This page is part of the Healthcare Associated Infection Implementation Guide (v1.1.0: STU 2 Ballot 1) based on FHIR R3. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions 
| Defining URL: | http://hl7.org/fhir/us/hai/ValueSet/2.16.840.1.113883.13.16 |
| Version: | 1.1.0 |
| Name: | NHSNPathogenCode |
| Definition: | Codes representing a pathogen. |
| Source Resource: | XML / JSON / Turtle |
This value set is not used
NHSNPathogenCode
Codes representing a pathogen.
This value set includes codes from the following code systems:
- Include these codes as defined in
http://snomed.info/sctCode Display 115161005 Abiotrophia 113714003 Abiotrophia defectiva 113714003 Streptococcus defectivus 84858009 Acholeplasma 84858009 Sapromyces 89082003 Acholeplasma laidlawii 89082003 Asterococcus laidlawii 89082003 Mycoplasma laidlawii 89082003 Sapromyces laidlawii 86450009 Acholeplasma oculi 91620006 Achromobacter 413414001 Achromobacter denitrificans 413414001 Achromobacter xylosoxidans denitrificans 413414001 Alcaligenes xylosoxidans denitrificans 413420000 Achromobacter piechaudii 413421001 Achromobacter ruhlandii 413424009 Achromobacter xylosoxidans 413424009 Alcaligenes xylosoxidans 707330008 multidrug resistant Achromobacter xylosoxidans 423897003 Achromobacter xylosoxidans xylosoxidans 59995003 Achromobacter, group Vd biotype 1 55156008 Achromobacter, group Vd biotype 2 28207003 Acidaminococcus 63005002 Acidaminococcus fermentans 115153000 Acidovorax 113685003 Acidovorax delafieldii 113685003 Pseudomonas delafieldii 113686002 Acidovorax facilis 113686002 Pseudomonas facilis 113687006 Acidovorax temperans 7757008 Acinetobacter 446157004 multidrug resistant Acinetobacter 445721008 carbapenem resistant Acinetobacter 91288006 Acinetobacter baumannii 82550008 Acinetobacter calcoaceticus 82550008 Herellea vaginicola 82550008 Acinetobacter anitratus 82550008 Acinetobacter calcoaceticus anitratus 82550008 Bacterium anitratum 113376007 Acinetobacter calcoaceticus-baumannii complex 113377003 Acinetobacter genospecies 3 77045006 Acinetobacter haemolyticus 77045006 Acinetobacter hemolyticus 252000 Acinetobacter johnsonii 13879009 Acinetobacter junii 83088009 Acinetobacter lwoffi 83088009 Acinetobacter calcoaceticus lwoffi 83088009 Acinetobacter lwoffii 83088009 Acinetobacter calcoaceticus lwoffii 83088009 Mima polymorpha 113381003 Acinetobacter radioresistens 113381003 Acinetobacter radioresistans 423732001 Acinetobacter schindleri 424791004 Acinetobacter ursingii 85851009 Actinobacillus 27165004 Actinobacillus equuli 43638004 Actinobacillus hominis 78043002 Actinobacillus lignieresii 112272003 Actinobacillus suis 1839009 Actinobacillus ureae 1839009 Pasteurella ureae 114043007 Actinobaculum 416353004 Actinobaculum massiliense 416353004 Actinobaculum massiliae 114044001 Actinobaculum schaalii 427148009 Actinobaculum urinale 41571004 Actinomadura 113402007 Actinomadura latina 90285002 Actinomadura madurae 90285002 Nocardia madurae 65202006 Actinomadura pelletieri 40560008 Actinomyces 59806008 Actinomyces bovis 427237005 Actinomyces cardiffensis 426330001 Actinomyces dentalis 113414004 Actinomyces europaeus 419012004 Actinomyces funkei 113415003 Actinomyces georgiae 113415003 Actinomyces DO8 113416002 Actinomyces gerencseriae 113416002 Actinomyces israelii serotype II 113416002 Actinomyces gerenseriae 113417006 Actinomyces graevenitzii 427269001 Actinomyces hongkongensis 46369004 Actinomyces israelii 46369004 Actinomycosis israelii 3174002 Actinomyces meyeri 3174002 Actinobacterium meyeri 8940004 Actinomyces naeslundii 425520001 Actinomyces nasicola 8.7780299100008704E+17 Actinomyces neuii 12069003 Actinomyces odontolyticus 425488009 Actinomyces oricola 447175005 Actinomyces oris 427691003 Actinomyces radicidentis 113421004 Actinomyces radingae 113422006 Actinomyces turicensis 409827009 Actinomyces urogenitalis 33529006 Actinomyces viscosus 9008009 Aerococcus 409818008 Aerococcus christensenii 131205009 Aerococcus sanguicola 427222006 Aerococcus sanguinicola 243230001 Aerococcus urinae 430979003 Aerococcus urinaeequi 430979003 Pediococcus urinaeequi 409819000 Aerococcus urinaehominis 78803006 Aerococcus viridans 88529008 Aeromonas 115027006 Aeromonas bestiarum 115036005 Aeromonas caviae 115036005 Aeromonas punctata 115036005 Aeromonas hydrophila anaerogenes 429561000124107 Aeromonas caviae complex 115028001 Aeromonas encheleia 115030004 Aeromonas eucrenophilia 115030004 Aeromonas eucrenophila 85823000 Aeromonas hydrophila 85823000 Pseudomonas hydrophila 429581000124102 Aeromonas hydrophila complex 115034008 Aeromonas jandei 115034008 Aeromonas jandaei 65192005 Aeromonas media 425862003 Aeromonas molluscorum 115035009 Aeromonas popoffii 30334005 Aeromonas salmonicida 64537004 Aeromonas salmonicida achromogenes 51768004 Aeromonas salmonicida masoucida 416266002 Aeromonas salmonicida pectinolytica 62520007 Aeromonas salmonicida salmonicida 243315007 Aeromonas salmonicida smithia 115039003 Aeromonas schubertii 426333004 Aeromonas simiae 43731003 Aeromonas sobria 243316008 Aeromonas trota 243316008 Aeromonas enteropelogenes 243316008 Aeromonas tructi 9281006 Aeromonas veronii 243317004 Aeromonas veronii sobria 243318009 Aeromonas veronii veronii 114234007 Afipia 114236009 Afipia clevelandensis 114237000 Afipia felis 441718002 Aggregatibacter 442680008 Aggregatibacter actinomycetemcomitans 442680008 Actinobacillus actinomycetemcomitans 442680008 Haemophilus actinomycetemcomitans 442683005 Aggregatibacter aphrophilus 442683005 Haemophilus aphrophilus 442651004 Aggregatibacter segnis 442651004 Haemophilus segnis 33436009 Agrobacterium 427200004 Agromyces 68571003 Alcaligenes 25223004 Alcaligenes faecalis 25223004 Alcaligenes odorans 25223004 Pseudomonas odorans 58251005 Alcaligenes piechaudii 53735001 Alcaligenes xylosoxidans xylosoxidans 416056000 Alishewanella 417165004 Alishewanella fetalis 427315001 Alistipes 426435007 Alistipes putredinis 426435007 Bacteroides putredinis 396453006 Alloiococcus 396454000 Alloiococcus otitis 429601004 Alloscardovia 429317001 Alloscardovia omnicolens 55181006 Alysiella 444924000 Alysiella crassa 444924000 Simonsiella crassa 115149002 Amycolatopsis 427705005 Amycolatopsis orientalis 427705005 Nocardia orientalis 55757006 Anaerobiospirillum 46934005 Anaerobiospirillum succinoproducens 46934005 Anaerobiospirillum succiniciproducens 426729008 Anaerobiospirillum thomasii 413518000 Anaerococcus 413519008 Anaerococcus hydrogenalis 413519008 Peptostreptococcus hydrogenalis 413520002 Anaerococcus lactolyticus 413520002 Peptostreptococcus lactolyticus 413521003 Anaerococcus octavius 413521003 Peptostreptococcus octavius 413522005 Anaerococcus prevotii 413522005 Peptostreptococcus prevotii 427220003 Anaerococcus tetradius 413524006 Anaerococcus tretradius 413524006 Peptostreptococcus tetradius 413525007 Anaerococcus vaginalis 413525007 Peptostreptococcus vaginalis 54522000 Anaerorhabdus 24716009 Anaerorhabdus furcosus 24716009 Bacteroides furcosus 3351007 Anaplasma 114125006 Aneurinibacillus 114126007 Aneurinibacillus aneurinilyticus 114126007 Bacillus aneurinolyticus 51714009 Arcanobacterium 44723000 Arcanobacterium haemolyticum 44723000 Corynebacterium hemolyticum 428939003 Arcanobacterium pluranimalium 114206000 Arcobacter 114207009 Arcobacter butzleri 114207009 Campylobacter butzleri 408629003 Arcobacter nitrofigilis 408629003 Campylobacter nitrofigilis 56214009 Arthrobacter 113432004 Arthrobacter agilis 127496003 Arthrobacter albus 428949000 Arthrobacter arilaitensis 113433009 Arthrobacter astrocyaneus 113434003 Arthrobacter aurescens 428950000 Arthrobacter bergerei 428038008 Arthrobacter chlorophenolicus 44955005 Arthrobacter citreus 417608004 Arthrobacter creatinolyticus 113435002 Arthrobacter crystallopoietes 113436001 Arthrobacter cumminsii 429762004 Arthrobacter flavus 428332000 Arthrobacter gandavensis 429237000 Arthrobacter gangotriensis 3840003 Arthrobacter globiformis 113437005 Arthrobacter histidinolovorans 48276002 Arthrobacter ilicis 429238005 Arthrobacter kerguelensis 427847001 Arthrobacter koreensis 127497007 Arthrobacter luteolus 428270003 Arthrobacter methylotrophus 113438000 Arthrobacter mysorens 428337006 Arthrobacter nasiphocae 113439008 Arthrobacter nicotianae 113440005 Arthrobacter nicotinovorans 429001000 Arthrobacter nitroguajacolicus 446485009 Arthrobacter oryzae 113441009 Arthrobacter oxydans 113442002 Arthrobacter pascens 113443007 Arthrobacter polychromogenes 62636004 Arthrobacter protophormiae 428338001 Arthrobacter psychrolactophilus 428048005 Arthrobacter psychrophenolicus 113444001 Arthrobacter ramosus 428277000 Arthrobacter rhombi 429003002 Arthrobacter roseus 428049002 Arthrobacter russicus 704978005 Arthrobacter scleromae 429111005 Arthrobacter sulfonivorans 33287009 Arthrobacter sulfureus 112273008 Arthrobacter uratoxydans 113446004 Arthrobacter ureafaciens 113447008 Arthrobacter viscosus 113448003 Arthrobacter woluwensis 115136007 Atopobium 428580003 Atopobium fossor 428580003 Eubacterium fossor 113630002 Atopobium minutum 113630002 Lactobacillus minutus 113631003 Atopobium parvulum 113631003 Peptostreptococcus parvulus 113631003 Streptococcus parvulus 113632005 Atopobium rimae 113632005 Lactobacillus rimae 417246003 Atopobium vaginae 708491006 Aureimonas 421099007 Averyella 429076006 Avibacterium gallinarum 429076006 Pasteurella gallinarum 413607005 Azospirillum 413609008 Azospirillum brasilense 44762009 Bacillus 413352001 Bacillus, not B. anthracis 428272006 Bacillus aeolius 446486005 Bacillus aerius 429112003 Bacillus agaradhaerens 90547001 Bacillus alcalophilus 428278005 Bacillus algicola 82289003 Bacillus amyloliquefaciens 21927003 Bacillus anthracis 423188000 Bacillus aquimaris 429004008 Bacillus arseniciselenatis 429115001 Bacillus asahii 113450006 Bacillus atrophaeus 72997009 Bacillus azotoformans 33457001 Bacillus badius 429638004 Bacillus barbaricus 429246006 Bacillus bataviensis 39232002 Bacillus benzoevorans 427831003 Bacillus boroniphilus 447039005 Bacillus butanolivorans 113451005 Bacillus carboniphilus 84408007 Bacillus cereus 413618005 Bacillus cereus group 113452003 Bacillus chittonlyticus 71812004 Bacillus circulans 413619002 Bacillus circulans group 113453008 Bacillus clarkii 113454002 Bacillus clausii 81346002 Bacillus coagulans 113455001 Bacillus cohnii 445081000 Bacillus decisifrondis 429116000 Bacillus decolorationis 113456000 Bacillus dipsosauri 428129008 Bacillus drentensis 113457009 Bacillus ehimensis 429137008 Bacillus endophyticus 429348009 Bacillus farraginis 35784003 Bacillus fastidiosus 13430008 Bacillus firmus 113458004 Bacillus flexus 417062004 Bacillus fordii 427859002 Bacillus fortis 429118004 Bacillus fumarioli 428387004 Bacillus funiculus 427864003 Bacillus galactosidilyticus 429034003 Bacillus gelatini 113460002 Bacillus gibsonii 445082007 Bacillus ginsengi 29100001 Bacillus gornadae 113462005 Bacillus halmapalus 113464006 Bacillus halodenitrificans 113465007 Bacillus halodurans 113467004 Bacillus horikoshii 429138003 Bacillus horti 429139006 Bacillus humi 429035002 Bacillus hwajinpoensis 447040007 Bacillus idriensis 429145003 Bacillus indicus 432698009 Bacillus infantis 113468009 Bacillus infernus 54382003 Bacillus insolitus 429127003 Bacillus jeotgali 113469001 Bacillus kaustophilus 447041006 Bacillus korlensis 429126007 Bacillus krulwichiae 3020006 Bacillus lentus 74867004 Bacillus licheniformis 429675009 Bacillus luciferensis 413620008 Bacillus macroides 429206000 Bacillus macyae 87850009 Bacillus marinus 87850009 Bacillus globisporus marinus 424425003 Bacillus marisflavi 445083002 Bacillus massiliensis 79109002 Bacillus megaterium 113471001 Bacillus methanolicus 113472008 Bacillus mojavensis 429210002 Bacillus mucilaginosus 428576008 Bacillus muralis 33900003 Bacillus mycoides 113473003 Bacillus naganoensis 428577004 Bacillus nealsonii 429747001 Bacillus niacini 429212005 Bacillus novalis 428958007 Bacillus odysseyi 429468004 Bacillus okuhidensis 113487003 Bacillus oleronius 84897001 Bacillus pallidus 43131009 Bacillus pasteurii 428962001 Bacillus patagoniensis 442283002 Bacillus pocheonensis 113474009 Bacillus pseudalcaliphilus 113475005 Bacillus pseudofirmus 429077002 Bacillus pseudomycoides 429078007 Bacillus psychrodurans 1810009 Bacillus psychrophilus 113476006 Bacillus psychrosaccharolyticus 112274002 Bacillus pulvifaciens 16580009 Bacillus pumilus 113478007 Bacillus salexigens 428588005 Bacillus saliphilus 428966003 Bacillus selenitireducens 429221006 Bacillus shackletonii 113479004 Bacillus simplex 428972003 Bacillus siralis 84789000 Bacillus smithii 428973008 Bacillus soli 429472000 Bacillus sonorensis 70313006 Bacillus sphaericus 113480001 Bacillus sporothermodurans 25484005 Bacillus stearothermophilus 429486001 Bacillus subterraneus 83512007 Bacillus subtilis 413621007 Bacillus subtilis group 427760003 Bacillus subtilis spizizenii 447068006 Bacillus subtilis inaquosorum 427764007 Bacillus subtilis subtilis 447069003 Bacillus tequilensis 429760007 Bacillus thermantarcticus 113481002 Bacillus thermoamylovorans 113482009 Bacillus thermocatenulatus 113483004 Bacillus thermocloacae 36302007 Bacillus thermoglucosidasius 64840009 Bacillus thuringiensis 34498004 Bacillus tusciae 113484005 Bacillus vallismortis 113485006 Bacillus vedderi 429488000 Bacillus velezensis 429229008 Bacillus vietnamensis 429230003 Bacillus vireti 413622000 Bacillus weihenstephanensis 57522007 Bacteroides 14342006 Bacteroides caccae 14342006 Bacteroides fragilis group 3452A 86193002 Bacteroides coagulans 90072006 Bacteroides eggerthii 55247009 Bacteroides fragilis 55247009 Bacteroides fragilis fragilis 417375007 Bacteroides fragilis group 708567004 Bacteroides massiliensis 10091000087105 Bacteroides nordii 86936008 Bacteroides ovatus 86936008 Bacteroides fragilis ovatus 50504006 Bacteroides pyogenes 163009 Bacteroides stercoris 163009 Bacteroides fragilis a 85541000 Bacteroides tectum 431145009 Bacteroides tectus 34236001 Bacteroides thetaiotaomicron 34236001 Bacteroides fragilis thetaiotamicron 59604009 Bacteroides uniformis 52798008 Bacteroides vulgatus 52798008 Bacteroides fragilis vulgatus 425729002 Bacteroides zoogleoformans 425729002 Prevotella zoogleoformans 