | uri | "performer" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| extension:device |
0..* | Extension | Devices used for the analysis (e.g., instruments, software), with settings and parameters Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:device |
0..1 | Extension | Device used for the analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "device" | |
| value[x] |
0..1 | Reference() | Device used for the analysis | |
| extension:function |
0..1 | Extension | Specific function for the device used for the analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "function" | |
| value[x] |
0..1 | CodeableConcept | Specific function for the device used for the analysis | |
| url |
1..1 | uri | "device" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| url |
1..1 | uri | "analysis" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| url |
1..1 | uri | "http://hl7.org/fhir/5.0/StructureDefinition/extension-GenomicStudy" | |
 value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| Documentation for this format | ||||
This structure is derived from Extension
Summary
Simple Extension with the type base64Binary, boolean, canonical, code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, Reference, SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage, Meta: This cross-version extension represents GenomicStudy from http://hl7.org/fhir/StructureDefinition/GenomicStudy|5.0.0 for use in FHIR R4.
Maturity: 0
Differential View
This structure is derived from Extension
| Name | Flags | Card. | Type | Description & Constraints Filter: |
|---|---|---|---|---|
| Extension |
0..* | Extension(4.0.1) | Genomic Study | |
| Slices for extension |
1..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:status |
1..1 | Extension | registered | available | cancelled | entered-in-error | unknown | |
| url |
1..1 | uri | "status" | |
| value[x] |
0..1 | code | registered | available | cancelled | entered-in-error | unknown Binding: R5_genomicstudy_status_for_R4 (0.0.1-snapshot-2) (required): The status of the GenomicStudy. | |
| extension:type |
0..* | Extension | The type of the study (e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling) | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | The type of the study (e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling) Binding: R5_genomicstudy_type_for_R4 (0.0.1-snapshot-2) (example): The type relevant to GenomicStudy. | |
| extension:encounter |
0..1 | Extension | The healthcare event with which this genomics study is associated | |
| url |
1..1 | uri | "encounter" | |
| value[x] |
0..1 | Reference() | The healthcare event with which this genomics study is associated | |
| extension:startDate |
0..1 | Extension | When the genomic study was started | |
| url |
1..1 | uri | "startDate" | |
| value[x] |
0..1 | dateTime | When the genomic study was started | |
| extension:basedOn |
0..* | Extension | Event resources that the genomic study is based on | |
| url |
1..1 | uri | "basedOn" | |
| value[x] |
0..1 | Reference() | Event resources that the genomic study is based on | |
| extension:referrer |
0..1 | Extension | Healthcare professional who requested or referred the genomic study | |
| url |
1..1 | uri | "referrer" | |
| value[x] |
0..1 | Reference() | Healthcare professional who requested or referred the genomic study | |
| extension:interpreter |
0..* | Extension | Healthcare professionals who interpreted the genomic study | |
| url |
1..1 | uri | "interpreter" | |
| value[x] |
0..1 | Reference() | Healthcare professionals who interpreted the genomic study | |
| extension:reason |
0..* | Extension | Why the genomic study was performed | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:concept |
0..1 | Extension | Reference to a concept (by class) | |
| url |
1..1 | uri | "concept" | |
| value[x] |
0..1 | CodeableConcept | Reference to a concept (by class) | |
| extension:reference |
0..1 | Extension | Reference to a resource (by instance) | |
| url |
1..1 | uri | "reference" | |
| value[x] |
0..1 | Reference() | Reference to a resource (by instance) | |
| extension:_datatype |
0..1 | (Complex) | Data type name for GenomicStudy.reason from FHIR R5 URL: http://hl7.org/fhir/StructureDefinition/_datatype | |
| value[x] |
1..1 | string | Value of extension Fixed Value: CodeableReference | |
| url |
1..1 | uri | "reason" | |
| extension:instantiatesCanonical |
0..1 | Extension | The defined protocol that describes the study | |
| url |
1..1 | uri | "instantiatesCanonical" | |
| value[x] |
0..1 | canonical() | The defined protocol that describes the study | |
| extension:instantiatesUri |
0..1 | Extension | The URL pointing to an externally maintained protocol that describes the study | |
| url |
1..1 | uri | "instantiatesUri" | |
| value[x] |
0..1 | uri | The URL pointing to an externally maintained protocol that describes the study | |
