FHIR Cross-Version Extensions package for FHIR R4 from FHIR R5
0.0.1-snapshot-2 - informative International flag

FHIR Cross-Version Extensions package for FHIR R4 from FHIR R5 - Version 0.0.1-snapshot-2. See the Directory of published versions

ValueSet: Cross-version VS for R5.GenomicStudyMethodType for use in FHIR R4

Official URL: http://hl7.org/fhir/5.0/ValueSet/R5-genomicstudy-methodtype-for-R4 Version: 0.0.1-snapshot-2
Standards status: Informative Maturity Level: 1 Responsible: Clinical Genomics Computable Name: R5_genomicstudy_methodtype_for_R4

This cross-version ValueSet represents concepts from http://hl7.org/fhir/ValueSet/genomicstudy-methodtype 5.0.0 for use in FHIR R4. Concepts not present here have direct equivalent mappings crossing all versions from R5 to R4.

References

Logical Definition (CLD)

 

Expansion

This value set expansion contains 81 concepts.

CodeSystemDisplay
  biochemical-geneticshttp://hl7.org/fhir/genomicstudy-methodtypeBiochemical Genetics
  cytogeneticshttp://hl7.org/fhir/genomicstudy-methodtypeCytogenetics
  molecular-geneticshttp://hl7.org/fhir/genomicstudy-methodtypeMolecular Genetics
  analytehttp://hl7.org/fhir/genomicstudy-methodtypeAnalyte
  chromosome-breakage-studieshttp://hl7.org/fhir/genomicstudy-methodtypeChromosome breakage studies
  deletion-duplication-analysishttp://hl7.org/fhir/genomicstudy-methodtypeDeletion/duplication analysis
  detection-of-homozygosityhttp://hl7.org/fhir/genomicstudy-methodtypeDetection of homozygosity
  enzyme-assayhttp://hl7.org/fhir/genomicstudy-methodtypeEnzyme assay
  fish-interphasehttp://hl7.org/fhir/genomicstudy-methodtypeFISH-interphase
  fish-metaphasehttp://hl7.org/fhir/genomicstudy-methodtypeFISH-metaphase
  flow-cytometryhttp://hl7.org/fhir/genomicstudy-methodtypeFlow cytometry
  fishhttp://hl7.org/fhir/genomicstudy-methodtypeFluorescence in situ hybridization (FISH)
  immunohistochemistryhttp://hl7.org/fhir/genomicstudy-methodtypeImmunohistochemistry
  karyotypinghttp://hl7.org/fhir/genomicstudy-methodtypeKaryotyping
  linkage-analysishttp://hl7.org/fhir/genomicstudy-methodtypeLinkage analysis
  methylation-analysishttp://hl7.org/fhir/genomicstudy-methodtypeMethylation analysis
  msihttp://hl7.org/fhir/genomicstudy-methodtypeMicrosatellite instability testing (MSI)
  m-fishhttp://hl7.org/fhir/genomicstudy-methodtypeMulticolor FISH (M-FISH)
  mutation-scanning-of-select-exonshttp://hl7.org/fhir/genomicstudy-methodtypeMutation scanning of select exons
  mutation-scanning-of-the-entire-coding-regionhttp://hl7.org/fhir/genomicstudy-methodtypeMutation scanning of the entire coding region
  protein-analysishttp://hl7.org/fhir/genomicstudy-methodtypeProtein analysis
  protein-expressionhttp://hl7.org/fhir/genomicstudy-methodtypeProtein expression
  rna-analysishttp://hl7.org/fhir/genomicstudy-methodtypeRNA analysis
  sequence-analysis-of-select-exonshttp://hl7.org/fhir/genomicstudy-methodtypeSequence analysis of select exons
  sequence-analysis-of-the-entire-coding-regionhttp://hl7.org/fhir/genomicstudy-methodtypeSequence analysis of the entire coding region
  sister-chromatid-exchangehttp://hl7.org/fhir/genomicstudy-methodtypeSister chromatid exchange
  targeted-variant-analysishttp://hl7.org/fhir/genomicstudy-methodtypeTargeted variant analysis
  udphttp://hl7.org/fhir/genomicstudy-methodtypeUniparental disomy study (UPD)
  aspehttp://hl7.org/fhir/genomicstudy-methodtypeAllele-specific primer extension (ASPE)
  alternative-splicing-detectionhttp://hl7.org/fhir/genomicstudy-methodtypeAlternative splicing detection
  bi-directional-sanger-sequence-analysishttp://hl7.org/fhir/genomicstudy-methodtypeBi-directional Sanger Sequence Analysis
  c-bandinghttp://hl7.org/fhir/genomicstudy-methodtypeC-banding
  ciahttp://hl7.org/fhir/genomicstudy-methodtypeChemiluminescent Immunoassay (CIA)
  chromatin-immunoprecipitation-on-chiphttp://hl7.org/fhir/genomicstudy-methodtypeChromatin Immunoprecipitation on ChIP
  comparative-genomic-hybridizationhttp://hl7.org/fhir/genomicstudy-methodtypeComparative Genomic Hybridization