416418007 Balneatrix 416691007 Balneatrix alpica 62496009 Bartonella 62496009 Rochalimaea 62496009 Grahamella 62496009 Rochalimea 243352007 Bartonella bacilliformis 114223009 Bartonella clarridgeiae 103513003 Bartonella elizabethae 103513003 Rochalimaea elizabethae 103510000 Bartonella henselae 103510000 Rochalimaea henselae 103511001 Bartonella quintana 103511001 Rochalimaea quintana 103511001 Rickettsia quintana 103512008 Bartonella vinsonii 103512008 Rochalimaea vinsonii 417657001 Bartonella vinsonii arupensis 114228000 Bartonella vinsonii berkhoffii 115659000 Bergeyella 113718000 Bergeyella zoohelcum 113718000 Weeksella zoohelcum 5912005 Bifidobacterium 34446001 Bifidobacterium adolescentis 33811005 Bifidobacterium angulatum 27108000 Bifidobacterium bifidum 35011006 Bifidobacterium breve 11539003 Bifidobacterium catenulatum 36623007 Bifidobacterium dentium 36623007 Bifidobacterium appendicitis 36623007 Bifidobacterium ericksonii 51095003 Bifidobacterium gallicum 35848003 Bifidobacterium infantis 19464000 Bifidobacterium longum 19464000 Bifidobacterium suis 19333001 Bifidobacterium pseudocatenulatum 385502004 Bifidobacterium scardovii 114242008 Bilophila 114243003 Bilophila wadsworthia 448390002 Blautia 449531007 Blautia coccoides 449574005 Blautia hansenii 449574005 Streptococcus hansenii 449574005 Ruminococcus hansenii 698205008 Blautia producta 698205008 Ruminococcus productus 698205008 Peptostreptococcus productus 698205008 Streptococcus productus 46466005 Bordetella 43354005 Bordetella avium 10620008 Bordetella bronchiseptica 10620008 Alcaligenes bronchisepticus 10620008 CDC group EF26 10620008 CDC group IVa 113495004 Bordetella hinzii 116035000 Bordetella holmesii 116035000 CDC Nonoxidizer group 2 26183002 Bordetella parapertussis 5247005 Bordetella pertussis 5247005 Hemophilus pertussis 416665006 Bordetella petrii 113496003 Bordetella trematum 112277009 Borrelia 416551001 Borrelia afzelii 58382007 Borrelia anserina 76327009 Borrelia burgdorferi 12544007 Borrelia caucasica 43459001 Borrelia coriaceae 35660000 Borrelia crocidurae 39709002 Borrelia duttonii 39709002 Borrelia duttoni 113497007 Borrelia garinii 62748005 Borrelia hermsii 11787006 Borrelia hispanica 113498002 Borrelia japonica 113499005 Borrelia lusitaniae 3293005 Borrelia mazzottii 113500001 Borrelia miyamotoi 41704008 Borrelia parkeri 34726005 Borrelia recurrentis 34726005 Borrelia obermyeri 34726005 Borrelia novyi 113501002 Borrelia tanukii 89068003 Borrelia theileri 24986006 Borrelia turicatae 113503004 Borrelia valaisiana 30765003 Borrelia venezuelensis 11572003 Brachyspira 48621001 Brachyspira aalborgi 113517008 Brachyspira pilosicoli 113517008 Serpulina pilosicoli 114114002 Brevibacillus 114115001 Brevibacillus agri 114115001 Bacillus agri 114115001 Bacillus galactophilus 114117009 Brevibacillus brevis 114117009 Bacillus brevis 114118004 Brevibacillus centrosporus 114118004 Bacillus centrosporus 114121002 Brevibacillus laterosporus 114121002 Bacillus laterosporus 114122009 Brevibacillus parabrevis 114122009 Bacillus parabrevis 3603008 Brevibacterium 6405003 Brevibacterium casei 57301000 Brevibacterium epidermidis 112278004 Brevibacterium linens 409826000 Brevibacterium luteolum 409826000 Brevibacterium lutzens 431099002 Brevibacterium mcbrellneri 431681006 Brevibacterium sanguinis 115154006 Brevundimonas 113689009 Brevundimonas diminuta 113689009 Pseudomonas diminuta 113690000 Brevundimonas vesicularis 113690000 Pseudomonas vesicularis 26250004 Brucella 24224000 Brucella abortus 24224000 Brucella melitensis biovar abortus 24224000 Bacillus abortus 38025008 Brucella canis 38025008 Brucella melitensis biovar canis 72829003 Brucella melitensis 72829003 Micrococcus melitensis 28461002 Brucella neotomae 28461002 Brucella melitensis biovar neotomae 35049005 Brucella ovis 35049005 Brucella melitensis biovar ovis 48317004 Brucella suis 48317004 Brucella melitensis biovar suis 55851000 Budvicia 75464008 Budvicia aquatica 413724008 Bulleidia 413725009 Bulleidia extructa 414324002 Burkholderia 416467009 Burkholderia ambifaria 417565005 Burkholderia anthina 445778000 Burkholderia arboris 416941006 Burkholderia cenocepacia 113669008 Burkholderia cepacia 113669008 Pseudomonas cepacia 113669008 Pseudomonas multivorans 131281002 Burkholderia cepacia complex 698061006 Burkholderia contaminans 700394003 Burkholderia diffusa 431173006 Burkholderia dolosa 113671008 Burkholderia gladioli 113671008 Pseudomonas alliicola 113671008 Pseudomonas antimicrobica 113671008 Pseudomonas cocovenenans 113671008 Pseudomonas gladioli 113671008 Burkholderia cocovenenans 442143003 Burkholderia lata 700393009 Burkholderia latens 113674000 Burkholderia mallei 113674000 Pseudomonas mallei 700392004 Burkholderia metallica 113675004 Burkholderia multivorans 116399000 Burkholderia pseudomallei 116399000 Actinobacillus pseudomallei 116399000 Flavobacterium pseudomallei 116399000 Malleomyces pseudomallei (OT) 116399000 Pseudomonas pseudomallei 116399000 Human Glanders bacillus 116399000 Whitmore's bacillus 113677007 Burkholderia pyrrocinia 113677007 Pseudomonas pyrrocinia 416616001 Burkholderia stabilis 113678002 Burkholderia thailandensis 431686001 Burkholderia ubonensis 113680008 Burkholderia vietnamiensis 3451006 Buttiauxella 10969007 Buttiauxella agrestis 416844002 Buttiauxella brennerae 417520001 Buttiauxella ferragutiae 416852004 Buttiauxella gaviniae 417035007 Buttiauxella izardii 114261007 Buttiauxella noackiae 416444007 Buttiauxella warmboldiae 447185006 Butyricimonas 447458006 Butyricimonas virosa 20778009 Butyrivibrio 22176007 Butyrivibrio fibrisolvens 431168000 Butyrivibrio hungatei 86702009 Calymmatobacterium 35408001 Campylobacter 40614002 Campylobacter coli 40614002 CDC group EF22 9892000 Campylobacter concisus 7858008 Campylobacter cryaerophila 7858008 Arcobacter cryaerophilus 116037008 Campylobacter curvus 116037008 Wolinella curva 84210007 Campylobacter fetus 84210007 Vibrio fetus 60817000 Campylobacter fetus venerealis 64589009 Campylobacter fetus fetus 113528007 Campylobacter gracilis 113528007 Bacteroides gracilis 113522008 Campylobacter helveticus 416679003 Campylobacter hominis 9041007 Campylobacter hyointestinalis 432460004 Campylobacter insulaenigrae 66543000 Campylobacter jejuni 66543000 Campylobacter fetus jejuni 113523003 Campylobacter jejuni doylei 113524009 Campylobacter jejuni jejuni 432537009 Campylobacter lanienae 116386003 Campylobacter lari 116386003 Campylobacter laridis 87402003 Campylobacter mucosalis 87402003 Campylobacter sputorum mucosalis 113525005 Campylobacter rectus 113525005 Wolinella recta 113526006 Campylobacter showae 91524009 Campylobacter sputorum 91524009 Vibrio sputorum 19552006 Campylobacter sputorum bubulus 58928003 Campylobacter sputorum sputorum 103427005 Campylobacter upsaliensis 450602004 Campylobacter ureolyticus 450602004 Bacteroides ureolyticus 22294008 Capnocytophaga 113529004 Capnocytophaga canimorsus 113529004 CDC group DF-2 113530009 Capnocytophaga cynodegmi 113530009 CDC group DF-2-like 66463009 Capnocytophaga gingivalis 113531008 Capnocytophaga granulosa 113532001 Capnocytophaga hemolytica 4256006 Capnocytophaga ochracea 4256006 Bacteroides ochraceus 4256006 CDC group DF-1 89892005 Capnocytophaga sputigena 22292007 Cardiobacterium 7333005 Cardiobacterium hominis 428148007 Cardiobacterium valvarum 417391005 Catenibacterium 416305003 Catenibacterium mitsuokai 363774008 Catonella 363775009 Catonella morbi 413793007 CDC Enteric Group 58 116403009 EF-4 116405002 CDC group EF-4b 127534000 CDC group IVc-2 413797008 CDC Group Vb-3 413797008 Pseudomonas stutzeri-like 413797008 Arginine positive Pseudomonas stutzeri-like 69937007 Cedecea 30854004 Cedecea davisae 30854004 CDC Enteric group 15 2345009 Cedecea lapagei 83767006 Cedecea neteri 83767006 Cedecea species 4 243292007 Cedecea species 3 243293002 Cedecea species 5 114188006 Cellulomonas 114196001 Cellulomonas hominis 431580002 Cellulomonas humilata 409860007 Cellulosimicrobium 409862004 Cellulosimicrobium cellulans 409862004 Cellulomonas cellulans 90699007 Centipeda 72002007 Centipeda periodontii 16241000 Chlamydia 63938009 Chlamydia trachomatis 63938009 Lymphogranuloma venereum virus 372926008 Chlamydophila 413820006 Chlamydophila abortus 103514009 Chlamydophila pneumoniae 103514009 Chlamydia pneumoniae 103514009 Chlamydia TWAR 14590003 Chlamydophila psittaci 14590003 Chlamydia psittaci 14590003 Chlamydozoon psittaci 14590003 Ehrlichia psittaci 14590003 Rickettsia psittaci 14590003 Rickettsiaformis psittacosis 20064000 Chromobacterium 11042002 Chromobacterium violaceum 11042002 Bacillus violaceus 11042002 Chromobacterium janthinum 115125000 Chryseobacterium 113548000 Chryseobacterium gleum 113548000 Flavobacterium gleum 113549008 Chryseobacterium indologenes 113549008 Flavobacterium indologenes 113549008 Flavobacterium aureum 5274006 Chryseomonas 33919008 Chryseomonas luteola 33919008 Pseudomonas luteola 33919008 Chryseomonas polytricha 33919008 CDC group Ve-1 75972000 Citrobacter 55744003 Citrobacter amalonaticus 55744003 Levinea amalonatica 114262000 Citrobacter braakii 114263005 Citrobacter farmeri 114263005 Citrobacter amalonaticus, biogroup 1 6265002 Citrobacter freundii 6265002 Escherichia freundii 6265002 Colobactrum freundii 721909006 Extended spectrum beta-lactamase producing Citrobacter freundii 416990006 Citrobacter gillenii 114264004 Citrobacter koseri 114264004 Citrobacter diversus 114264004 Levinea malonitica 417581000 Citrobacter murliniae 114444007 Citrobacter rodentium 114265003 Citrobacter sedlakii 114442006 Citrobacter werkmanii 114443001 Citrobacter youngae 8191000 Clostridium 413881007 Clostridium, not C. perfringens 113565009 Clostridium argentiense 113565009 Clostridium botulinum group G 113565009 Clostridium argentinense 31169007 Clostridium baratii 31169007 Clostridium paraperfringens 31169007 Clostridium perenne 31169007 Clostridium barati 432470002 Clostridium bartlettii 8208007 Clostridium bifermentans 413879005 Clostridium bolteae 13080008 Clostridium botulinum 18065004 Clostridium botulinum, type A 8386006 Clostridium botulinum, type E 32829006 Clostridium botulinum, type F 19084008 Clostridium butyricum 19084008 Clostridium pseudotetanicum 16616000 Clostridium cadaveris 7889007 Clostridium carnis 113566005 Clostridium celerecrescens 53220001 Clostridium clostridioforme 53220001 Bacteroides clostridiiformis 76955000 Clostridium cochlearium 76955000 Clostridium lentoputrescens 24656001 Clostridium cocleatum 5933001 Clostridium difficile 5933001 Clostridium difficilis 57230009 Clostridium disporicum 14264000 Clostridium fallax 14264000 Clostridium pseudofallax 10467001 Clostridium ghonii 10467001 Clostridium ghoni 112279007 Clostridium glycolicum 45724004 Clostridium haemolyticum 45724004 Clostridium hemolyticum 45724004 Clostridium novyi type D 19185007 Clostridium hastiforme 416526002 Clostridium hathewayi 87443003 Clostridium histolyticum 50884003 Clostridium indolis 19415008 Clostridium innocuum 113580003 Clostridium intestinale 113580003 Clostridium intestinalis 40423006 Clostridium irregulare 40423006 Clostridium irregularis 37059005 Clostridium leptum 48305001 Clostridium limosum 48305001 CDC group P-1 12948002 Clostridium malenominatum 45891006 Clostridium novyi 45891006 Clostridium edematiens (OT) 45891006 Clostridium oedematiens 53591005 Clostridium novyi, type A 53591005 Clostridium edematiens, type A 74494007 Clostridium novyi, type B 74494007 Clostridium edematiens, type B 29280008 Clostridium oroticum 29280008 Zymobacterium oroticum 41966004 Clostridium paraputrificum 8331005 Clostridium perfringens 8331005 Welchia perfringens 8331005 Clostridium welchii 8331005 Gas bacillus 22321006 Clostridium putrefaciens 42706008 Clostridium ramosum 42706008 Actinomyces ramosus 42706008 Eubacterium ramosum 42706008 Eubacterium filamentosum 42706008 Ramibacterium ramosum 42706008 Bacteroides trichoides 84958008 Clostridium sardiniense 84958008 Clostridium absonum 84958008 Clostridium sardiniensis 33101000 Clostridium septicum 89313005 Clostridium sordellii 65891000 Clostridium sphenoides 42936009 Clostridium spiroforme 41468005 Clostridium sporogenes 89918009 Clostridium sporosphaeroides 58838009 Clostridium subterminale 48321006 Clostridium symbiosum 48321006 Fusobacterium biacutus 48321006 Fusobacterium symbiosum 48321006 Bacteroides symbiosus 81909005 Clostridium tertium 30917009 Clostridium tetani 417046005 Collinsella 417399007 Collinsella aerofaciens 417399007 Eubacterium aerofaciens 432267004 Collinsella intestinalis 432759008 Collinsella stercoris 413887006 Comamonas 413888001 Comamonas aquatica 413892008 Comamonas kerstersii 81829007 Comamonas terrigena 81829007 CDC EF-19 43721005 Comamonas testosteroni 43721005 Pseudomonas testosteroni 416549000 Coprococcus 416184008 Coprococcus eutactus 77086004 Corynebacterium 243254006 Corynebacterium accolens 243254006 CDC Corynebacterium group G-1 113608003 Corynebacterium afermentans 113608003 CDC Corynebacterium group ANF 113609006 Corynebacterium afermentans afermentans 113610001 Corynebacterium afermentans lipophilum 113607008 Corynebacterium ammoniagenes 113607008 Brevibacterium ammoniagenes 113611002 Corynebacterium amycolatum 423659000 Corynebacterium appendicis 65736001 Corynebacterium aquaticum 424012003 Corynebacterium aquilae 417499006 Corynebacterium argentoratense 424209005 Corynebacterium atypicum 385503009 Corynebacterium aurimucosum 385503009 Corynebacterium nigricans 413925000 Corynebacterium auris 424389005 Corynebacterium auriscanis 432270000 Corynebacterium beticola 44885001 Corynebacterium bovis 88866008 Corynebacterium callunae 424560007 Corynebacterium camporealensis 424721008 Corynebacterium capitovis 424906005 Corynebacterium casei 422791000 Corynebacterium caspium 424459004 Corynebacterium ciconiae 417134008 Corynebacterium confusum 116461008 Corynebacterium coyleae 50169005 Corynebacterium cystitidis 50169005 Corynebacterium renale type III 5851001 Corynebacterium diphtheriae 5851001 Diphtheria bacillus 5851001 Klebs-Loeffler bacillus 413926004 Corynebacterium durum 423379003 Corynebacterium efficiens 116389005 Corynebacterium falsenii 423568009 Corynebacterium felinum 47802009 