| extension:note |
0..* | Extension | Comments related to the genomic study | |
| url |
1..1 | uri | "note" | |
| value[x] |
0..1 | Annotation | Comments related to the genomic study | |
| extension:description |
0..1 | Extension | Description of the genomic study | |
| url |
1..1 | uri | "description" | |
| value[x] |
0..1 | markdown | Description of the genomic study | |
| extension:analysis |
0..* | Extension | Genomic Analysis Event | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:identifier |
0..* | Extension | Identifiers for the analysis event | |
| url |
1..1 | uri | "identifier" | |
| value[x] |
0..1 | Identifier | Identifiers for the analysis event | |
| extension:methodType |
0..* | Extension | Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) | |
| url |
1..1 | uri | "methodType" | |
| value[x] |
0..1 | CodeableConcept | Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) Binding: R5_genomicstudy_methodtype_for_R4 (0.0.1-snapshot-2) (example): The method type of the GenomicStudy analysis. | |
| extension:changeType |
0..* | Extension | Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) | |
| url |
1..1 | uri | "changeType" | |
| value[x] |
0..1 | CodeableConcept | Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) Binding: R5_genomicstudy_changetype_for_R4 (0.0.1-snapshot-2) (example): The change type relevant to GenomicStudy analysis. | |
| extension:genomeBuild |
0..1 | Extension | Genome build that is used in this analysis | |
| url |
1..1 | uri | "genomeBuild" | |
| value[x] |
0..1 | CodeableConcept | Genome build that is used in this analysis Binding: AccountStatus (extensible): Human reference sequence NCBI build ID | |
| extension:instantiatesCanonical |
0..1 | Extension | The defined protocol that describes the analysis | |
| url |
1..1 | uri | "instantiatesCanonical" | |
| value[x] |
0..1 | canonical() | The defined protocol that describes the analysis | |
| extension:instantiatesUri |
0..1 | Extension | The URL pointing to an externally maintained protocol that describes the analysis | |
| url |
1..1 | uri | "instantiatesUri" | |
| value[x] |
0..1 | uri | The URL pointing to an externally maintained protocol that describes the analysis | |
| extension:title |
0..1 | Extension | Name of the analysis event (human friendly) | |
| url |
1..1 | uri | "title" | |
| value[x] |
0..1 | string | Name of the analysis event (human friendly) | |
| extension:focus |
0..* | Extension | What the genomic analysis is about, when it is not about the subject of record | |
| url |
1..1 | uri | "focus" | |
| value[x] |
0..1 | Reference() | What the genomic analysis is about, when it is not about the subject of record | |
| extension:specimen |
0..* | Extension | The specimen used in the analysis event | |
| url |
1..1 | uri | "specimen" | |
| value[x] |
0..1 | Reference() | The specimen used in the analysis event | |
| extension:date |
0..1 | Extension | The date of the analysis event | |
| url |
1..1 | uri | "date" | |
| value[x] |
0..1 | dateTime | The date of the analysis event | |
| extension:note |
0..* | Extension | Any notes capture with the analysis event | |
| url |
1..1 | uri | "note" | |
| value[x] |
0..1 | Annotation | Any notes capture with the analysis event | |
| extension:protocolPerformed |
0..1 | Extension | The protocol that was performed for the analysis event | |
| url |
1..1 | uri | "protocolPerformed" | |
| value[x] |
0..1 | Reference() | The protocol that was performed for the analysis event | |
| extension:regionsStudied |
0..* | Extension | The genomic regions to be studied in the analysis (BED file) | |
| url |
1..1 | uri | "regionsStudied" | |
| value[x] |
0..1 | Reference() | The genomic regions to be studied in the analysis (BED file) | |
| extension:regionsCalled |
0..* | Extension | Genomic regions actually called in the analysis event (BED file) | |
| url |
1..1 | uri | "regionsCalled" | |
| value[x] |
0..1 | Reference() | Genomic regions actually called in the analysis event (BED file) | |
| extension:input |
0..* | Extension | Inputs for the analysis event | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:file |
0..1 | Extension | File containing input data | |
| url |
1..1 | uri | "file" | |
| value[x] |
0..1 | Reference() | File containing input data | |
| extension:type |
0..1 | Extension | Type of input data (e.g., BAM, CRAM, or FASTA) | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | Type of input data (e.g., BAM, CRAM, or FASTA) Binding: R5_genomicstudy_dataformat_for_R4 (0.0.1-snapshot-2) (example): The data format of the data file. | |
| extension:generatedBy[x] |
0..1 | Extension | The analysis event or other GenomicStudy that generated this input file | |
| url |
1..1 | uri | "generatedBy[x]" | |
| value[x] |
0..1 | The analysis event or other GenomicStudy that generated this input file | ||