  damidhttp://hl7.org/fhir/genomicstudy-methodtypeDamID
  digital-virtual-karyotypinghttp://hl7.org/fhir/genomicstudy-methodtypeDigital / Virtual karyotyping
  digital-microfluidic-microsphereshttp://hl7.org/fhir/genomicstudy-methodtypeDigital microfluidic microspheres
  enzymatic-levelshttp://hl7.org/fhir/genomicstudy-methodtypeEnzymatic levels
  enzyme-activityhttp://hl7.org/fhir/genomicstudy-methodtypeEnzyme activity
  elisahttp://hl7.org/fhir/genomicstudy-methodtypeEnzyme-Linked Immunosorbent Assays (ELISA)
  fluorometryhttp://hl7.org/fhir/genomicstudy-methodtypeFluorometry
  fusion-genes-microarrayshttp://hl7.org/fhir/genomicstudy-methodtypeFusion genes microarrays
  g-bandinghttp://hl7.org/fhir/genomicstudy-methodtypeG-banding
  gc-mshttp://hl7.org/fhir/genomicstudy-methodtypeGas chromatography–mass spectrometry (GC-MS)
  gene-expression-profilinghttp://hl7.org/fhir/genomicstudy-methodtypeGene expression profiling
  gene-idhttp://hl7.org/fhir/genomicstudy-methodtypeGeneID
  gold-nanoparticle-probe-technologyhttp://hl7.org/fhir/genomicstudy-methodtypeGold nanoparticle probe technology
  hplchttp://hl7.org/fhir/genomicstudy-methodtypeHigh-performance liquid chromatography (HPLC)
  lc-mshttp://hl7.org/fhir/genomicstudy-methodtypeLiquid chromatography mass spectrometry (LC-MS)
  lc-ms-mshttp://hl7.org/fhir/genomicstudy-methodtypeLiquid chromatography-tandem mass spectrometry (LC-MS/MS)
  metabolite-levelshttp://hl7.org/fhir/genomicstudy-methodtypeMetabolite levels
  methylation-specific-pcrhttp://hl7.org/fhir/genomicstudy-methodtypeMethylation-specific PCR
  microarrayhttp://hl7.org/fhir/genomicstudy-methodtypeMicroarray
  mlpahttp://hl7.org/fhir/genomicstudy-methodtypeMultiplex Ligation-dependent Probe Amplification (MLPA)
  ngs-mpshttp://hl7.org/fhir/genomicstudy-methodtypeNext-Generation (NGS)/Massively parallel sequencing (MPS)
  olahttp://hl7.org/fhir/genomicstudy-methodtypeOligonucleotide Ligation Assay (OLA)
  oligonucleotide-hybridization-based-dna-sequencinghttp://hl7.org/fhir/genomicstudy-methodtypeOligonucleotide hybridization-based DNA sequencing
  otherhttp://hl7.org/fhir/genomicstudy-methodtypeOther
  pcrhttp://hl7.org/fhir/genomicstudy-methodtypePCR
  pcr-with-allele-specific-hybridizationhttp://hl7.org/fhir/genomicstudy-methodtypePCR with allele specific hybridization
  pcr-rflp-with-southern-hybridizationhttp://hl7.org/fhir/genomicstudy-methodtypePCR-RFLP with Southern hybridization
  protein-truncation-testhttp://hl7.org/fhir/genomicstudy-methodtypeProtein truncation test
  pyrosequencinghttp://hl7.org/fhir/genomicstudy-methodtypePyrosequencing
  q-bandinghttp://hl7.org/fhir/genomicstudy-methodtypeQ-banding
  qpcrhttp://hl7.org/fhir/genomicstudy-methodtypeQuantitative PCR (qPCR)
  r-bandinghttp://hl7.org/fhir/genomicstudy-methodtypeR-banding
  rflphttp://hl7.org/fhir/genomicstudy-methodtypeRFLP
  rt-lamphttp://hl7.org/fhir/genomicstudy-methodtypeRT-LAMP
  rt-pcrhttp://hl7.org/fhir/genomicstudy-methodtypeRT-PCR
  rt-pcr-with-gel-analysishttp://hl7.org/fhir/genomicstudy-methodtypeRT-PCR with gel analysis
  rt-qpcrhttp://hl7.org/fhir/genomicstudy-methodtypeRT-qPCR
  snp-detectionhttp://hl7.org/fhir/genomicstudy-methodtypeSNP Detection
  silver-staininghttp://hl7.org/fhir/genomicstudy-methodtypeSilver staining
  skyhttp://hl7.org/fhir/genomicstudy-methodtypeSpectral karyotyping (SKY)
  t-bandinghttp://hl7.org/fhir/genomicstudy-methodtypeT-banding
  ms-mshttp://hl7.org/fhir/genomicstudy-methodtypeTandem mass spectrometry (MS/MS)
  tetra-nucleotide-repeat-by-pcr-or-southern-blothttp://hl7.org/fhir/genomicstudy-methodtypeTetra-nucleotide repeat by PCR or Southern Blot
  tiling-arrayshttp://hl7.org/fhir/genomicstudy-methodtypeTiling Arrays
  trinucleotide-repeat-by-pcr-or-southern-blothttp://hl7.org/fhir/genomicstudy-methodtypeTrinucleotide repeat by PCR or Southern Blot
  uni-directional-sanger-sequencinghttp://hl7.org/fhir/genomicstudy-methodtypeUni-directional Sanger sequencing

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code