Corynebacterium flavescens 416914001 Corynebacterium freneyi 243260006 Corynebacterium genitalium 432808003 Corynebacterium glaucum 413927008 Corynebacterium glucuronolyticum 413927008 Corynebacterium seminale 89651003 Corynebacterium glutamicum 89651003 Corynebacterium lilium 89651003 Micrococcus glutamicus 243280007 CDC Corynebacterium group G-2 424529007 Corynebacterium halotolerans 54276004 Corynebacterium hoagii 413928003 Corynebacterium imitans 63410006 Corynebacterium jeikeium 63410006 CDC Corynebacterium group JK 363777001 Corynebacterium kroppenstedtii 88575000 Corynebacterium kutscheri 88575000 Corynebacterium murium 416863001 Corynebacterium lipophiloflavum 363772007 Corynebacterium macginleyi 243261005 Corynebacterium manihot 446285007 Corynebacterium massiliense 424709009 Corynebacterium mastitidis 89922004 Corynebacterium matruchotii 89922004 Bacterionema matruchotii 243262003 Corynebacterium mediolanum 83594007 Corynebacterium minutissimum 413929006 Corynebacterium mucifaciens 302583000 Corynebacterium murisepticum 58879005 Corynebacterium mycetoides 243263008 Corynebacterium nephridii 116462001 Corynebacterium phocae 81368007 Corynebacterium pilosum 81368007 Corynebacterium renale type II 113612009 Corynebacterium propinquum 12050008 Corynebacterium pseudodiphtheriticum 12050008 Corynebacterium hofmannii 243264002 Corynebacterium pseudogenitalium 55084001 Corynebacterium pseudotuberculosis 55084001 Corynebacterium ovis 416570006 Corynebacterium pseudotuberculostearicum 450383002 Corynebacterium pyruviciproducens 62000003 Corynebacterium renale 62000003 Corynebacterium renale type 1 442804004 Corynebacterium resistens 131241009 Corynebacterium riegelii 243265001 Corynebacterium rubrum 416655000 Corynebacterium simulans 422898002 Corynebacterium singulare 422705004 Corynebacterium sphenisci 432362008 Corynebacterium spheniscorum 413931002 Corynebacterium, not C. diphtheriae 413930001 Corynebacterium, not C. jeikeium 63815007 Corynebacterium striatum 63815007 Corynebacterium flavidum 423784007 Corynebacterium suicordis 425307003 Corynebacterium sundsvallense 72243003 Corynebacterium tenuis 422496009 Corynebacterium terpenotabidum 424212008 Corynebacterium testudinoris 416311000 Corynebacterium thomssenii 416356007 Corynebacterium tuberculostearicum 450409000 Corynebacterium tuscaniense 450409000 Corynebacterium tuscaniae 103428000 Corynebacterium ulcerans 113613004 Corynebacterium urealyticum 113613004 CDC Corynebacterium group D-2 429443001 Corynebacterium ureicelerivorans 11575001 Corynebacterium variabile 11575001 Corynebacterium mooreparkense 11575001 Arthrobacter variabilis 11575001 Corynebacterium variabilis 243266000 Corynebacterium viscosum 116390001 Corynebacterium vitaeruminis 116390001 Brevibacterium vitarumen 116390001 Corynebacterium vitarumen 116390001 Corynebacterium vitaruminis 27101006 Corynebacterium xerosis 243267009 Corynebacterium group, CDC 243268004 Corynebacterium group A-3, CDC 243269007 Corynebacterium group A-4, CDC 243270008 Corynebacterium group A-5, CDC 243271007 Corynebacterium group B-1, CDC 243272000 Corynebacterium group B-3, CDC 243274004 Corynebacterium group C, CDC 243274004 Propionibacterium granulosus 243275003 Corynebacterium group D-1, CDC 243276002 Corynebacterium group E, CDC 243277006 Corynebacterium group F-1, CDC 243278001 Corynebacterium group F-2, CDC 243281006 Corynebacterium group I-1, CDC 243282004 Corynebacterium group I-2, CDC 12220009 Coxiella 22533000 Coxiella burnetii 444664004 Cronobacter 445559002 Cronobacter dublinensis 445560007 Cronobacter malonaticus 445561006 Cronobacter muytjensii 445562004 Cronobacter sakazakii 445639005 Cronobacter turicensis 416082009 Cryptobacterium 417538003 Cryptobacterium curtum 416121002 Cupriavidus 425009006 Cupriavidus basilensis 416329005 Cupriavidus gilardii 416329005 Ralstonia gilardii 416329005 Wautersia gilardii 423135006 Cupriavidus metallidurans 432717007 Cupriavidus necator 429465001 Cupriavidus pauculus 429465001 Wautersia paucula 416495009 Cupriavidus respiraculi 416495009 Ralstonia respiraculi 416495009 Wautersia respiaculi 416493002 Delftia 20432002 Delftia acidovorans 20432002 Comamonas acidovorans 20432002 Pseudomonas acidovorans 413976002 Dermabacter 413977006 Dermabacter hominis 413977006 CDC coryneform group 3 413977006 CDC coryneform group 5 115142006 Dermacoccus 113776005 Dermacoccus nishinomiyaensis 79048004 Dermatophilus 58141003 Dermatophilus congolensis 58141003 Dermatophilus pedis 37456006 Desulfomonas 43560009 Desulfomonas pigra 243393004 Desulfovibrio 243394005 Desulfovibrio desulfuricans 431119000 Desulfovibrio piger 431923009 Desulfovibrio vulgaris 114169004 Dialister 446809007 Dialister micraerophilus 114170003 Dialister pneumosintes 114170003 Dialister pneumonsintes 114167002 Dichelobacter 114168007 Dichelobacter nodosus 114168007 Bacteroides nodosus 409831003 Dietzia 416690008 Dolosicoccus 416464002 Dolosicoccus paucivorans 363764005 Dolosigranulum 363765006 Dolosigranulum pigrum 432232004 Dorea 433913005 Dorea formicigenerans 433914004 Dorea longicatena 713873002 Dyella 409809006 Dysgonomonas 409811002 Dysgonomonas capnocytophagoides 409811002 CDC group DF-3 409812009 Dysgonomonas gadei 14566004 Edwardsiella 4280005 Edwardsiella hoshinae 68227003 Edwardsiella ictaluri 74672006 Edwardsiella tarda 74672006 Edwardsiella anguillimortifera 114447000 Edwardsiella tarda, biogroup 1 414075007 Eggerthella 414077004 Eggerthella lenta 414077004 Eubacterium lentum 414078009 Eggerthella sinesis 59836004 Eggerthia catenaformis 59836004 Lactobacillus catenaforme 59836004 Lactobacillus catenaformis 27334000 Ehrlichia 4346009 Eikenella 52591004 Eikenella corrodens 52591004 CDC group HB-1 52591004 Bacteroides corrodens 426244005 Elizabethkingia 425774009 Elizabethkingia meningoseptica 425774009 Flavobacterium meningosepticum 425774009 CDC group Iia 115126004 Empedobacter 113629007 Empedobacter brevis 113629007 Flavobacterium breve 58683007 Enterobacter 58683007 Aerobacter 62592009 Enterobacter aerogenes 62592009 Klebsiella aerogenes 62592009 Aerobacter aerogenes 62592009 Klebsiella mobilis 84221003 Enterobacter amnigenus 84221003 Lelliottia amnigena 114452005 Enterobacter amnigenus biogroup I 114453000 Enterobacter amnigenus biogroup II 33115003 Enterobacter asburiae 33115003 CDC Enteric group 17 714316001 multidrug resistant Enterobacter asburiae 114451003 Enterobacter cancerogenus 114451003 Erwinia cancerogena 14385002 Enterobacter cloacae 14385002 Aerobacter cloacae 14385002 Cloaca cloacae 714317005 multiple drug-resistant Enterobacter cloacae 714007005 carbapenem resistant Enterobacter cloacae 721910001 Extended spectrum beta-lactamase producing Enterobacter cloacae 56813009 Enterobacter cloacae dissolvens 56813009 Erwinia dissolvens 56813009 Enterobacter dissolvens 414102007 Enterobacter cloacae complex 114454006 Enterobacter hormaechei 114454006 Enterobacter hormaechi 114454006 CDC Enteric group 75 35165009 Enterobacter intermedius 35165009 Enterobacter intermedium 114456008 Enterobacter kobei 432763001 Enterobacter ludwigii 114455007 Enterobacter pyrinus 2785000 Enterococcus 2785000 Streptococcus group D, Enterococcus 113727004 Vancomycin resistant Enterococcus 425342004 Enterococcus asini 87875008 Enterococcus avium 87875008 Streptococcus avium 424191009 Enterococcus canis 30949009 Enterococcus casseliflavus 30949009 Enterococcus flavescens 30949009 Streptococcus casseliflavus 113722005 Enterococcus cecorum 113722005 Streptococcus cecorum 113724006 Enterococcus dispar 46464008 Enterococcus durans 46464008 Streptococcus durans 78065002 Enterococcus faecalis 78065002 Streptococcus faecalis 712663006 Vancomycin resistant Enterococcus faecalis 90272000 Enterococcus faecium 90272000 Streptococcus faecium 712665004 Vancomycin resistant Enterococcus faecium 53233007 Enterococcus gallinarum 53233007 Streptococcus gallinarum 416934000 Enterococcus gilvus 423614008 Enterococcus haemoperoxidus 422482003 Enterococcus hermanniensis 73852008 Enterococcus hirae 422707007 Enterococcus italicus 422707007 Enterococcus saccharominimus 10262005 Enterococcus malodoratus 10262005 Streptococcus fecalis malodoratus 424862009 Enterococcus moraviensis 38004008 Enterococcus mundtii 417099004 Enterococcus pallens 432791009 Enterococcus phoeniculicola 103436009 Enterococcus pseudoavium 103437000 Enterococcus raffinosus 431989005 Enterococcus ratti 103438005 Enterococcus saccharolyticus 103438005 Streptococcus saccharolyticus 113726008 Enterococcus sulfureus 424710004 Enterococcus villorum 38865008 Erwinia 431272005 Erwinia persicina 88266001 Erysipelothrix 431389000 Erysipelothrix inopinata 48666005 Erysipelothrix rhusiopathiae 48666005 Erysipelothrix insidiosa 12575003 Erysipelothrix tonsillarum 64735005 Escherichia 419388003 Escherichia albertii 112283007 Escherichia coli 409800005 Extended spectrum beta-lactamase producing Escherichia coli 103429008 EHEC, serotype O157:H7 103429008 Enterohemorrhagic Escherichia coli, serotype O157:H7 83285000 Enteropathogenic Escherichia coli 417207000 Escherichia coli, inactive 72461005 Escherichia fergusonii 72461005 CDC Enteric group 10 85786000 Escherichia hermannii 53013003 Escherichia vulneris 5615005 Eubacterium 113728009 Eubacterium barkeri 113728009 Clostridium barkeri 20347007 Eubacterium biforme 12734008 Eubacterium brachy 29984006 Eubacterium budayi 29984006 Eubacterium cadaveris 113730006 Eubacterium callanderi 13257008 Eubacterium combesii 59949005 Eubacterium contortum 20804002 Eubacterium cylindroides 82964000 Eubacterium dolichum 66412009 Eubacterium eligens 4696003 Eubacterium hadrum 58040000 Eubacterium hallii 113733008 Eubacterium infirmum 87632000 Eubacterium limosum 87632000 Butyribacterium rettgeri 113734002 Eubacterium minutum 46192006 Eubacterium moniliforme 22777005 Eubacterium nitrogenes 48215005 Eubacterium nodatum 8315002 Eubacterium ramulus 69189003 Eubacterium rectale 41543005 Eubacterium saburreum 41543005 Leptotrichia aerogenes 113735001 Eubacterium saphenum 70459007 Eubacterium siraeum 432171006 Eubacterium sulci 432171006 Fusobacterium sulci 29575000 Eubacterium tenue 20578007 Eubacterium ventriosum 4791002 Eubacterium yurii 3878001 Ewingella 19027003 Ewingella americana 114178005 Exiguobacterium 114179002 Exiguobacterium acetylicum 414180001 Facklamia 414181002 Facklamia hominis 417537008 Facklamia ignava 416607000 Facklamia languida 416870001 Facklamia sourekii 432914009 Facklamia tabacinasalis 432915005 Faecalibacterium 433993006 Faecalibacterium prausnitzii 433993006 Fusobacterium prausnitzii 115663007 Filifactor 431367004 Filifactor alocis 431367004 Fusobacterium alocis 114216008 Filifactor villosus 114216008 Clostridium villosum 417248002 Finegoldia 417469002 Finegoldia magna 417469002 Peptostreptococcus magnus 18986002 Flavobacterium 113749005 Flavobacterium mitzutaii 113749005 Sphingobacterium mizutae 14795006 Flavobacterium devorans 127530009 CDC group IIe 127530009 Flavobacterium group IIe 127532001 CDC group IIh 127532001 Flavobacterium group IIh 127533006 CDC group IIi 127533006 Flavobacterium species group IIi 447035004 Flavonifractor 447490001 Flavonifractor plautii 447490001 Clostridium orbiscindens 447490001 Eubacterium plautii 447490001 Fusobacterium plauti 115165001 Fluoribacter 50255000 Francisella 51526001 Francisella tularensis 51526001 Pasteurella tularensis 33562003 Fusobacterium 432342000 Fusobacterium canifelinum 432343005 Fusobacterium equinum 84644009 Fusobacterium gonidiaformans 84644009 Actinomyces gonidiaformis 112330001 Fusobacterium mortiferum 33311002 Fusobacterium naviforme 17304009 Fusobacterium necrogenes 27274008 Fusobacterium necrophorum 27274008 Sphaerophorus necrophorus 27274008 Bacteroides necrophorus 27274008 Actinomyces necrophorus 113757008 Fusobacterium necrophorum fundiliforme 113758003 Fusobacterium necrophorum necrophorum 32763000 Fusobacterium nucleatum 32763000 Sphaerophorus fusiformis 32763000 Fusiformis fusiformis 32763000 Fusobacterium planti-vincenti 32763000 Fusobacterium fusiforme 113760001 Fusobacterium nucleatum fusiforme 113761002 Fusobacterium nucleatum nucleatum 113762009 Fusobacterium nucleatum polymorphum 113762009 Fusobacterium polymorphum 69601004 Fusobacterium periodonticum 85226004 Fusobacterium russii 113764005 Fusobacterium ulcerans 1972005 Fusobacterium varium 432277002 Gallicola 433725004 Gallicola barnesae 69256005 Gardnerella 64071004 Gardnerella vaginalis 64071004 Corynebacterium vaginale 64071004 Hemophilus vaginalis 11590002 Gemella 131310006 Gemella bergeriae 37511002 Gemella haemolysans 37511002 Gemella hemolysans 113765006 Gemella morbillorum 113765006 Streptococcus morbillorum 125038007 Gemella sanguinis 432566007 Geobacillus 433616004 Geobacillus stearothermophilus 433668006 Geobacillus thermodenitrificans 433668006 Bacillus thermodenitrificans 414344008 Globicatella 414345009 Globicatella sanguinis 414347001 Globicatella sulfidifaciens 115143001 Gordonia 113646005 Gordonia bronchialis 113646005 Rhodococcus bronchialis 443659007 Gordonia otitidis 420096009 Gordonia polyisoprenivorans 113647001 Gordonia rubripertincta 113647001 Gordonia rubropertinctus 113647001 Rhodococcus rubropertinctus 113648006 Gordonia sputi 113648006 Rhodococcus obuensis 113648006 Rhodococcus chubuensis 113649003 Gordonia terrae 113649003 Rhodococcus terrae 409814005 Granulicatella 113713009 Granulicatella adiacens 113713009 Streptococcus adjacens 113713009 Abiotrophia adiacens 113713009 Abiotrophia adjacens 115944008 Granulicatella elegans 115944008 Abiotrophia elegans 115944008 Streptococcus elegans 431444000 Grimontia 433669003 Grimontia hollisae 71268004 Haemophilus 27784005 Haemophilus aegyptius 27784005 Koch-Weeks bacillus 64889004 Haemophilus ducreyi 72339004 Haemophilus haemoglobinophilus 72339004 Haemophilus canis 54950008 Haemophilus haemolyticus 44470000 Haemophilus influenzae 44470000 Pfeiffer's bacillus 103441001 Haemophilus influenzae type a 103442008 Haemophilus influenzae type b 127505006 Haemophilus influenzae, biotype I 127506007 Haemophilus influenzae, biotype II 127507003 Haemophilus influenzae, biotype III 127508008 Haemophilus influenzae, biotype IV 127509000 Haemophilus influenzae, biotype V 