| valueIdentifier |
Identifier | |||
| valueReference |
Reference(Any) | |||
| url |
1..1 | uri | "input" | |
| extension:output |
0..* | Extension | Outputs for the analysis event | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:file |
0..1 | Extension | File containing output data | |
| url |
1..1 | uri | "file" | |
| value[x] |
0..1 | Reference() | File containing output data | |
| extension:type |
0..1 | Extension | Type of output data (e.g., VCF, MAF, or BAM) | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | Type of output data (e.g., VCF, MAF, or BAM) Binding: R5_genomicstudy_dataformat_for_R4 (0.0.1-snapshot-2) (example): The data format of the data file. | |
| url |
1..1 | uri | "output" | |
| extension:performer |
0..* | Extension | Performer for the analysis event | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:actor |
0..1 | Extension | The organization, healthcare professional, or others who participated in performing this analysis | |
| url |
1..1 | uri | "actor" | |
| value[x] |
0..1 | Reference() | The organization, healthcare professional, or others who participated in performing this analysis | |
| extension:role |
0..1 | Extension | Role of the actor for this analysis | |
| url |
1..1 | uri | "role" | |
| value[x] |
0..1 | CodeableConcept | Role of the actor for this analysis | |
| url |
1..1 | uri | "performer" | |
| extension:device |
0..* | Extension | Devices used for the analysis (e.g., instruments, software), with settings and parameters | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url | |
| extension:device |
0..1 | Extension | Device used for the analysis | |
| url |
1..1 | uri | "device" | |
| value[x] |
0..1 | Reference() | Device used for the analysis | |
| extension:function |
0..1 | Extension | Specific function for the device used for the analysis | |
| url |
1..1 | uri | "function" | |
| value[x] |
0..1 | CodeableConcept | Specific function for the device used for the analysis | |
| url |
1..1 | uri | "device" | |
| url |
1..1 | uri | "analysis" | |
| url |
1..1 | uri | "http://hl7.org/fhir/5.0/StructureDefinition/extension-GenomicStudy" | |
| Documentation for this format | ||||
Snapshot View
| Name | Flags | Card. | Type | Description & Constraints Filter: |
|---|---|---|---|---|
| Extension |
0..* | Extension(4.0.1) | Genomic Study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
1..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:status |
1..1 | Extension | registered | available | cancelled | entered-in-error | unknown Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "status" | |
| value[x] |
0..1 | code | registered | available | cancelled | entered-in-error | unknown Binding: R5_genomicstudy_status_for_R4 (0.0.1-snapshot-2) (required): The status of the GenomicStudy. | |
| extension:type |
0..* | Extension | The type of the study (e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | The type of the study (e.g., Familial variant segregation, Functional variation detection, or Gene expression profiling) Binding: R5_genomicstudy_type_for_R4 (0.0.1-snapshot-2) (example): The type relevant to GenomicStudy. | |
| extension:encounter |
0..1 | Extension | The healthcare event with which this genomics study is associated Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "encounter" | |
| value[x] |
0..1 | Reference() | The healthcare event with which this genomics study is associated | |
| extension:startDate |
0..1 | Extension | When the genomic study was started Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "startDate" | |
| value[x] |
0..1 | dateTime | When the genomic study was started | |
| extension:basedOn |
0..* | Extension | Event resources that the genomic study is based on Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "basedOn" | |
| value[x] |
0..1 | Reference() | Event resources that the genomic study is based on | |
| extension:referrer |
0..1 | Extension | Healthcare professional who requested or referred the genomic study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "referrer" | |
| value[x] |
0..1 | Reference() | Healthcare professional who requested or referred the genomic study | |
| extension:interpreter |
0..* | Extension | Healthcare professionals who interpreted the genomic study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "interpreter" | |
| value[x] |
0..1 | Reference() | Healthcare professionals who interpreted the genomic study | |
| extension:reason |
0..* | Extension | Why the genomic study was performed Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:concept |
0..1 | Extension | Reference to a concept (by class) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "concept" | |
| value[x] |
0..1 | CodeableConcept | Reference to a concept (by class) | |
| extension:reference |
0..1 | Extension | Reference to a resource (by instance) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "reference" | |
| value[x] |
0..1 | Reference() | Reference to a resource (by instance) | |
| extension:_datatype |
0..1 | (Complex) | Data type name for GenomicStudy.reason from FHIR R5 URL: http://hl7.org/fhir/StructureDefinition/_datatype Constraints: ext-1 | |
| id |
0..1 | id | Unique id for inter-element referencing | |
| extension |
0..0 | |||
| url |
1..1 | uri | "http://hl7.org/fhir/StructureDefinition/_datatype" | |
| value[x] |
1..1 | string | Value of extension Fixed Value: CodeableReference | |
| url |
1..1 | uri | "reason" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| extension:instantiatesCanonical |
0..1 | Extension | The defined protocol that describes the study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "instantiatesCanonical" | |
| value[x] |
0..1 | canonical() | The defined protocol that describes the study | |
| extension:instantiatesUri |
0..1 | Extension | The URL pointing to an externally maintained protocol that describes the study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "instantiatesUri" | |
| value[x] |
0..1 | uri | The URL pointing to an externally maintained protocol that describes the study | |
| extension:note |
0..* | Extension | Comments related to the genomic study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "note" | |
| value[x] |
0..1 | Annotation | Comments related to the genomic study | |
| extension:description |
0..1 | Extension | Description of the genomic study Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "description" | |
| value[x] |
0..1 | markdown | Description of the genomic study | |
| extension:analysis |
0..* | Extension | Genomic Analysis Event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:identifier |
0..* | Extension | Identifiers for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "identifier" | |
| value[x] |
0..1 | Identifier | Identifiers for the analysis event | |
| extension:methodType |
0..* | Extension | Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "methodType" | |
| value[x] |
0..1 | CodeableConcept | Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) Binding: R5_genomicstudy_methodtype_for_R4 (0.0.1-snapshot-2) (example): The method type of the GenomicStudy analysis. | |
| extension:changeType |
0..* | Extension | Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "changeType" | |
| value[x] |
0..1 | CodeableConcept | Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) Binding: R5_genomicstudy_changetype_for_R4 (0.0.1-snapshot-2) (example): The change type relevant to GenomicStudy analysis. | |
| extension:genomeBuild |
0..1 | Extension | Genome build that is used in this analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "genomeBuild" | |
| value[x] |
0..1 | CodeableConcept | Genome build that is used in this analysis Binding: AccountStatus (extensible): Human reference sequence NCBI build ID | |
| extension:instantiatesCanonical |
0..1 | Extension | The defined protocol that describes the analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "instantiatesCanonical" | |
| value[x] |
0..1 | canonical() | The defined protocol that describes the analysis | |
| extension:instantiatesUri |
0..1 | Extension | The URL pointing to an externally maintained protocol that describes the analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "instantiatesUri" | |
| value[x] |
0..1 | uri | The URL pointing to an externally maintained protocol that describes the analysis | |
| extension:title |
0..1 | Extension | Name of the analysis event (human friendly) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "title" | |
| value[x] |
0..1 | string | Name of the analysis event (human friendly) | |
| extension:focus |
0..* | Extension | What the genomic analysis is about, when it is not about the subject of record Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "focus" | |
| value[x] |
0..1 | Reference() | What the genomic analysis is about, when it is not about the subject of record | |
| extension:specimen |
0..* | Extension | The specimen used in the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "specimen" | |
| value[x] |
0..1 | Reference() | The specimen used in the analysis event | |
| extension:date |
0..1 | Extension | The date of the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "date" | |
| value[x] |
0..1 | dateTime | The date of the analysis event | |
| extension:note |
0..* | Extension | Any notes capture with the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "note" | |
| value[x] |
0..1 | Annotation | Any notes capture with the analysis event | |
| extension:protocolPerformed |
0..1 | Extension | The protocol that was performed for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "protocolPerformed" | |
| value[x] |