127510005 Haemophilus influenzae, biotype VI 127511009 Haemophilus influenzae, biotype VII 127512002 Haemophilus influenzae, biotype VIII 115407004 Haemophilus influenzae, not b 89800007 Haemophilus parahaemolyticus 51593004 Haemophilus parainfluenzae 127513007 Haemophilus parainfluenzae, biotype I 127514001 Haemophilus parainfluenzae, biotype II 127515000 Haemophilus parainfluenzae, biotype III 127516004 Haemophilus parainfluenzae, biotype IV 127517008 Haemophilus parainfluenzae, biotype V 127518003 Haemophilus parainfluenzae, biotype VI 127519006 Haemophilus parainfluenzae, biotype VII 127520000 Haemophilus parainfluenzae, biotype VIII 34902001 Haemophilus paraphrophilus 432919004 Haemophilus pittmaniae 20523001 Hafnia 76694001 Hafnia alvei 76694001 Enterobacter hafniae 116046002 Hafnia alvei biogroup I 114046004 Halomonas 417325005 Halomonas venusta 127526006 Helcococcus 127527002 Helcococcus kunzii 431369001 Helcococcus sueciensis 19454009 Helicobacter 60081005 Helicobacter acinonychis 60081005 Helicobacter acinonyx 431287000 Helicobacter aurati 113537007 Helicobacter bilis 113538002 Helicobacter bizzozeroni 416087003 Helicobacter canadensis 113539005 Helicobacter canis 113540007 Helicobacter cholecystus 29258005 Helicobacter cinaedi 29258005 Campylobacter cinaedi 68625001 Helicobacter felis 58177005 Helicobacter fennelliae 58177005 Campylobacter fennelliae 431448002 Helicobacter ganmani 113541006 Helicobacter hepaticus 431449005 Helicobacter mesocricetorum 78504006 Helicobacter muridarum 10402009 Helicobacter mustelae 10402009 Campylobacter pylori mustelae 10402009 Campylobacter mustelae 432972000 Helicobacter pametensis 113543009 Helicobacter pullorum 80774000 Helicobacter pylori 80774000 Campylobacter pylori 80774000 Helicobacter nemestrinae 80774000 Campylobacter pylori pylori 80774000 Campylobacter pyloridis 49037001 Helicobacter rappini 113544003 Helicobacter rodentium 113545002 Helicobacter salomonis 113546001 Helicobacter trogontum 432973005 Helicobacter typhlonius 14877004 Helminthosporium 116406001 Herbaspirillum 416161001 Holdemania 417221003 Holdemania filiformis 432322009 Ignavigranum 434190004 Ignavigranum ruoffiae 428734002 Inquilinus 427977006 Inquilinus limosus 409828004 Janibacter 698246003 Janibacter hoylei 115138008 Jonesia 113769000 Jonesia denitrificans 113769000 Listeria denitrificans 417655009 Kerstersia 417628000 Kerstersia gyiorum 32017003 Kingella 78676004 Kingella denitrificans 78676004 CDC group TM-1 90422000 Kingella kingae 90422000 Moraxella kingae 90422000 Moraxella kingii 129080004 Kingella oralis 129080004 Kingella orale 423288009 Kingella potus 75032006 Klebsiella 417443008 Klebsiella granulomatis 417443008 Calymmatobacterium granulomatis 40886007 Klebsiella oxytoca 713928005 Extended spectrum beta-lactamase producing Klebsiella oxytoca 56415008 Klebsiella pneumoniae 56415008 Friedlander's bacillus 714315002 multidrug resistant Klebsiella pneumoniae 446870005 carbapenem resistant Klebsiella pneumoniae 409801009 Extended spectrum beta-lactamase producing Klebsiella pneumoniae 65186004 Klebsiella pneumoniae ozaenae 65186004 Klebsiella ozaenae 18400002 Klebsiella pneumoniae pneumoniae 17688001 Klebsiella pneumoniae rhinoscleromatis 17688001 Klebsiella rhinoscleromatis 433047006 Klebsiella singaporensis 431976004 Klebsiella variicola 61161003 Kluyvera 58493008 Kluyvera ascorbata 32547006 Kluyvera cryocrescens 416156003 Kluyvera georgiana 431977008 Kluyvera intermedia 414328004 Kocuria 113772007 Kocuria kristinae 113772007 Micrococcus kristinae 113773002 Kocuria rosea 113773002 Micrococcus roseus 113773002 Kocuria erythromyxa 113774008 Kocuria varians 8031000146105 Kosakonia 416229008 Kosakonia cowanii 416229008 Enterobacter cowanii 699369007 Kroppenstedtia 699374004 Kroppenstedtia eburnea 69512006 Kurthia 243283009 Kurthia bessoni 115141004 Kytococcus 113775009 Kytococcus sedentarius 113775009 Micrococcus sedentarius 705168000 Lachnoanaerobaculum 705171008 Lachnoanaerobaculum orale 43690008 Lactobacillus 45707005 Lactobacillus acidophilus 9534006 Lactobacillus amylovorus 431689008 Lactobacillus antri 90396007 Lactobacillus brevis 49217007 Lactobacillus buchneri 1017006 Lactobacillus casei 89237007 Lactobacillus crispatus 5197002 Lactobacillus delbrueckii 65506008 Lactobacillus fermentum 65506008 Lactobacillus cellobiosus 71158000 Lactobacillus gasseri 431787001 Lactobacillus gastricus 431967006 Lactobacillus iners 65904004 Lactobacillus jensenii 113786006 Lactobacillus johnsonii 432574008 Lactobacillus kalixensis 87480009 Lactobacillus oris 113792000 Lactobacillus paracasei 14332009 Lactobacillus plantarum 14332009 Lactobacillus arizonensis 86271002 Lactobacillus reuteri 113798001 Lactobacillus rhamnosus 39861009 Lactobacillus sakei 37809002 Lactobacillus salivarius 113829005 Lactobacillus uli 432284005 Lactobacillus ultunensis 113803005 Lactobacillus vaginalis 10276006 Lactobacillus vitulinus 9879003 Lactococcus 27716002 Lactococcus garvieae 27716002 Streptococcus garviae 27716002 Enterococcus seriolicida 62079003 Lactococcus lactis 62079003 Streptococcus lactis 62079003 Bacterium lacti 43590002 Leclercia 57459006 Leclercia adecarboxylata 57459006 Escherichia adecarboxylata 7527002 Legionella 103447002 Legionella adelaidensis 18214000 Legionella anisa 432714000 Legionella beliardensis 22592008 Legionella birminghamensis 450611004 Legionella bozemanae 450611004 Fluoribacter bozemanae 103448007 Legionella brunensis 433050009 Legionella busanensis 52462004 Legionella cherrii 58923007 Legionella cincinnatiensis 432325006 Legionella drancourtii 432712001 Legionella drozanskii 113720002 Legionella dumoffii 113720002 Fluoribacter dumoffii 28109006 Legionella erythra 103449004 Legionella fairfieldensis 432453005 Legionella fallonii 17083009 Legionella feeleii 103450004 Legionella geestiana 103450004 Legionella geestiae 113721003 Legionella gormanii 113721003 Fluoribacter gormanii 58939000 Legionella hackeliae 3128001 Legionella israelensis 89709001 Legionella janestowniensis 89709001 Legionella jamestowniensis 39739007 Legionella jordanis 103452007 Legionella lansingensis 103453002 Legionella londiniensis 103453002 Legionella londoniensis 89605004 Legionella longbeachae 113806002 Legionella lytica 116379006 Legionella maceachernii 116379006 Tatlockia macaechernii 116380009 Legionella micdadei 116380009 Tatlockia micdadei 116380009 Legionella pittsburghensis 103454008 Legionella moravica 103455009 Legionella nautarum 638008 Legionella oakridgensis 38322001 Legionella parisiensis 80897008 Legionella pneumophila 113807006 Legionella quateirensis 113807006 Legionella quateriensis 103459003 Legionella quinlivanii 432713006 Legionella rowbothamii 17298000 Legionella rubrilucens 87271006 Legionella sainthelens 87271006 Legionella sainthelensi 72814000 Legionella santicrucis 103460008 Legionella shakespearei 64930007 Legionella spiritensis 14121003 Legionella steigerwaltii 433048001 Legionella taurinensis 103461007 Legionella tucsonensis 8147000 Legionella wadsworthii 113808001 Legionella waltersii 103462000 Legionella worsleiensis 103462000 Legionella worsliensis 414590004 Leifsonia 414591000 Leifsonia aquatica 414596005 Leifsonia xyli 717652001 Lelliottia 29511003 Lelliottia nimipressuralis 29511003 Erwinia nimipressuralis 29511003 Enterobacter nimipressuralis 31556000 Leminorella 74357002 Leminorella grimontii 74357002 CDC Enteric group 57 45354007 Leminorella richardii 26764003 Leptospira 116401006 Leptospira interrogans 45882007 Leptospira interrogans serogroup Autumnalis 45882007 Leptospira Autumnalis 59217001 Leptospira interrogans serogroup Ballum 59217001 Leptospira Ballum 26870001 Leptospira interrogans, serogroup Bataviae 26870001 Leptospira Bataviae 54933006 Leptospira interrogans, serogroup Canicola 54933006 Leptospira Canicola 26615002 Leptospira interrogans, serogroup Grippotyphosa 26615002 Leptospira Grippotyphosa 19251003 Leptospira interrogans, serogroup Icterohemorrhagiae 19251003 Leptospira Icterohaemorrhagiae 47840007 Leptospira interrogans, serogroup Pomona 83409006 Leptospira interrogans, serogroup Pyrogenes 52505003 Leptotrichia 85744006 Leptotrichia buccalis 431794003 Leptotrichia trevisanii 43639007 Leuconostoc 113821008 Leuconostoc citreum 113821008 Leuconostoc amelibiosum 70285009 Leuconostoc lactis 71403009 Leuconostoc mesenteroides 243235006 Leuconostoc pseudomesenteroides 23566007 Listeria 67816007 Listeria grayi 48331004 Listeria innocua 55032007 Listeria ivanovii 36094007 Listeria monocytogenes 43091008 Listeria seeligeri 80757000 Listeria welshimeri 115043004 Listonella 414633005 Macrococcus 414634004 Macrococcus bovicus 414636002 Macrococcus carouselicus 416613009 Macrococcus caseolyticus 416613009 Staphylococcus caseolyticus 414637006 Macrococcus equipercicus 128381001 Mannheimia 128385005 Mannheimia haemolytica 128385005 Pasteurella haemolytica 409856009 Massilia 409858005 Massilia timonae 44152007 Megamonas 9199006 Megamonas hypermegale 9199006 Megamonas hypermegas 9199006 Bacteroides hypermegas 48889004 Megasphaera 26044001 Megasphaera elsdenii 26044001 Peptostreptococcus elsdenii 38395008 Methylobacterium 38395008 Protomonas 103486003 Methylobacterium mesophilicum 103491002 Methylobacterium zatmanii 114199008 Microbacterium 114199008 Aureobacterium 414699006 Microbacterium arborescens 414699006 Flavobacterium arborescens 414707005 Microbacterium hydrocarbonoxydans 114203008 Microbacterium imperiale 114203008 Bacterium imperiale 114203008 Brevibacterium imperiale 114204002 Microbacterium lacticum 114063000 Microbacterium liquefaciens 114063000 Aureobacterium liquefaciens 414710003 Microbacterium maritypicum 414710003 Flavobacterium marinotypicum 414710003 Flavobacterium maritypicum 414713001 Microbacterium oxydans 414713001 Brevibacterium oxydans 414714007 Microbacterium paraoxydans 414716009 Microbacterium resistens 52864008 Micrococcus 416555005 Micrococcus antarcticus 48299003 Micrococcus luteus 48299003 Micrococcus lysodeikticus 48299003 Sarcina luteus 48299003 Micrococcus flavus 61376003 Micrococcus lylae 67084000 Micrococcus nishinomiyaensis 416958001 Micromonospora 430840008 Micromonospora chalcea 24231001 Mitsuokella 55553008 Mitsuokella multacida 55553008 Mitsuokella multiacidus 55553008 Bacteroides multiacidus 8984004 Mobiluncus 8984004 Falcivibrio 30224004 Mobiluncus curtisii 30224004 Falcivibrio vaginalis 13716002 Mobiluncus mulieris 13716002 Falcivibrio grandis 71655003 Moellerella 37107002 Moellerella wisconsensis 37107002 CDC Enteric group 46 416887004 Mogibacterium 429898003 Mogibacterium diversum 429899006 Mogibacterium neglectum 417280000 Mogibacterium timidum 417280000 Eubacterium timidum 416225002 Mogibacterium vescum 36361003 Moraxella 47491001 Moraxella atlantae 47491001 CDC group M-3 113832008 Moraxella boevrei 19425003 Moraxella bovis 19425003 Hemophilus bovis 113833003 Moraxella canis 113834009 Moraxella caprae 24226003 Moraxella catarrhalis 24226003 Branhamella catarrhalis 24226003 Neisseria catarrhalis 24226003 Micrococcus catarrhalis 46450008 Moraxella cuniculi 46450008 Neisseria cuniculi 46450008 Branhamella cuniculi 84066001 Moraxella lacunata 84066001 Moraxella liquefaciens 113836006 Moraxella lincolnii 46455003 Moraxella nonliquefaciens 430486003 Moraxella oblonga 72401008 Moraxella osloensis 112332009 Moraxella ovis 112332009 Branhamella ovis 112332009 Neisseria ovis 50713005 Morganella 243301005 Morganella morganii 707293009 multidrug resistant Morganella morganii 114460006 Morganella morganii, biogroup 1 243303008 Morganella morganii sibonii 243368001 Mycobacterium 113844006 Mycobacterium brumae 113838007 Mycobacterium abscessus 113838007 Mycobacterium chelonae abscessus 705094007 Mycobacterium abscessus bolletii 705094007 Mycobacterium bolletii 705094007 Mycobacterium abscessus massiliense 705094007 Mycobacterium massiliense 51320008 Mycobacterium africanum 29111009 Mycobacterium agri 66940008 Mycobacterium aichiense 113839004 Mycobacterium alvei 44760001 Mycobacterium asiaticum 48134004 Mycobacterium aurum 27365009 Mycobacterium austroafricanum 83723009 Mycobacterium avium 58503001 Mycobacterium, avium-intracellulare group 58503001 Mycobacterium avium complex 430995003 Mycobacterium boenickei 430996002 Mycobacterium bohemicum 27142009 Mycobacterium bovis 113843000 Mycobacterium branderi 430998001 Mycobacterium brisbanense 432476008 Mycobacterium canariasense 432476008 Mycobacterium canariense 414789006 Mycobacterium canetti 430579009 Mycobacterium caprae 103475000 Mycobacterium celatum 243377008 Mycobacterium chelonae 243377008 Mycobacterium chelonae chelonae 243377008 Mycobacterium chelonei 430667000 Mycobacterium chesapeaki 89896008 Mycobacterium chitae 713611009 Mycobacterium chlorophenolicum 713611009 Rhodococcus chlorophenolicus 20498000 Mycobacterium chubuense 113845007 Mycobacterium confluentis 113846008 Mycobacterium conspicuum 113847004 Mycobacterium cookii 430580007 Mycobacterium cosmeticum 6199007 Mycobacterium diernhoferi 430581006 Mycobacterium doricum 66838002 Mycobacterium duvalii 385509008 Mycobacterium elephantis 9939008 Mycobacterium fallax 61708000 Mycobacterium farcinogenes 5885000 Mycobacterium flavescens 243378003 Mycobacterium fortuitum 243378003 Mycobacterium giae 243378003 Mycobacterium minetti 333873003 Mycobacterium fortuitum fortuitum 333873003 Mycobacterium ranae 103474001 Mycobacterium fortuitum complex 103474001 Mycobacterium fortuitum-chelonae complex 429917008 Mycobacterium frederiksbergense 74917007 Mycobacterium gadium 70463000 Mycobacterium gastri 103476004 Mycobacterium genavense 24618002 Mycobacterium gilvum 127522008 Mycobacterium goodii 24871004 Mycobacterium gordonae 24871004 Mycobacterium aquae 21996001 Mycobacterium haemophilum 21996001 Mycobacterium hemophilum 113848009 Mycobacterium hassiacum 429919006 Mycobacterium heckeshornense 429920000 Mycobacterium heidelbergense 113849001 Mycobacterium hiberniae 113850001 Mycobacterium hodleri 429946001 Mycobacterium holsaticum 429947005 Mycobacterium houstonense 428319005 Mycobacterium immunogenum 113851002 Mycobacterium interjectum 113852009 Mycobacterium intermedium 83841006 Mycobacterium intracellulare 83841006 Mycobacterium brunense 1507005 