0..1 | Reference() | The protocol that was performed for the analysis event | |
| extension:regionsStudied |
0..* | Extension | The genomic regions to be studied in the analysis (BED file) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "regionsStudied" | |
| value[x] |
0..1 | Reference() | The genomic regions to be studied in the analysis (BED file) | |
| extension:regionsCalled |
0..* | Extension | Genomic regions actually called in the analysis event (BED file) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "regionsCalled" | |
| value[x] |
0..1 | Reference() | Genomic regions actually called in the analysis event (BED file) | |
| extension:input |
0..* | Extension | Inputs for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:file |
0..1 | Extension | File containing input data Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "file" | |
| value[x] |
0..1 | Reference() | File containing input data | |
| extension:type |
0..1 | Extension | Type of input data (e.g., BAM, CRAM, or FASTA) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | Type of input data (e.g., BAM, CRAM, or FASTA) Binding: R5_genomicstudy_dataformat_for_R4 (0.0.1-snapshot-2) (example): The data format of the data file. | |
| extension:generatedBy[x] |
0..1 | Extension | The analysis event or other GenomicStudy that generated this input file Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "generatedBy[x]" | |
| value[x] |
0..1 | The analysis event or other GenomicStudy that generated this input file | ||
| valueIdentifier |
Identifier | |||
| valueReference |
Reference(Any) | |||
| url |
1..1 | uri | "input" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| extension:output |
0..* | Extension | Outputs for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:file |
0..1 | Extension | File containing output data Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "file" | |
| value[x] |
0..1 | Reference() | File containing output data | |
| extension:type |
0..1 | Extension | Type of output data (e.g., VCF, MAF, or BAM) Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "type" | |
| value[x] |
0..1 | CodeableConcept | Type of output data (e.g., VCF, MAF, or BAM) Binding: R5_genomicstudy_dataformat_for_R4 (0.0.1-snapshot-2) (example): The data format of the data file. | |
| url |
1..1 | uri | "output" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| extension:performer |
0..* | Extension | Performer for the analysis event Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:actor |
0..1 | Extension | The organization, healthcare professional, or others who participated in performing this analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "actor" | |
| value[x] |
0..1 | Reference() | The organization, healthcare professional, or others who participated in performing this analysis | |
| extension:role |
0..1 | Extension | Role of the actor for this analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "role" | |
| value[x] |
0..1 | CodeableConcept | Role of the actor for this analysis | |
| url |
1..1 | uri | "performer" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| extension:device |
0..* | Extension | Devices used for the analysis (e.g., instruments, software), with settings and parameters Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| Slices for extension |
0..* | Extension | Extension Slice: Unordered, Closed by value:url Constraints: ext-1 | |
| extension:device |
0..1 | Extension | Device used for the analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "device" | |
| value[x] |
0..1 | Reference() | Device used for the analysis | |
| extension:function |
0..1 | Extension | Specific function for the device used for the analysis Constraints: ext-1 | |
| id |
0..1 | string | Unique id for inter-element referencing | |
| extension |
0..* | Extension | Additional content defined by implementations Slice: Unordered, Open by value:url Constraints: ext-1 | |
| url |
1..1 | uri | "function" | |
| value[x] |
0..1 | CodeableConcept | Specific function for the device used for the analysis | |
| url |
1..1 | uri | "device" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| url |
1..1 | uri | "analysis" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| url |
1..1 | uri | "http://hl7.org/fhir/5.0/StructureDefinition/extension-GenomicStudy" | |
| value[x] |
0..1 | Value of extension | ||
| valueBase64Binary |
base64Binary | |||
| valueBoolean |
boolean | |||
| valueCanonical |
canonical(Any) | |||
| valueCode |
code | |||
| valueDate |
date | |||
| valueDateTime |
dateTime | |||
| valueDecimal |
decimal | |||
| valueId |
id | |||
| valueInstant |
instant | |||
| valueInteger |
integer | |||
| valueMarkdown |
markdown | |||
| valueOid |
oid | |||
| valuePositiveInt |
positiveInt | |||
| valueString |
string | |||
| valueTime |
time | |||
| valueUnsignedInt |
unsignedInt | |||
| valueUri |
uri | |||
| valueUrl |
url | |||
| valueUuid |
uuid | |||
| valueAddress |
Address | |||
| valueAge |
Age | |||
| valueAnnotation |
Annotation | |||
| valueAttachment |
Attachment | |||
| valueCodeableConcept |
CodeableConcept | |||
| valueCoding |
Coding | |||
| valueContactPoint |
ContactPoint | |||
| valueCount |
Count | |||
| valueDistance |
Distance | |||
| valueDuration |
Duration | |||
| valueHumanName |
HumanName | |||
| valueIdentifier |
Identifier | |||
| valueMoney |
Money | |||
| valuePeriod |
Period | |||
| valueQuantity |
Quantity | |||
| valueRange |
Range | |||
| valueRatio |
Ratio | |||
| valueReference |
Reference(Any) | |||
| valueSampledData |
SampledData | |||
| valueSignature |
Signature | |||
| valueTiming |
Timing | |||
| valueContactDetail |
ContactDetail | |||
| valueContributor |
Contributor | |||
| valueDataRequirement |
DataRequirement | |||
| valueExpression |
Expression | |||
| valueParameterDefinition |
ParameterDefinition | |||
| valueRelatedArtifact |
RelatedArtifact | |||
| valueTriggerDefinition |
TriggerDefinition | |||
| valueUsageContext |
UsageContext | |||
| valueDosage |
Dosage | |||
| valueMeta |
Meta | |||
| Documentation for this format | ||||
Other representations of profile: CSV, Excel, Schematron
| Path | Conformance | ValueSet | URI |
| Extension.extension:status.value[x] | required | R5_genomicstudy_status_for_R4http://hl7.org/fhir/5.0/ValueSet/R5-genomicstudy-status-for-R4|0.0.1-snapshot-2From this IG | |
| Extension.extension:type.value[x] | example | R5_genomicstudy_type_for_R4http://hl7.org/fhir/5.0/ValueSet/R5-genomicstudy-type-for-R4|0.0.1-snapshot-2From this IG | |
| Extension.extension:analysis.extension:methodType.value[x] | example | R5_genomicstudy_methodtype_for_R4http://hl7.org/fhir/5.0/ValueSet/R5-genomicstudy-methodtype-for-R4|0.0.1-snapshot-2From this IG | |
| Extension.extension:analysis.extension:changeType.value[x] | example | R5_genomicstudy_changetype_for_R4http://hl7.org/fhir/5.0/ValueSet/R5-genomicstudy-changetype-for-R4|0.0.1-snapshot-2From this IG | |
| Extension.extension:analysis.extension:genomeBuild.value[x] | extensible | AccountStatus(a valid code from Account Status)http://hl7.org/fhir/ValueSet/account-status|4.0.1From the FHIR Standard | |
| Extension.extension:analysis.extension:input.extension:type.value[x] | example | R5_genomicstudy_dataformat_for_R4http://hl7.org/fhir/5.0/ValueSet/R5-genomicstudy-dataformat-for-R4|0.0.1-snapshot-2From this IG | |
| Extension.extension:analysis.extension:output.extension:type.value[x] | example | R5_genomicstudy_dataformat_for_R4http://hl7.org/fhir/5.0/ValueSet/R5-genomicstudy-dataformat-for-R4|0.0.1-snapshot-2From this IG |
| Id | Grade | Path(s) | Details | Requirements |
| ele-1 | error | Extension, Extension.extension, Extension.extension:status, Extension.extension:status.extension, Extension.extension:status.value[x], Extension.extension:type, Extension.extension:type.extension, Extension.extension:type.value[x], Extension.extension:encounter, Extension.extension:encounter.extension, Extension.extension:encounter.value[x], Extension.extension:startDate, Extension.extension:startDate.extension, Extension.extension:startDate.value[x], Extension.extension:basedOn, Extension.extension:basedOn.extension, Extension.extension:basedOn.value[x], Extension.extension:referrer, Extension.extension:referrer.extension, Extension.extension:referrer.value[x], Extension.extension:interpreter, Extension.extension:interpreter.extension, Extension.extension:interpreter.value[x], Extension.extension:reason, Extension.extension:reason.extension, Extension.extension:reason.extension:concept, Extension.extension:reason.extension:concept.extension, Extension.extension:reason.extension:concept.value[x], Extension.extension:reason.extension:reference, Extension.extension:reason.extension:reference.extension, Extension.extension:reason.extension:reference.value[x], Extension.extension:reason.extension:_datatype, Extension.extension:reason.extension:_datatype.value[x], Extension.extension:reason.value[x], Extension.extension:instantiatesCanonical, Extension.extension:instantiatesCanonical.extension, Extension.extension:instantiatesCanonical.value[x], Extension.extension:instantiatesUri, Extension.extension:instantiatesUri.extension, Extension.extension:instantiatesUri.value[x], Extension.extension:note, Extension.extension:note.extension, Extension.extension:note.value[x], Extension.extension:description, Extension.extension:description.extension, Extension.extension:description.value[x], Extension.extension:analysis, Extension.extension:analysis.extension, Extension.extension:analysis.extension:identifier, Extension.extension:analysis.extension:identifier.extension, Extension.extension:analysis.extension:identifier.value[x], Extension.extension