Mycobacterium kansasii 1507005 Mycobacterium luciflavum 36249008 Mycobacterium komossence 36249008 Mycobacterium komossense 427768005 Mycobacterium kubicae 429948000 Mycobacterium lacticola 430014001 Mycobacterium lacus 113853004 Mycobacterium lentiflavum 58242002 Mycobacterium leprae 113854005 Mycobacterium madagascariense 385507005 Mycobacterium mageritense 73576007 Mycobacterium malmoense 113855006 Mycobacterium margeritense 58869008 Mycobacterium marinum 58869008 Mycobacterium balnei 58869008 Mycobacterium platypoecilus 430739003 Mycobacterium massiliense 70801007 Mycobacterium microti 430740001 Mycobacterium montefiorense 9679001 Mycobacterium moriokaense 113856007 Mycobacterium mucogenicum 385506001 Mycobacterium murale 51459000 Mycobacterium neoaurum 430911006 Mycobacterium neworleansense 21433000 Mycobacterium nonchromogenicum 113857003 Mycobacterium novocastrense 41304005 Mycobacterium obuense 430912004 Mycobacterium palustre 909007 Mycobacterium parafortuitum 428856007 Mycobacterium parascrofulaceum 74028009 Mycobacterium paratuberculosis 74028009 Mycobacterium johnei 430913009 Mycobacterium parmense 113859000 Mycobacterium peregrinum 113859000 Mycobacterium fortuitum biovar peregrinum 78112006 Mycobacterium phlei 432888001 Mycobacterium phocaicum 430914003 Mycobacterium pinnipedii 91336002 Mycobacterium porcinum 429901002 Mycobacterium psychrotolerans 72130005 Mycobacterium rhodesiae 20141004 Mycobacterium scrofulaceum 20141004 Mycobacterium paraffinicum 20141004 Mycobacterium marianum 74212009 Mycobacterium senegalense 385508000 Mycobacterium septicum 429904005 Mycobacterium sherrisii 79817008 Mycobacterium shimoidei 430487007 Mycobacterium shottsii 84180005 Mycobacterium simiae 84180005 Mycobacterium habana 53114006 Mycobacterium smegmatis 78444002 Mycobacterium sphagni 65613000 Mycobacterium szulgai 45662006 Mycobacterium terrae 428765006 Mycobacterium terrae complex 20973006 Mycobacterium thermoresistibile 72477006 Mycobacterium tokaiense 72477006 Mycobacterium tokainse 113860005 Mycobacterium triplex 40333002 Mycobacterium triviale 113861009 Mycobacterium tuberculosis 113858008 Mycobacterium tuberculosis complex 113858008 Mycobacterium tuberculosis group 430489005 Mycobacterium tusciae 40713003 Mycobacterium ulcerans 54925005 Mycobacterium vaccae 430490001 Mycobacterium vanbaalenii 127523003 Mycobacterium wolinskyi 58663006 Mycobacterium xenopi 58663006 Mycobacterium littorale 58663006 Mycobacterium xenopei 78981005 Mycoplasma 78981005 Haemobartonella 112338008 Mycoplasma buccale 112338008 Mycoplasma orale type 2 76010005 Mycoplasma faucium 76010005 Mycoplasma orale type 3 88263009 Mycoplasma fermentans 88263009 Mycoplasma incognitus 5056007 Mycoplasma genitalium 1290001 Mycoplasma hominis 11412008 Mycoplasma lipophilum 46705005 Mycoplasma orale 46705005 Mycoplasma orale type 1 113884002 Mycoplasma penetrans 81314002 Mycoplasma pirum 58720004 Mycoplasma pneumoniae 112337003 Mycoplasma primatum 2654003 Mycoplasma salivarium 113890003 Mycoplasma spermatophilum 115127008 Myroides 113558001 Myroides odoratus 113558001 Flavobacterium odoratum 59083001 Neisseria 54978009 Neisseria canis 69312007 Neisseria cinerea 69312007 Micrococcus cinereus 69312007 Neisseria pharyngis 113896009 Neisseria dentiae 12638001 Neisseria elongata 113895008 Neisseria elongata nitroreducens 113895008 CDC group M-6 54127003 Neisseria elongata elongata 35693009 Neisseria elongata glycolytica 75566007 Neisseria flavescens 68704007 Neisseria gonorrhoeae 68704007 Gonococcus 113897000 Neisseria iguanae 54915000 Neisseria lactamica 112341004 Neisseria macacae 17872004 Neisseria meningitidis 17872004 Meningococcus 17872004 Neisseria intracellularis 103479006 Neisseria meningitidis serogroup A 103480009 Neisseria meningitidis serogroup B 103481008 Neisseria meningitidis serogroup C 103483006 Neisseria meningitidis serogroup W135 103482001 Neisseria meningitidis serogroup Y 81795000 Neisseria mucosa 723475000 Neisseria oralis 723475000 Neisseria mucosa var heidelbergensis 116412006 Neisseria perflava 66768001 Neisseria polysaccharea 49074002 Neisseria sicca 77700001 Neisseria subflava 113894007 Neisseria weaveri 113894007 Neisseria parelongata 58579003 Neorickettsia 423477000 Neorickettsia sennetsu 414331003 Nesterenkonia 113770004 Nesterenkonia halobia 113770004 Micrococcus halobius 59674005 Nocardia 414863003 Nocardia abscessus 417342004 Nocardia africana 472230801000087102 Nocardia anaemiae 444683006 Nocardia aobensis 430602008 Nocardia araoensis 427275005 Nocardia arthritidis 426054003 Nocardia asiatica 30092002 Nocardia asteroides 30092002 Actinomyces asteroides 414864009 Nocardia asteroides complex 430848001 Nocardia beijingensis 58970008 Nocardia brasiliensis 58970008 Actinomyces brasiliensis 70366009 Nocardia brevicatena 70366009 Micropolyspora brevicatena 61208001 Nocardia carnea 414866006 Nocardia cyriacigeorgica 414866006 Nocardia cyriacigeorgici 418717009 Nocardia elegans 85516007 Nocardia farcinica 430654003 Nocardia higoensis 430770006 Nocardia inohanensis 450468006 Nocardia kruczakiae 855085291000087109 Nocardia mexicana 430772003 Nocardia niigatensis 37621001 Nocardia nova 63087008 Nocardia otitis caviarum 63087008 Nocardia otitidiscaviarum 63087008 Nocardia caviae 414867002 Nocardia paucivorans 431063007 Nocardia pneumoniae 414868007 Nocardia pseudobrasiliensis 430672009 Nocardia sienata 430588000 Nocardia testacea 80379008 Nocardia transvalensis 414869004 Nocardia veterana 430661004 Nocardia yamanashiensis 23593005 Nocardiopsis 15526005 Nocardiopsis dassonvillei 15526005 Nocardia dassonvillei 15526005 Nocardia antarctica 15526005 Streptothrix dassonvillei 15526005 Actinomadura dassonvillei 416314008 Nocardiopsos synnemataformans 50732004 Obesumbacterium 28501001 Obesumbacterium proteus 116423005 Ochrobactrum 116490002 Ochrobactrum anthropi 116490002 CDC group Vd-1 414926008 Ochrobactrum intermedium 418523002 Odoribacter 446487001 Odoribacter splanchnicus 446487001 Bacteroides splanchnicus 81194007 Oerskovia 10459009 Oerskovia turbata 10459009 Cellulomonas turbata 112343001 Oligella 11309009 Oligella ureolytica 11309009 Oligella ureilytica 11309009 Oligella urealytica 11309009 CDC group IVe 90341001 Oligella urethralis 90341001 Moraxella urethralis 90341001 CDC group M-4 114232006 Orientia 114233001 Orientia tsutsugamushi 114233001 Rickettsia tsutsugamushi 114233001 Rickettsia orientalis 114233001 Theileria tsutsugamushi 114086007 Paenibacillus 429907003 Paenibacillus agaridevorans 114088008 Paenibacillus alvei 114088008 Bacillus alvei 8501000146105 Paenibacillus edaphicus 8501000146105 Bacillus edaphicus 114098002 Paenibacillus larvae 114098002 Bacillus larvae 114098002 Paenibacillus larvae larvae 414989004 Paenibacillus lentimorbus 414989004 Bacillus lentimorbus 114101003 Paenibacillus macerans 114101003 Bacillus macerans 114103000 Paenibacillus pabuli 114103000 Bacillus pabuli 114105007 Paenibacillus polymyxa 114105007 Bacillus polymyxa 414990008 Paenibacillus popilliae 414990008 Bacillus popilliae 114106008 Paenibacillus thiaminolyticus 114106008 Bacillus thiaminolyticus 445240003 Paenibacillus urinalis 114107004 Paenibacillus validus 114107004 Paenibacillus gordonae 114107004 Bacillus validus 414998001 Pandoraea 414999009 Pandoraea apista 415000009 Pandoraea norimbergensis 415001008 Pandoraea pnomenusa 415002001 Pandoraea pulmonicola 415004000 Pandoraea sputorum 115013001 Pantoea 115015008 Pantoea agglomerans 115015008 Enterobacter agglomerans group 115015008 Enterobacter agglomerans 115015008 Erwinia herbicola-Enterobacter agglomerans group 115014007 Pantoea ananatis 115014007 Erwinia ananas 115014007 Erwinia uredovora 115014007 Pantoea ananas 115017000 Pantoea dispersa 447036003 Parabacteroides 447512008 Parabacteroides distasonis 447512008 Bacteroides distasonis 5691000146107 Parabacteroides goldsteinii 5691000146107 Bacteroides goldsteinii 447513003 Parabacteroides merdae 447513003 Bacteroides merdae 723767007 Paraburkholderia 417285005 Paraburkholderia fungorum 417285005 Burkholderia fungorum 415013003 Paracoccus 415033004 Paracoccus yeei 415033004 CDC Group EO-2 431018006 Parascardovia 433344009 Parascardovia denticolens 430005006 Parvimonas 434293007 Parvimonas micra 87579009 Pasteurella 87075007 Pasteurella aerogenes 113902004 Pasteurella bettyae 113902004 Pasteurella bettii 113903009 Pasteurella caballi 7784009 Pasteurella canis 7784009 Pasteurella multocida biotype 6 80948000 Pasteurella dagmatis 10879005 Pasteurella multocida 1743002 Pasteurella multocida gallicida 71068007 Pasteurella multocida multocida 14298009 Pasteurella multocida septica 32562008 Pasteurella pneumotropica 46827009 Pasteurella stomatis 422013009 Pectobacterium 243236007 Pediococcus 243237003 Pediococcus acidilactici 243242006 Pediococcus pentosaceus 115128003 Pedobacter 113554004 Pedobacter heparinus 113554004 Sphingobacterium heparinum 113554004 Flavobacterium heparinum 113554004 Cytophaga heparina 113555003 Pedobacter piscium 113555003 Sphingobacterium piscium 20585006 Peptococcus 112344007 Peptococcus niger 112344007 Micrococcus niger 430742009 Peptoniphilus 433440001 Peptoniphilus asaccharolyticus 433373007 Peptoniphilus harei 433375000 Peptoniphilus ivorii 433376004 Peptoniphilus lacrimalis 243417000 Peptostreptococcus 19217002 Peptostreptococcus anaerobius 89268006 Peptostreptococcus asaccharolyticus 89268006 Peptococcus asaccharolyticus 89268006 Staphylococcus asaccharolyticus 19204000 Peptostreptococcus indolicus 19204000 Peptococcus indolicus 113909008 Peptostreptococcus lacrimalis 62890009 Peptostreptococcus micros 62890009 Peptococcus glycinophilus 62890009 Streptococcus micros 62890009 Micromonas micros 62890009 Streptococcus anaerobius micros 115046007 Photobacterium 387799003 Photobacterium damselae damselae 387799003 Vibrio damsela 387799003 CDC group EF5 115022000 Photorhabdus 415093002 Photorhabdus asymbiotica 115023005 Photorhabdus luminescens 115023005 Xenorhabdus luminescens 415094008 Photorhabdus temperata 42929008 Plesiomonas 38643006 Plesiomonas shigelloides 38643006 Aeromonas shigelloides 38643006 Pseudomonas shigelloides 716344002 Pluralibacter 716346000 Pluralibacter gergoviae 716346000 Enterobacter gergoviae 114154000 Porphyromonas 115950003 Porphyromonas asaccharolyticus 115950003 Bacteroides melaninogenicus asaccharolyticus 114156003 Porphyromonas cangingivalis 114157007 Porphyromonas canoris 114158002 Porphyromonas cansulci 114159005 Porphyromonas catoniae 114160000 Porphyromonas circumentaria 114160000 Porphyromonas circumdentaria 114161001 Porphyromonas crevioricanis 2401005 Porphyromonas endodontalis 2401005 Bacteroides endodontalis 114163003 Porphyromonas gingivalis 114163003 Bacteroides gingivalis 114164009 Porphyromonas gingivicanis 433019007 Porphyromonas gulae 114165005 Porphyromonas levii 114165005 Bacteroides levii 114166006 Porphyromonas macacae 114166006 Porphyromonas salivosa 114166006 Bacteroides macacae 114166006 Bacteroides salivosus 450442004 Porphyromonas somerae 115024004 Pragia 115025003 Pragia fontium 114129000 Prevotella 114131009 Prevotella bivia 114131009 Bacteroides bivius 114134001 Prevotella buccae 114134001 Bacteroides pentosaceus 114134001 Bacteroides buccae 114134001 Bacteroides capillus 114135000 Prevotella buccalis 114135000 Bacteroides buccalis 114136004 Prevotella corporis 114136004 Bacteroides corporis 114137008 Prevotella dentalis 114137008 Mitsuokella dentalis 114138003 Prevotella denticola 114138003 Bacteroides denticola 114139006 Prevotella disiens 114139006 Bacteroides disiens 114140008 Prevotella enoeca 114141007 Prevotella heparinolytica 114141007 Bacteroides heparinolyticus 114142000 Prevotella intermedia 114142000 Bacteroides intermedius 114142000 Bacteroides melaninogenicus intermedius 114143005 Prevotella loescheii 417919003 Prevotella marshii 114144004 Prevotella melaninogenica 114144004 Bacteroides melaninogenicus 418615005 Prevotella multiformis 418858007 Prevotella multisaccharivorax 114145003 Prevotella nigrescens 114146002 Prevotella oralis 114146002 Bacteroides oralis 440091000124102 Prevotella oralis group 114147006 Prevotella oris 114147006 Bacteroides oris 419466004 Prevotella oulorum 419466004 Bacteroides oulorum 419466004 Prevotella oulora 114149009 Prevotella pallens 115949003 Prevotella ruminicola 115949003 Bacteroides ruminicola 115949003 Bacteroides ruminicola brevis 115949003 Prevotella ruminicola ruminicola 418278009 Prevotella salivae 419720005 Prevotella shahii 114151008 Prevotella tannerae 114152001 Prevotella veroralis 114152001 Bacteroides veroralis 34844008 Propionibacterium 2379005 Propionibacterium acidipropionici 2379005 Propionibacterium arabinosum 2379005 Propionibacterium pentosaceum 2379005 Propionibacterium acidi-propionici 39473003 Propionibacterium acnes 39473003 Corynebacterium acnes 39473003 Corynebacterium anaerobium 39473003 Corynebacterium diphtheroides 39473003 Corynebacterium parvum 433037008 Propionibacterium australiense 47473006 Propionibacterium avidum 113916009 Propionibacterium cyclohexanicum 23871008 Propionibacterium freudenreichii 113917000 Propionibacterium freudenreichii fredenreichii 113917000 Propionibacterium freudenreichii freudenreichii 113918005 Propionibacterium freudenreichii shermanii 87755005 Propionibacterium granulosum 86720000 Propionibacterium jensenii 86720000 Propionibacterium petersonii 86720000 Propionibacterium raffinosaceum 86720000 Propionibacterium technicum 86720000 Propionibacterium zeae 26102005 Propionibacterium lymphophilum 431383004 Propionibacterium microaerophilum 113919002 Propionibacterium prionicus 427413007 Propionibacterium propionicum 427413007 Actinomyces propionicus 427413007 Arachnia propionica 30087004 Propionibacterium thoenii 30087004 Propionibacterium rubrum 114055001 Propioniferax 114056000 Propioniferax innocus 114056000 Propionibacterium innocuum 429177000 Propionimicrobium 429395008 Propionimicrobium lymphophilum 50517009 Proteus 417592004 Proteus hauseri 417592004 Proteus vulgaris biogroup 3 73457008 Proteus mirabilis 714314003 multiple drug-resistant Proteus mirabilis 713929002 Extended spectrum beta-lactamase producing Proteus mirabilis 86145008 Proteus myxofaciens 45298005 Proteus penneri 45298005 Proteus vulgaris biogroup 1 45298005 Proteus vulgaris indole negative 45834001 Proteus vulgaris 112284001 Providencia 46349009 Providencia alcalifaciens 46349009 Proteus inconstans, subgroup A 47300009 Providencia heimbachae 47300009 Providencia haimbachae 14196002 Providencia rettgeri 14196002 Proteus rettgeri 19196004 Providencia rustigianii 19196004 Providencia alcalifaciens biogroup 3 19196004 Providencia friedericiana 1445008 Providencia stuartii 1445008 Proteus inconstans, subgroup B 440171004 Pseudoclavibacter 447037007 Pseudoflavonifractor 447428000 Pseudoflavonifractor capillosus 447428000 Bacteroides capillosus 57032008 Pseudomonas 52499004 Pseudomonas aeruginosa 52499004 Pseudomonas pyocyaneus 710332005 multidrug resistant Pseudomonas aeruginosa 46247008 Pseudomonas alcaligenes 63949003 Pseudomonas chlororaphis 63949003 Bacillus chlororaphis 39289003 Pseudomonas fluorescens 116414007 Pseudomonas marginalis 59419001 Pseudomonas mendocina 59419001 CDC group Vb-2 113930004 Pseudomonas monteilii 437937006 Pseudomonas mosselii 113931000 Pseudomonas oryzihabitans 113931000 Flavimonas oryzihabitans 17191002 Pseudomonas pertucinogena 17191002 Bordetella pertussis rough phase IV 30955004 Pseudomonas pseudoalcaligenes 30955004 Pseudomonas alcaligenes biotype B 68608003 Pseudomonas putida 68608003 Arthrobacter siderocapsulatus 90187004 Pseudomonas, group VA-1 90187004 Pseudomonas denitrificans 58024003 Pseudomonas stutzeri 58024003 Pseudomonas perfectomarina 58024003 Pseudomonas perfectomarinus 58024003 Pseudomonas chloritidismutans 58024003 CDC group Vb-1 113940001 Pseudomonas veronii 115131002 Pseudoramibacter 113828002 Pseudoramibacter alactolyticus 113828002 Eubacterium alactolyticum 428474009 Pseudoxanthomonas 698063009 Pseudoxanthomonas koreensis 34412002 Psychrobacter 70465007 Psychrobacter immobilis 70465007 Micrococcus cryophilus 113941002 Psychrobacter phenylpyruvicus 113941002 Moraxella phenylpyruvica 113941002 Moraxella polymorpha 48569008 Rahnella 10021006 Rahnella aquatilis 10021006 Rahnella genomospecies 1 415234001 Ralstonia 415235000 Ralstonia insidiosa 415236004 Ralstonia mannitolilytica 415236004 Pseudomonas thomasii 415236004 Ralstonia thomasii 116198003 Ralstonia paucula 114053008 Ralstonia pickettii 114053008 Burkholderia pickettii 114053008 Pseudomonas pickettii 114053008 Ralstonia picketti 417468005 Raoultella 416832000 Raoultella ornithinolytica 416832000 Klebsiella ornithinolytica 416264004 Raoultella planticola 416264004 Klebsiella planticola 416264004 Klebsiella trevisanii 416096003 Raoultella terrigena 416096003 Klebsiella terrigena 415303003 Rhizobium 438107000 Rhizobium radiobacter 438107000 Agrobacterium radiobacter 438073004 Rhizobium rubi 438218005 Rhizobium vitis 34534002 Rhodococcus 80771008 Rhodococcus equi 80771008 Corynebacterium equi 22478004 Rhodococcus erythropolis 28901005 Rhodococcus fascians 28901005 Rhodococcus luteus 28901005 Corynebacterium fascians 44348004 Rhodococcus globerulus 430885009 Rhodococcus gordoniae 54379008 Rhodococcus rhodochrous 54379008 Rhodococcus roseus 62065006 Rickettsia 30769009 Rickettsia akari 32691002 Rickettsia conorii 85738007 Rickettsia parkeri 28499009 Rickettsia prowazekii 18054009 Rickettsia rickettsii 18054009 Rickettsia rickettsii, spotted fever group 85288000 Rickettsia sibirica 79284001 Rickettsia typhi 79284001 Rickettsia mooseri 115145008 Riemerella 113658005 Riemerella anatipestifer 113658005 Moraxella anatipestifer 113658005 Pasteurella anatipestifer 450447005 Robinsoniella 450448000 Robinsoniella peoriensis 115159001 Roseomonas 115159001 Teichococcus 113711006 Roseomonas cervicalis 113710007 Roseomonas gilardii 415351006 Roseomonas mucosa 90163001 Rothia 35379007 Rothia dentocariosa 35379007 Actinomyces dentocariosus 416544005 Rothia mucilaginosa 416544005 Stomatococcus mucilaginosus 28907009 Ruminococcus 88513000 Ruminococcus gnavus 450458001 Rummeliibacillus 450459009 Rummeliibacillus pycnus 450459009 Bacillus pycnus 103501008 Saccharomonospora 103505004 Saccharomonospora viridis 115144007 Saccharopolyspora 113657000 Saccharopolyspora rectivirgula 27268008 Salmonella 398393000 Salmonella bongori 110378009 Salmonella enterica 58039002 Sarcina 22267009 Sarcina ventriculi 438181001 Scardovia 441142005 Scardovia inopinata 85986007 Selenomonas 6754006 Selenomonas artemidis 86435000 Selenomonas dianae 27333006 Selenomonas flueggei 43571005 Selenomonas infelix 70096005 Selenomonas noxia 23595003 Selenomonas sputigena 115162003 Serpulina 243385004 Serpulina jonesii 243385004 Serpula jonesii 243385004 Treponema jonesii 42025004 Serratia 76656001 Serratia entomophila 802004 Serratia ficaria 112329006 Serratia fonticola 115005002 Serratia grimesii 23787004 Serratia liquefaciens 23787004 Enterobacter liquefaciens 33522002 Serratia marcescens 115006001 Serratia marcescens, Biogroup I 10413007 Serratia odorifera 397075007 Serratia odorifera biogroup 1 397076008 Serratia odorifera biogroup 2 28955009 Serratia plymuthica 116135003 Serratia proteamaculans 116136002 Serratia proteamaculans proteamaculans 115004003 Serratia proteamaculans quinovora 438199009 Serratia quinivorans 55825002 Serratia rubidaea 55825002 Serratia marinorubra 450416004 Serratia ureilytica 115158009 Shewanella 113702006 Shewanella algae 113700003 Shewanella putrefaciens 113700003 Pseudomonas putrefaciens 77352002 Shigella 55462008 Shigella boydii 55462008 Shigella biogroup C 43612004 Shigella dysenteriae 43612004 Shiga's bacillus 43612004 Shigella biogroup A 85729005 Shigella flexneri 85729005 Flexner-Strong bacillus 85729005 Shigella biogroup B 4298009 Shigella sonnei 4298009 Shigella biogroup D 721911002 Extended spectrum beta-lactamase producing Shigella sonnei 16344005 Simonsiella 74269008 Simonsiella muelleri 432913003 Slackia 434236002 Slackia exigua 434236002 Eubacterium exiguum 437984006 Slackia heliotrinireducens 416469007 Sneathia 416737004 Sneathia sanguinegens 699375003 Solibacillus 429471007 Solibacillus silvestris 429471007 Bacillus silvestris 415558001 Solobacterium 413348001 Solobacterium moorei 43780008 Sphingobacterium 113952008 Sphingobacterium antarcticum 113952008 Sphingobacterium antarcticus 113953003 Sphingobacterium faecium 51595006 Sphingobacterium multivorum 51595006 CDC group IIk-2 51595006 Flavobacterium multivorum 61675006 Sphingobacterium spiritivorum 61675006 Flavobacterium spiritivorum 61675006 Flavobacterium yabuuchiae 61675006 Sphingobacterium versatilis 61675006 CDC group IIk-3 61675006 Pseudomonas, group IIK-2 113954009 Sphingobacterium thalpophilum 113954009 Flavobacterium thalpophilum 243347002 Sphingobacterium yabuuchiae 115130001 Sphingomonas 243349004 Sphingomonas parapaucimobilis 243350004 Sphingomonas paucimobilis 243350004 Flavobacterium paucimobilis 243350004 Pseudomonas paucimobilis 243350004 CDC group IIk-1 54700005 Spirillum 35164008 Spirillum minus 35164008 Spirillum minor 35164008 Spirilla morsus minus 35164008 Spirochaeta morsus minus 35164008 Spirochaeta muris 439462006 Sporolactobacillus 8331000146107 Sporolactobacillus laevolacticus 8331000146107 Bacillus laevolacticus 115164002 Sporosarcina 65119002 Staphylococcus 72465001 Staphylococcus arlettae 3092008 Staphylococcus aureus 3092008 Staphylococcus pyogenes citreus 3092008 Staphylococcus pyogenes aureus 3092008 Micrococcus pyogenes var aureus 115329001 Methicillin-resistant Staphylococcus aureus 45654003 Staphylococcus auricularis 40347003 Staphylococcus capitis 113962001 Staphylococcus capitis capitis 103492009 Staphylococcus capitis urealyticus 76969000 Staphylococcus caprae 9784002 Staphylococcus carnosus 438905007 Staphylococcus carnosus carnosus 438733001 Staphylococcus carnosus utilis 56629004 Staphylococcus chromogenes 56629004 Staphylococcus hyicus chromogenes 116197008 Staphylococcus, coagulase negative 127535004 Staphylococcus, coagulase positive 66872005 Staphylococcus cohnii 113963006 Staphylococcus cohnii cohnii 103493004 Staphylococcus cohnii urealyticus 439185000 Staphylococcus condimenti 113964000 Staphylococcus delphini 60875001 Staphylococcus epidermidis 60875001 Micrococcus pyogenes var albus 60875001 Staphylococcus albus 60875001 Staphylococcus epidermidis albus 264402002 Elastase-producing strain Staphylococcus epidermidis 28217008 Staphylococcus equorum 438005005 Staphylococcus equorum equorum 438164005 Staphylococcus equorum linens 113965004 Staphylococcus felis 438257002 Staphylococcus fleurettii 8056006 Staphylococcus gallinarum 83452006 Staphylococcus haemolyticus 83452006 Staphylococcus hemolyticus 44827007 Staphylococcus hominis 432505008 Staphylococcus hominis hominis 438202004 Staphylococcus hominis novobiosepticus 19683001 Staphylococcus hyicus 19683001 Staphylococcus hyicus hyicus 34605002 Staphylococcus intermedius 53227003 Staphylococcus kloosii 40253001 Staphylococcus lentus 40253001 Staphylococcus sciuri lentus 103494005 Staphylococcus lugdunensis 113968002 Staphylococcus lutrae 113969005 Staphylococcus muscae 438681002 Staphylococcus nepalensis 103495006 Staphylococcus pasteuri 428731005 Staphylococcus pettenkoferi 113970006 Staphylococcus piscifermentans 427316000 Staphylococcus pseudintermedius 41103009 Staphylococcus saccharolyticus 41103009 Peptococcus saccharolyticus 19743000 Staphylococcus saprophyticus 19743000 Micrococcus subgroup 3 113972003 Staphylococcus saprophyticus bovis 113973008 Staphylococcus saprophyticus saprophyticus 131360000 Staphylococcus schleiferi 113974002 Staphylococcus schleiferi coagulans 103496007 Staphylococcus schleiferi schleiferi 70806002 Staphylococcus sciuri 113975001 Staphylococcus sciuri carnaticus 113976000 Staphylococcus sciuri rodentium 113977009 Staphylococcus scuiri scuiri 52122005 Staphylococcus simulans 243228003 Staphylococcus simulans biovar staphylolyticus 438729008 Staphylococcus succinus 440815004 Staphylococcus succinus casei 441130000 Staphylococcus succinus succinus 440569005 Staphylococcus vitulinus 440569005 Staphylococcus pulvereri 113978004 Staphylococcus vitulus 63550006 Staphylococcus warneri 32737005 Staphylococcus xylosus 115656007 Stenotrophomonas 113697002 Stenotrophomonas maltophilia 113697002 Pseudomonas maltophilia 113697002 Pseudomonas betle 113697002 Xanthomonas maltophilia 113697002 Pseudomonas beteli 29295005 Streptobacillus 16372003 Streptobacillus moniliformis 16372003 Haverhillia moniliformis 16372003 Haverhillia multiformis 58800005 Streptococcus 51182006 Streptococcus acidominimus 34228005 Streptococcus alactolyticus 34228005 Streptococcus intestinalis 44304009 Streptococcus anginosus 415597009 Streptococcus anginosus group 415597009 Streptococcus anginosis milleri group 415597009 Streptococcus milleri group 70160008 Streptococcus anginosus-constellatus 415598004 Streptococcus australis 415599007 Streptococcus bovis group 88231003 Streptococcus canis 76199005 Streptococcus constellatus 415601009 Streptococcus constellatus constellatus 415602002 Streptococcus constellatus pharyngis 34838009 Streptococcus criceti 34838009 Streptococcus mutans serotype a 113980005 Streptococcus cristatus 113980005 Streptococcus crista 708952006 Streptococcus dentisani 12704003 Streptococcus dolonei 12704003 Streptococcus downei 12704003 Streptococcus mutans serotype h 40812000 Streptococcus dysgalactiae 113982002 Streptococcus dysgalactiae dysgalactiae 128338004 Streptococcus dysgalactiae equisimilis 437956001 Streptococcus entericus 12447002 Streptococcus equi 113984001 Streptococcus equi equi 33708000 Streptococcus equi zooepidemicus 33708000 Streptococcus pyogenes animalis 33708000 Streptococcus zooepidemicus 72646003 Streptococcus equinus 10049004 Streptococcus ferus 10049004 Streptococcus mutans ferus 113985000 Streptococcus gallolyticus 113985000 Streptococcus caprinus 113985000 Streptococcus bovis biotype I 421544007 Streptococcus gallolyticus gallolyticus 421004005 Streptococcus gallolyticus macedonicus 421253004 Streptococcus gallolyticus pasteurianus 421253004 Streptococcus pasteurianus 421253004 Streptococcus bovis biovar II2 113986004 Streptococcus gordonii 113988003 Streptococcus hyovaginalis 415603007 Streptococcus infantarius 415603007 Streptococcus bovis biotype II 432506009 Streptococcus infantarius infantarius 415604001 Streptococcus infantis 79050007 Streptococcus iniae 79050007 Streptococcus shiloi 62170002 Streptococcus intermedius 415605000 Streptococcus lutetiensis 415605000 Streptococcus infantarius coli 59717000 Streptococcus macacae 57997003 Streptococcus mitis 57997003 Streptococcus mitior 127539005 Streptococcus mitis group 214001 Streptococcus mutans 214001 Streptococcus mutans aggregate 127536003 Streptococcus mutans group 440296007 Streptococcus oligofermentans 19870004 Streptococcus oralis 438035003 Streptococcus ovis 113990002 Streptococcus parasanguinis 113990002 Streptococcus parasanguis 113991003 Streptococcus parauberis 416347004 Streptococcus peroris 32134008 Streptococcus pleomorphus 9861002 Streptococcus pneumoniae 9861002 Diplococcus pneumoniae 9861002 Pneumococcus 59512008 Streptococcus porcinus 420470004 Streptococcus pseudopneumoniae 429189003 Streptococcus pseudoporcinus 80166006 Streptococcus pyogenes 80166006 Streptococcus, group A 10667007 Streptococcus ratti 10667007 Streptococcus mutans serotype b 10667007 Streptococcus rattus 39888004 Streptococcus salivarius 127537007 Streptococcus salivarius group 84684000 Streptococcus salivarius salivarius 23310006 Streptococcus salivarius thermophilus 23310006 Streptococcus thermophilus 113993000 Streptococcus sanguinis 113993000 Streptococcus sanguis 115658008 Streptococcus sanguinis group 115658008 Streptococcus sanguis group 42985004 Streptococcus sanguis II 42985004 Streptococcus sanguis type II 438909001 Streptococcus sinensis 43777007 Streptococcus sobrinus 43777007 Streptococcus mutans sobrinus 7912006 Streptococcus suis 699479005 Streptococcus tigurinus 13250005 Streptococcus uberis 113998009 Streptococcus vestibularis 43492007 Group B streptococcus 43492007 Streptococcus difficilis 43492007 Streptococcus agalactiae 89181007 Streptococcus, group C 55547008 Streptococcus, group D 37916002 Streptococcus, group E 83503005 Streptococcus, group F 83503005 Streptococcus milleri