:analysis.extension:methodType, Extension.extension:analysis.extension:methodType.extension, Extension.extension:analysis.extension:methodType.value[x], Extension.extension:analysis.extension:changeType, Extension.extension:analysis.extension:changeType.extension, Extension.extension:analysis.extension:changeType.value[x], Extension.extension:analysis.extension:genomeBuild, Extension.extension:analysis.extension:genomeBuild.extension, Extension.extension:analysis.extension:genomeBuild.value[x], Extension.extension:analysis.extension:instantiatesCanonical, Extension.extension:analysis.extension:instantiatesCanonical.extension, Extension.extension:analysis.extension:instantiatesCanonical.value[x], Extension.extension:analysis.extension:instantiatesUri, Extension.extension:analysis.extension:instantiatesUri.extension, Extension.extension:analysis.extension:instantiatesUri.value[x], Extension.extension:analysis.extension:title, Extension.extension:analysis.extension:title.extension, Extension.extension:analysis.extension:title.value[x], Extension.extension:analysis.extension:focus, Extension.extension:analysis.extension:focus.extension, Extension.extension:analysis.extension:focus.value[x], Extension.extension:analysis.extension:specimen, Extension.extension:analysis.extension:specimen.extension, Extension.extension:analysis.extension:specimen.value[x], Extension.extension:analysis.extension:date, Extension.extension:analysis.extension:date.extension, Extension.extension:analysis.extension:date.value[x], Extension.extension:analysis.extension:note, Extension.extension:analysis.extension:note.extension, Extension.extension:analysis.extension:note.value[x], Extension.extension:analysis.extension:protocolPerformed, Extension.extension:analysis.extension:protocolPerformed.extension, Extension.extension:analysis.extension:protocolPerformed.value[x], Extension.extension:analysis.extension:regionsStudied, Extension.extension:analysis.extension:regionsStudied.extension, Extension.extension:analysis.extension:regionsStudied.value[x], Extension.extension:analysis.extension:regionsCalled, Extension.extension:analysis.extension:regionsCalled.extension, Extension.extension:analysis.extension:regionsCalled.value[x], Extension.extension:analysis.extension:input, Extension.extension:analysis.extension:input.extension, Extension.extension:analysis.extension:input.extension:file, Extension.extension:analysis.extension:input.extension:file.extension, Extension.extension:analysis.extension:input.extension:file.value[x], Extension.extension:analysis.extension:input.extension:type, Extension.extension:analysis.extension:input.extension:type.extension, Extension.extension:analysis.extension:input.extension:type.value[x], Extension.extension:analysis.extension:input.extension:generatedBy[x], Extension.extension:analysis.extension:input.extension:generatedBy[x].extension, Extension.extension:analysis.extension:input.extension:generatedBy[x].value[x], Extension.extension:analysis.extension:input.value[x], Extension.extension:analysis.extension:output, Extension.extension:analysis.extension:output.extension, Extension.extension:analysis.extension:output.extension:file, Extension.extension:analysis.extension:output.extension:file.extension, Extension.extension:analysis.extension:output.extension:file.value[x], Extension.extension:analysis.extension:output.extension:type, Extension.extension:analysis.extension:output.extension:type.extension, Extension.extension:analysis.extension:output.extension:type.value[x], Extension.extension:analysis.extension:output.value[x], Extension.extension:analysis.extension:performer, Extension.extension:analysis.extension:performer.extension, Extension.extension:analysis.extension:performer.extension:actor, Extension.extension:analysis.extension:performer.extension:actor.extension, Extension.extension:analysis.extension:performer.extension:actor.value[x], Extension.extension:analysis.extension:performer.extension:role, Extension.extension:analysis.extension:performer.extension:role.extension, Extension.extension:analysis.extension:performer.extension:role.value[x], Extension.extension:analysis.extension:performer.value[x], Extension.extension:analysis.extension:device, Extension.extension:analysis.extension:device.extension, Extension.extension:analysis.extension:device.extension:device, Extension.extension:analysis.extension:device.extension:device.extension, Extension.extension:analysis.extension:device.extension:device.value[x], Extension.extension:analysis.extension:device.extension:function, Extension.extension:analysis.extension:device.extension:function.extension, Extension.extension:analysis.extension:device.extension:function.value[x], Extension.extension:analysis.extension:device.value[x], Extension.extension:analysis.value[x], Extension.value[x] | All FHIR elements must have a @value or children : hasValue() or (children().count() > id.count()) | |