group F 75012005 Streptococcus, group G 61056002 Streptococcus, group L 60631002 Alpha-hemolytic streptococcus 442131000124101 Alpha-hemolytic Streptococcus, not S pneumoniae 413643004 Beta-hemolytic Streptococcus, group A 406609007 Beta-hemolytic streptococcus, non-Group A, non-Group B 53490009 Beta-hemolytic streptococcus 415534000 Small-colony-forming beta-hemolytic group A streptococci 415534000 Streptococcus milleri group A 415535004 Small-colony-forming beta-hemolytic group C streptococci 415535004 Streptococcus milleri group C 415536003 Small-colony-forming beta-hemolytic group G streptococci 415536003 Streptococcus milleri group G 22339002 Gamma-hemolytic streptococcus 22339002 Non-hemolytic streptococcus 31703004 Streptococcus, viridans group 31703004 Streptococcus viridans 698214003 Nutritionally variant streptococci 47304000 Streptomyces 47304000 Kitasatoa 114001000 Streptomyces albus 438930005 Streptomyces bikiniensis 438237001 Streptomyces candidus 438736009 Streptomyces clavuligerus 438231000 Streptomyces filamentosus 438231000 Streptomyces roseosporus 114000004 Streptomyces griseus 114000004 Streptomyces caviscabies 114000004 Streptomyces setonii 114000004 Streptomyces erumpens 437827000 Streptomyces lincolnensis 11007001 Streptomyces somaliensis 438852000 Streptomyces spectabilis 437780007 Streptomyces thermovulgaris 66591004 Streptomyces venezuelae 66866005 Succinivibrio 63902002 Succinivibrio dextrinosolvens 417407002 Sutterella 417645005 Sutterella wadsworthensis 116391002 Suttonella 116392009 Suttonella indologenes 116392009 Kingella indologenes 419107003 Tannerella 420048009 Tannerella forsythia 420048009 Tannerella forsythensis 116378003 Tatlockia 12162005 Tatumella 1546007 Tatumella ptyseos 1546007 CDC group E9 417005000 Tetragenococcus 438324001 Tetragenococcus halophilus 431990001 Tetragenococcus solitarius 431990001 Enterococcus solitarius 28042005 Thermoactinomyces 37421007 Tissierella 75376009 Tissierella praeacuta 75376009 Bacteroides praeacutus 75376009 Bacteroides praeacuta 243308004 Trabulsiella 243309007 Trabulsiella guamensis 243309007 CDC Enteric group 90 30345008 Treponema 14562002 Treponema carateum 72904005 Treponema pallidum 72904005 Spirochaeta pallida 44106000 Treponema pallidum endemicum 43454006 Treponema pallidum pallidum 6246005 Treponema pallidum pertenue 6246005 Treponema pertenue 417733009 Tropheryma 417060007 Tropheryma whipplei 704974007 Trueperella 704975008 Trueperella bernardiae 704975008 Actinomyces bernardiae 704975008 Arcanobacterium bernardiae 258933002 Trueperella pyogenes 258933002 Arcanobacterium pyogenes 258933002 Actinomyces pyogenes 258933002 Corynebacterium pyogenes 115135006 Tsukamurella 113509000 Tsukamurella inchonensis 113510005 Tsukamurella paurometabola 113510005 Rhodococcus aurantiacus 113510005 Corynebacterium paurometabolum 113511009 Tsukamurella pulmonis 417316004 Tsukamurella strandjordii 113512002 Tsukamurella tyrosinosolvens 438726001 Turicibacter 440839009 Turicibacter sanguinis 415762009 Turicella 415763004 Turicella otitidis 29680004 Ureaplasma 29680004 Mycoplasma, T strains 438391000 Ureaplasma parvum 12006007 Ureaplasma urealyticum 12006007 T-mycoplasma 116416009 Vagococcus 116418005 Vagococcus fluvialis 29875005 Veillonella 21633009 Veillonella atypica 63486005 Veillonella caviae 77243008 Veillonella criceti 77243008 Veillonella alcalescens criceti 29564004 Veillonella dispar 438330001 Veillonella montpellierensis 90435009 Veillonella parvula 90435009 Staphylococcus parvulus 90435009 Veillonella alcalescens 4427009 Veillonella ratti 4427009 Veillonella alcalescens ratii 78654008 Veillonella rodentium 34872001 Vibrio 45749000 Vibrio alginolyticus 45749000 Beneckea alginolytica 75953000 Vibrio cholerae 75953000 Vibrio comma 75953000 Vibrio albensis 62987004 Vibrio cholerae, O1 62987004 Vibrio cholerae serogroup O1 398506000 Vibrio cholerae, non-O1 398506000 nonagglutinating Vibrio 36764009 Vibrio cincinnatiensis 43199008 Vibrio fluvialis 6387008 Vibrio furnissii 84003007 Vibrio harveyi 84003007 Beneckea harveyi 84003007 Lucibacterium harveyi 84003007 Vibrio carchariae 84003007 Vibrio trachuri 28382009 Vibrio metschnikovii 28382009 Vibrio cholerae biovar proteus 11776003 Vibrio mimicus 11736008 Vibrio parahaemolyticus 11736008 Beneckea parahaemolytica 55905000 Vibrio vulnificus 55905000 Beneckea vulnifica 114108009 Virgibacillus 114109001 Virgibacillus pantothenticus 114109001 Bacillus pantothenticus 415834009 Wautersia 28853003 Weeksella 83326004 Weeksella virosa 83326004 Flavobacterium, group IIf 83326004 CDC group IIf 118293006 Weissella 113639001 Weissella confusa 113639001 Lactobacillus confusus 84909009 Wolinella 32360004 Wolinella succinogenes 32360004 Vibrio succinogenes 21544006 Xanthomonas 22423005 Xenorhabdus 57111002 Xenorhabdus nematophila 4668009 Yersinia 91246002 Yersinia aldovae 450391006 Yersinia aleksiciae 103434007 Yersinia bercovieri 103434007 Yersinia enterocolitica biogroup 3a 65255000 Yersinia enterocolitica 65255000 Pasteurella enterocolitica 85159008 Yersinia frederiksenii 10334001 Yersinia intermedia 91042006 Yersinia kristensenii 103435008 Yersinia mollaretii 103435008 Yersinia enterocolitica biogroup 3b 103435008 Yersinia mollareti 54365000 Yersinia pestis 54365000 Pasteurella pestis 54365000 Yersinia pseudotuberculosis pestis 90530002 Yersinia pseudotuberculosis 90530002 Pasteurella pseudotuberculosis 90530002 Yersinia pseudotuberculosis pseudotuberculosis 87145000 Yersinia rohdei 64125009 Yersinia ruckeri 14943005 Yokenella 14943005 Koserella 89477001 Yokenella regensburgei 89477001 CDC Enteric group 45 89477001 Koserella trabulsii 53932007 Gram-negative coccobacillus 83410001 Gram-negative diplococcus 73460001 Gram-negative pleomorphic bacillus 49682003 Gram-positive coccobacillus 11471007 Gram-positive diplococcus 301781002 Gram-variable coccus 301782009 Gram-variable coccobacillus 243288000 Gram-variable bacillus 87172008 Gram-negative bacillus 243312005 Gram-negative bacillus, fermentative 243328000 Gram-negative bacillus, non-fermentative 18383003 Gram-negative coccus 83514008 Gram-positive bacillus 59206002 Gram-positive coccus 27471002 Aerobe 59343002 Anaerobe 243386003 Anaerobic Gram-negative bacillus 243397003 Anaerobic Gram-negative coccus 445380009 Anaerobic Gram-negative coccobacillus 243398008 Anaerobic Gram-positive bacillus 243416009 Anaerobic Gram-positive coccus 445381008 Anaerobic Gram-positive coccobacillus 77309002 Coliform bacteria 106544002 Enterobacteriaceae 106544002 Enteric bacteria 54642001 Diphtheroids 44661006 Diphtheroids, aerobic 26481006 Diphtheroids, anaerobic 397426001 Corynebacterium, toxigenic 116442009 coryneform gram positive bacilli 243365003 Acid-fast bacillus 116494006 Rapid growing mycobacteria 63996006 Acremonium 63996006 Cephalosporium 83075006 Acremonium alabamensis 243484001 Acremonium kiliense 243484001 Cephalosporium kiliense 36128004 Acremonium potroni 36128004 Acremonium potronii 36128004 Cephalosporium potronii 654006 Acremonium recifei 654006 Cephalosporium recifei 17720002 Acremonium strictum 17720002 Cephalosporium strictum 75059003 Alternaria 75059003 Macrosporium 36703000 Alternaria alternata 36703000 Alternaria tenuis 28387003 Alternaria dianthicola 21702003 Alternaria infectoria 35667002 Alternaria tenuissima 68038008 Apophysomyces 71235006 Apophysomyces elegans 11860003 Arthroderma 11860003 Nannizzia 112406004 Arthrographis 112406004 Oidiodendron 2429008 Aspergillus 21477007 Aspergillus candidus 87240002 Aspergillus clavatus 4204003 Aspergillus deflectus 54120001 Aspergillus flavipes 66821001 Aspergillus flavus 32684000 Aspergillus fumigatus 19556009 Aspergillus glaucus 60264008 Aspergillus nidulans 89354002 Aspergillus niger 18651002 Aspergillus niveus 60111002 Aspergillus ochraceus 35805009 Aspergillus oryzae 57685002 Aspergillus parasiticus 12871004 Aspergillus restrictus 46388006 Aspergillus sydowii 26406003 Aspergillus terreus 23179008 Aspergillus ustus 48315007 Aspergillus versicolor 26030007 Aspergillus wentii 34121008 Aureobasidium 34121008 Pullularia 39129008 Aureobasidium pullulans 39129008 Pullularia pullulans 26217004 Basidiobolus 68673006 Basidiobolus ranarum 68673006 Basidiobolus haptosporus 68673006 Basidiobolus heterosporus 68673006 Basidiobolus meristosporus 66193005 Beauveria 40056004 Beauveria alba 65562008 Beauveria bassiana 24145000 Bipolaris 80923003 Bipolaris australiensis 80923003 Drechslera australiensis 80923003 Helminthosporium australiensis 31335001 Bipolaris hawaiiense 31335001 Bipolaris hawaiiensis 31335001 Drechslera hawaiiensis 31335001 Helminthosporium hawaiiensis 88228004 Bipolaris spicifera 88228004 Brachycladium spiciferum 88228004 Curvularia speciferum 88228004 Curvularia spicifera 88228004 Drechslera spicifera 88228004 Helminthosporium spiciferum 65205008 Blastomyces 65615007 Blastomyces dermatitidis 65615007 Chrysosporium dermatitidis 48211001 Blastoschizomyces 3265006 Candida 3265006 Monilia 3265006 Torulopsis 53326005 Candida albicans 53326005 Oidium albicans 53326005 Monilia albicans 3491000146109 Candida auris 47931009 Torulopsis candida 47931009 Torulopsis famata 47931009 Candida candida 283868009 Candida catenulata 283868009 Candida ravautii 283868009 Candida brumptii 283867004 Candida ciferrii 115952006 Candida dubliniensis 415888004 Candida famata 444877006 Candida glabrata 444877006 Torulopsis glabrata 16557001 Candida guilliermondii 283874009 Candida guilliermondii var membranaefaciens 243452008 Candida haemulonii 243452008 Torulopsis haemulonii 283871001 Candida inconspicua 283871001 Torulopsis inconspicua 243455005 Candida intermedia 446237006 Candida kefyr 76995003 Candida krusei 116458007 Candida lambica 63775007 Candida lipolytica 63775007 Azymoprocandida lipolytica 63775007 Mycotorula lipolytica 63775007 Torula lipolytica 47608006 Candida lusitaniae 47608006 Candida parapsilosis var obtusa 47608006 Candida obtusa 3681000146109 Candida nivariensis 243458007 Candida norvegensis 61302002 Candida parapsilosis 61302002 Candida parakrusei 702328004 Candida pararugosa 702328004 Cryptococcus aggregatus 702328004 Torulopsis aggregata 115953001 Candida pelliculosa 283870000 Candida pintolopesii 283870000 Torulopsis pintolopesii 283870000 Candida slooffii 243459004 Candida pulcherrima 23773004 Candida rugosa 446283000 Candida sake 20849004 Candida stellatoidea 20849004 Candida albicans var stellatoidea 47885008 Candida tropicalis 47885008 Candida paratropicalis 243464000 Candida utilis 243464000 Cryptococcus utilis 243464000 Torula utilis 243464000 Torulopsis utilis 243464000 Torulopsis utilis var utilis 45362004 Candida vini 243465004 Candida viswanathii 243466003 Candida zeylanoides 10210008 Chaetomium 415894007 Chaetomium atrobrunneum 38270005 Chaetomium globosum 55038006 Chrysosporium 55038006 Aleurisma 55038006 Emmonsia 55038006 Glenosporella 415897000 Cladophialophora 415898005 Cladophialophora bantiana 32043002 Cladosporium 32043002 Hormodendrum 21121003 Cladosporium cladosporioides 3459008 Cladosporium herbarum 19358006 Cladosporium sphaerospermum 8672004 Coccidioides 23439005 Coccidioides immitis 23439005 Malbranchea state of Coccidioides immitis 406645005 Coccidioides posadasii 406645005 Non-California Coccidioides immitis 22539001 Cokeromyces 30049007 Cokeromyces recurvatus 42178002 Conidiobolus 42178002 Entomophthora 15684003 Conidiobolus coronatus 15684003 Entomophthora coronata 55952006 Conidiobolus incongruus 416782000 Coniothyrium 17579001 Cryptococcus 74062009 Cryptococcus albidus 52343001 Cryptococcus gastricus 450862004 Cryptococcus gattii 450862004 Cryptococcus bacillisporus 419816002 Cryptococcus humicola 419816002 Candida humicola 7299008 Cryptococcus laurentii 67168003 Cryptococcus neoformans 67168003 Torula histolytica 67168003 Cryptococcus hominis 67168003 Leucosporidium neoformans 41637000 Cryptococcus terreus 112402002 Cryptococcus uniguttulatus 24861001 Cunninghamella 60182000 Cunninghamella bertholletiae 5214001 Curvularia 22068007 Curvularia geniculata 33165007 Curvularia lunata 10151000087104 Cyberlindnera fabianii 10151000087104 Candida fabianii 10151000087104 Hansenula fabianii 10151000087104 Pichia fabianii 73185003 Drechslera 20581002 Enterocytozoon 7633000 Epicoccum 112403007 Epidermophyton 12210004 Exophiala 415908000 Exophiala bergeri 38224003 Exophiala jeanselmei 38224003 Phialophora jeanselmei 38224003 Phialophora gougerotii 66283007 Exophiala spinifera 66283007 Phialophora spinifera 66283007 Rhinocladiella spinifera 83801002 Exophiala werneckii 83801002 Cladosporium werneckii 83801002 Phaeoannellomyces werneckii 83801002 Sarcinomyces werneckii 83801002 Hortaea werneckii 83801002 Phaeoannelomyces werneckii 78813003 Exserohilum 76951009 Exserohilum rostratum 76951009 Drechslera rostrata 76951009 Helminthosporium rostratum 76951009 Helminthosporium halodes 76951009 Drechslera halodes 23639003 Fonsecaea 76124007 Fonsecaea compacta 76124007 Fonsecaea compactum 76124007 Phialophora compacta 76124007 Phialophora compactum 76124007 Rhinocladiella compacta 76124007 Rhinocladiella compactum 69356007 Fonsecaea pedrosoi 69356007 Phialophora pedrosoi 69356007 Rhinocladiella pedrosoi 35238009 Fusarium 79265004 Fusarium chlamydosporum 15773001 Fusarium culmorum 62624005 Fusarium dimerum 11090009 Fusarium graminearum 11090009 Fusarium roseum 58429004 Fusarium moniliforme 38836002 Fusarium oxysporum 36116007 Fusarium poae 243549003 Fusarium proliferatum 243549003 Fusarium moniforme var intermedium 29238009 Fusarium semitectum 46351008 Fusarium solani 46351008 Fusarium javanicum 7626000 Fusarium sporotrichioides 75448000 Fusarium tricintum 75448000 Fusarium tricinctum 57877009 Fusarium verticillioides 34324005 Geotrichum 41625002 Geotrichum candidum 41625002 Oospora lactis 446493009 Geotrichum klebahnii 446493009 Geotrichum penicillatum 446493009 Trichosporon penicillatum 28920007 Gliocladium 21755009 Graphium 81951003 Histoplasma 56596006 Histoplasma capsulatum 243509006 Histoplasma capsulatum var capsulatum 37220005 Histoplasma duboisii 37220005 Histoplasma capsulatum var duboisii 116445006 Hormonema 116471005 Hormonema dermatoides 415932007 Kloeckera 78377004 Kluyveromyces 243430004 Kluyveromyces