| ext-1 | error | Extension, Extension.extension, Extension.extension:status, Extension.extension:status.extension, Extension.extension:type, Extension.extension:type.extension, Extension.extension:encounter, Extension.extension:encounter.extension, Extension.extension:startDate, Extension.extension:startDate.extension, Extension.extension:basedOn, Extension.extension:basedOn.extension, Extension.extension:referrer, Extension.extension:referrer.extension, Extension.extension:interpreter, Extension.extension:interpreter.extension, Extension.extension:reason, Extension.extension:reason.extension, Extension.extension:reason.extension:concept, Extension.extension:reason.extension:concept.extension, Extension.extension:reason.extension:reference, Extension.extension:reason.extension:reference.extension, Extension.extension:reason.extension:_datatype, Extension.extension:instantiatesCanonical, Extension.extension:instantiatesCanonical.extension, Extension.extension:instantiatesUri, Extension.extension:instantiatesUri.extension, Extension.extension:note, Extension.extension:note.extension, Extension.extension:description, Extension.extension:description.extension, Extension.extension:analysis, Extension.extension:analysis.extension, Extension.extension:analysis.extension:identifier, Extension.extension:analysis.extension:identifier.extension, Extension.extension:analysis.extension:methodType, Extension.extension:analysis.extension:methodType.extension, Extension.extension:analysis.extension:changeType, Extension.extension:analysis.extension:changeType.extension, Extension.extension:analysis.extension:genomeBuild, Extension.extension:analysis.extension:genomeBuild.extension, Extension.extension:analysis.extension:instantiatesCanonical, Extension.extension:analysis.extension:instantiatesCanonical.extension, Extension.extension:analysis.extension:instantiatesUri, Extension.extension:analysis.extension:instantiatesUri.extension, Extension.extension:analysis.extension:title, Extension.extension:analysis.extension:title.extension, Extension.extension:analysis.extension:focus, Extension.extension:analysis.extension:focus.extension, Extension.extension:analysis.extension:specimen, Extension.extension:analysis.extension:specimen.extension, Extension.extension:analysis.extension:date, Extension.extension:analysis.extension:date.extension, Extension.extension:analysis.extension:note, Extension.extension:analysis.extension:note.extension, Extension.extension:analysis.extension:protocolPerformed, Extension.extension:analysis.extension:protocolPerformed.extension, Extension.extension:analysis.extension:regionsStudied, Extension.extension:analysis.extension:regionsStudied.extension, Extension.extension:analysis.extension:regionsCalled, Extension.extension:analysis.extension:regionsCalled.extension, Extension.extension:analysis.extension:input, Extension.extension:analysis.extension:input.extension, Extension.extension:analysis.extension:input.extension:file, Extension.extension:analysis.extension:input.extension:file.extension, Extension.extension:analysis.extension:input.extension:type, Extension.extension:analysis.extension:input.extension:type.extension, Extension.extension:analysis.extension:input.extension:generatedBy[x], Extension.extension:analysis.extension:input.extension:generatedBy[x].extension, Extension.extension:analysis.extension:output, Extension.extension:analysis.extension:output.extension, Extension.extension:analysis.extension:output.extension:file, Extension.extension:analysis.extension:output.extension:file.extension, Extension.extension:analysis.extension:output.extension:type, Extension.extension:analysis.extension:output.extension:type.extension, Extension.extension:analysis.extension:performer, Extension.extension:analysis.extension:performer.extension, Extension.extension:analysis.extension:performer.extension:actor, Extension.extension:analysis.extension:performer.extension:actor.extension, Extension.extension:analysis.extension:performer.extension:role, Extension.extension:analysis.extension:performer.extension:role.extension, Extension.extension:analysis.extension:device, Extension.extension:analysis.extension:device.extension, Extension.extension:analysis.extension:device.extension:device, Extension.extension:analysis.extension:device.extension:device.extension, Extension.extension:analysis.extension:device.extension:function, Extension.extension:analysis.extension:device.extension:function.extension | Must have either extensions or value[x], not both : extension.exists() != value.exists() |
IG © 2025+ FHIR Infrastructure. Package hl7.fhir.uv.xver-r5.r4#0.0.1-snapshot-2 based on FHIR 4.0.1. Generated 2025-09-13
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