lactis 243431000 Kluyveromyces marxianus 243431000 Kluyveromyces fragilis 447042004 Kodamaea 447491002 Kodamaea ohmeri 447491002 Pichia ohmeri 78690001 Lasiodiplodia 78690001 Botryodiplodia 784008 Lasiodiplodia theobromae 784008 Botryodiplodia theobromae 17712004 Lecythophora 55153000 Lecythophora hoffmannii 55153000 Phialophora hoffmannii 38749003 Lecythophora mutabilis 38749003 Phialophera mutabilis 42797005 Leptosphaeria 48529007 Leptosphaeria senegalensis 80279006 Leptosphaeria tompkinsii 90959007 Loboa 23009007 Madurella 82871006 Madurella grisea 24876009 Madurella mycetomatis 24876009 Madurella mycetomi 18097004 Malassezia 18097004 Pityrosporum 29619007 Malassezia furfur 29619007 Pityrosporum furfur 29619007 Pityrosporum orbiculare 29619007 Malassezia ovale 29619007 Pityrosporum ovale 707291006 Malassezia globosa 51257000 Malassezia pachydermatis 51257000 Pityrosporum canis 51257000 Pityrosporum pachydermatis 10171000087105 Malassezia restricta 447178007 Malassezia sympodialis 87186007 Malbranchea 116443004 Metarhizium 116446007 Metarhizium anisopliae 11983001 Microsporum 61016004 Mortierella 63197001 Mortierella wolfii 49782006 Mucor 67625003 Mucor circinelloides 67625003 Mucor janssenii 67625003 Mucor javanicus 243423005 Mucor hiemalis 29589005 Mucor racemosus 79297004 Mucor ramosissimus 243425003 Mucor rouxians 718505003 Meyerozyma 29812000 Meyerozyma guilliermondii 29812000 Pichia guilliermondii 715363007 Neoscytalidium dimidiatum 715363007 Fusicoccum dimidiatum 715363007 Scytalidium dimidiatum 715363007 Torula dimidiata 41278006 Nigrospora 116450000 Ochroconis 116451001 Ochroconis constricta 116451001 Dactylaria constricta 116451001 Scolecobasidium constrictum 116453003 Ochroconis gallopava 116453003 Ochroconis gallopavum 116453003 Dactylaria constricta var gallopava 707829005 Ogataea 707830000 Ogataea polymorpha 707830000 Hansenula polymorpha 26001000 Paecilomyces 51306001 Paecilomyces javanicus 243514005 Paecilomyces lilacinus 243514005 Penicillium lilacinum 88336005 Paecilomyces marquandii 20035009 Paecilomyces variotii 112405000 Paracoccidioides 61449004 Paracoccidioides brasiliensis 61449004 Blastomyces brasiliensis 42993004 Penicillium 24406000 Penicillium chrysogenum 48370005 Penicillium citrinum 67330005 Penicillium commune 415947003 Penicillium decumbens 28266005 Penicillium expansum 75778008 Penicillium griseofulvum 75778008 Penicillium patulum 71825007 Penicillium marneffei 71825007 Talaromyces marneffei 54269009 Penicillium puberulum 52308002 Penicillium purpurogenum 52308002 Talaromyces ruber 39115007 Penicillium spinulosum 82397008 Penicillium verruculosum 34886002 Penicillium viridicatum 415948008 Phaeoacremonium 415950000 Phaeoacremonium parasiticum 243541000 Phaeoannellomyces 86327004 Phaeococcomyces 51929003 Phaeococcomyces exophialae 84481003 Phialemonium 80571005 Phialemonium curvatum 419272001 Phialemonium dimorphosporum 4074005 Phialemonium obovatum 41402008 Phialophora 145164301000087108 Phialophora americana 346778401000087108 Phialophora europaea 67301003 Phialophora verrucosa 61019006 Phoma 4163004 Pichia 4163004 Nakazawaea 427041001 Pichia anomala 427041001 Hansenula anomala 449402006 Pichia angusta 449402006 Ogataea angusta 449402006 Hansenula angusta 243433002 Pichia farinosa 50411008 Piedraia 89782007 Piedraia hortae 12760009 Pithomyces 698238004 Pleurostomophora 698239007 Pleurostomophora richardsiae 698239007 Phialophora richardsiae 115987006 Pneumocystis 699877004 Pneumocystis carinii 79909001 Pneumocystis jirovecii 37563009 Prototheca 70523003 Prototheca wickerhamii 32768009 Prototheca zopfii 54930009 Pseudallescheria 54930009 Pseudoallescheria 91088000 Pseudallescheria boydii 91088000 Petriellidium boydii 91088000 Allescheria boydii 91088000 Pseudoallescheria boydii 91088000 Petriellidum boydii 91088000 Acladium castellani 415958007 Pseudozyma 415959004 Pseudozyma aphidids 33478003 Pyrenochaeta 79274002 Pyrenochaeta romeroi 21690009 Rhinocladiella 45462000 Rhinocladiella aquaspersa 45462000 Ramichloridium cerophilum 45462000 Acrotheca aquaspersa 243545009 Rhinocladiella atrovirens 85711000 Rhizomucor 61389009 Rhizomucor miehei 70399006 Rhizomucor pusillus 70399006 Mucor pusillus 17683005 Rhizopus 87002009 Rhizopus arrhizus 87002009 Rhizopus oryzae 14504004 Rhizopus microsporus 37060000 Rhizopus stolonifer 37060000 Rhizopus nigricans 51976007 Rhodotorula 69250004 Rhodotorula glutinis 416777007 Rhodotorula minuta 243470006 Rhodotorula pilimanae 86724009 Rhodotorula rubra 86724009 Rhodotorula mucilaginosa 27069008 Saccharomyces 58296003 Saccharomyces cerevisiae 71259001 Saksenaea 58478009 Saksenaea vasiformis 8091000146106 Saprochaete 243546005 Sarcinosporon 243547001 Sarcinosporon inkin 243547001 Trichosporon inkin 243547001 Prototheca filamenta 243547001 Sarcinomyces inkin 243547001 Microsporum brachytomum 243547001 Fissuricella filamenta 31901009 Scedosporium 26861000146102 Scedosporium apiospermum 26861000146102 Monosporium apiospermum 26861000146102 Aleurisma apiospermum 24305000 Scedosporium boydii 24305000 Acladium castellanii 69564000 Scedosporium inflatum 69564000 Scedosporium prolificans 243444005 Schizophyllum 243445006 Schizophyllum commune 713330003 Schwanniomyces 717238009 Schwanniomyces polymorphus 717238009 Pichia polymorpha 717238009 Debaryomyces polymorphus 14462004 Scolecobasidium 47560005 Scolecobasidium humicola 47560005 Ochroconis humicola 39949000 Scopulariopsis 59520005 Scopulariopsis acremonium 3245004 Scopulariopsis brevicaulis 243523008 Scopulariopsis brumptii 243524002 Scopulariopsis candida 12678008 Scytalidium 6430000 Scytalidium hyalinum 17046009 Sepedonium 112398006 Sporobolomyces 243481009 Sporobolomyces roseus 243446007 Sporobolomyces salmonicolor 415961008 Sporopachydermia 63100009 Sporothrix 20302006 Sporothrix cyanescens 32662000 Sporothrix schenkii 32662000 Sporotrichum schenckii 32662000 Sporotrichum beurmannii 32662000 Sporothrix schenckii 32662000 Sporotrichum schenkii 415963006 Sporotrichum 415964000 Sporotrichum pruinosum 61175005 Stachybotrys 418469000 Stachybotrys chartarum 90824006 Stemphylium 415965004 Stephanoascus 415966003 Stephanoascus ciferrii 62678005 Syncephalastrum 243426002 Syncephalastrum racemosum 724054008 Talaromyces 724055009 Talaromyces ruber 724055009 Penicillium rubrum 83597000 Trichoderma 61143007 Trichoderma viride 88578003 Trichophyton 62289009 Trichosporon 243475001 Trichosporon asahii 39268007 Trichosporon beigelii 39268007 Trichosporon cutaneum 39268007 Trichosporon giganteum 415972003 Trichosporon loubieri 243478004 Trichosporon mucoides 415973008 Trichosporon mycotoxinivorans 243479007 Trichosporon ovoides 25783003 Trichosporon pullulans 70034005 Trichothecium 65789000 Ulocladium 49086004 Ustilago 50734003 Verticillium 70200002 Wangiella 20586007 Wangiella dermatitidis 20586007 Phialophora dermatitidis 20586007 Hormiscium dermatitidis 20586007 Hormodendrum dermatitidis 20586007 Exophiala dermatitidis 20586007 Fonsecaea dermatitidis 23496000 Fungus 23496000 Mycete 62093005 Yeast 84489001 Mold 416226001 Dimorphic fungi 74871001 Human adenovirus 58234003 Arenavirus 424055004 Astroviridae 83397001 BK Polyomavirus 83397001 Human polyomavirus BK 430902006 Bocavirus 243615000 Bunyaviridae 243627002 Calicivirus 64979004 California encephalitis virus 2423009 Chikungunya virus 34212000 Colorado tick fever virus 84101006 Human coronavirus 57757007 Human coxsackievirus 53744000 Human coxsackievirus A 49018005 Human coxsackievirus B 79875007 Crimean-Congo hemorrhagic fever virus 243579005 Human cytomegalovirus 5 243579005 Human (beta) herpes virus 5 243579005 Salivary gland virus 34348001 Dengue virus 243601002 Eastern equine encephalitis virus 424206003 Ebolavirus 39164004 Human echovirus 243633006 Enterovirus 28375005 Flavivirus 28375005 Arbovirus group B 32452004 Hepatitis A virus 32452004 Enterovirus type 72 81665004 Hepatitis B virus 62944002 Hepatitis C virus 83617006 Hepatitis D virus 83617006 Delta hepatitis viral agent 78475006 Hepatitis E virus 397582004 Hepatitis G virus 128377001 Herpesviridae 19965007 Human herpes simplex virus 19965007 Herpesvirus 15302007 Human herpes simplex virus type 1 13687007 Human herpes simplex virus type 2 19551004 Human herpesvirus 3 19551004 Varicella-zoster virus 40168006 Human herpesvirus 4 40168006 Epstein-Barr virus 103528003 Human Herpesvirus 6 427605002 Human Herpesvirus 8 89293008 Human immunodeficiency virus type I 36115006 Human immunodeficiency virus type 2 416730002 Human metapneumovirus 44172002 Human poliovirus 6415009 Human respiratory syncytial virus 77457007 Human T-lymphotropic virus 1 30417003 Human T-lymphotropic virus 2 725894000 Influenza virus 407479009 Influenza A virus 442352004 Influenza A virus subtype H1N1 442352004 Influenza A (H1N1) virus 420362005 Influenzavirus type A, avian, H1N1 strain 420362005 Avian Influenza A H1N1 Virus 407480007 Influenza B virus 407482004 Influenza C virus 36319009 JC virus 85944001 Lassa virus 82518003 Lymphocytic choriomeningitis virus 424421007 Marburgvirus 38350001 Mastadenovirus 52584002 Measles virus 52584002 Rubeola virus 52584002 Edmonston virus 68855006 Molluscum contagiosum virus 59774002 Monkeypox virus 83313003 Morbillivirus 50384007 Mumps virus 407359000 Norovirus 10514003 Norwalk virus 44725007 Orbivirus 64753004 Orf virus 64753004 Contagious pustular dermatitis virus 64753004 Pustular dermatitis virus 64753004 Contagious ecthyma virus 243591001 Orthoreovirus 243591001 Reovirus group 9482002 Human papillomavirus 407498006 Human parainfluenza viruses 63603005 B19 virus 63603005 Human parvovirus B19 63603005 Fifth disease virus 63603005 Erythrovirus B19 63603005 Erythema infectiosum virus 11970002 Parvovirus 407344006 Picornavirus group 407456008 Polyomavirus 424976006 Poxviridae 59881000 Rabies virus 407487005 Respirovirus 407327007 Rhabdovirus 1838001 Human rhinovirus 28335002 Rift Valley fever virus 417542000 Rotavirus 5210005 Rubella virus 5210005 German measles virus 45156000 Rubivirus 38244009 Simian Virus 40 58432001 St Louis encephalitis virus 69683003 Tanapox virus 129231002 Togavirus 32323003 Tick-borne encephalitis virus 13126002 Vaccinia virus 80298008 Varicellovirus 80298008 Varicellavirus 243568000 Variola virus 243568000 Smallpox virus 62958000 Venezuelan equine encephalomyelitis virus 62958000 Venezuelan equine encephalitis virus 57311007 West Nile virus 11428003 Western equine encephalomyelitis virus 11428003 Western equine encephalitis virus 445325002 Xenotropic murine leukemia virus-related virus 26630006 Yellow fever virus 50471002 Zika virus 49872002 Virus 50875003 Acanthamoeba 17113000 Ancylostoma 7153002 Angiostrongylus 66953006 Ascaris 66953006 Eelworm 35029001 Babesia 35029001 Nuttallia 76828008 Babesia microti 14479005 Balantidium 72548008 Chilomastix 41340007 Chilomastix mesnili 83821001 Cryptosporidium 417722006 Cryptosporidium hominis 51504002 Cryptosporidium parvum 103560006 Cyclospora 103561005 Cyclospora cayetanensis 78167007 Cysticercus 29334008 Dientamoeba 41542000 Dientamoeba fragilis 48262003 Diphyllobothrium 48262003 Dibothriocephalus 21041005 Dipylidium 47622006 Echinococcus 75866001 Endolimax 53272006 Endolimax nana 38324000 Entamoeba 79235009 Entamoeba coli 415987008 Entamoeba dispar 44457009 Entamoeba gingivalis 70632005 Entamoeba hartmanni 4716008 Entamoeba histolytica 363769000 Entamoeba histolytica/dispar 66223005 Entamoeba polecki 88569009 Enterobius 58815006 Enteromonas 78006004 Enteromonas hominis 61419001 Giardia 78181009 Giardia lamblia 78181009 Giardia intestinalis 78181009 Giardia duodenalis 112412009 Hartmannella 13029007 Heterophyes 15310008 Heterophyes heterophyes 76403008 Hymenolepis 26704001 Isospora 79357004 Leishmania 243662007 Microsporidium 18441007 Naegleria 46112007 Necator 84936006 Pediculus humanus 84936006 Body lice 34706006 Plasmodium 30020004 Plasmodium falciparum 49918008 Plasmodium knowlesi 56395006 Plasmodium malariae 18508006 Plasmodium ovale 74746009 Plasmodium vivax 65470001 Rhinosporidium 34666003 Sarcocystis 17696006 Sarcocystis hominis 71131007 Sarcocystis lindemanni 35193008 Sarcocystis suihominis 67333007 Sarcoptes scabiei 67333007 Scabies mite 10823008 Strongyloides 28625000 Taenia 28625000 Hydatigera 39091000 Toxocara 61949005 Toxoplasma 4649006 Toxoplasma gondii 37900004 Trichinella 3764006 Trichomonas 20065004 Trichostrongylus 2572000 Trichuris 40740003 Trypanosoma 243659009 Trypanosoma brucei 79513002 Trypanosoma brucei rhodesiense 88274000 Trypanosoma cruzi 88274000 Trypanosoma triatomae 88274000 Trypanosoma escomelis 72637009 Trypanosoma rangeli 103535006 Parasite 417396000 Protozoan 88520007 Creutzfeldt-Jakob agent 88520007 Creutzfeldt-Jakob disease agent
Expansion
This value set has >1000 codes in it. In order to keep the publication size manageable, only a selection (1000 codes) of the whole set of codes is shown
All codes from system http://snomed.info/sct
| Code | Display | Definition |
| 115161005 | Abiotrophia | |
| 113714003 | Abiotrophia defectiva | |
| 113714003 | Streptococcus defectivus | |
| 84858009 | Acholeplasma | |
| 84858009 | Sapromyces | |
| 89082003 | Acholeplasma laidlawii | |
| 89082003 | Asterococcus laidlawii | |
| 89082003 | Mycoplasma laidlawii | |
| 89082003 | Sapromyces laidlawii | |
| 86450009 | Acholeplasma oculi | |
| 91620006 | Achromobacter | |
| 413414001 | Achromobacter denitrificans | |
| 413414001 | Achromobacter xylosoxidans denitrificans | |
| 413414001 | Alcaligenes xylosoxidans denitrificans | |
| 413420000 | Achromobacter piechaudii | |
| 413421001 | Achromobacter ruhlandii | |
| 413424009 | Achromobacter xylosoxidans | |
| 413424009 | Alcaligenes xylosoxidans | |
| 707330008 | multidrug resistant Achromobacter xylosoxidans | |
| 423897003 | Achromobacter xylosoxidans xylosoxidans | |
| 59995003 | Achromobacter, group Vd biotype 1 | |
| 55156008 | Achromobacter, group Vd biotype 2 | |
| 28207003 | Acidaminococcus | |
| 63005002 | Acidaminococcus fermentans | |
| 115153000 | Acidovorax | |
| 113685003 | Acidovorax delafieldii | |
| 113685003 | Pseudomonas delafieldii | |
| 113686002 | Acidovorax facilis | |
| 113686002 | Pseudomonas facilis | |
| 113687006 | Acidovorax temperans | |
| 7757008 | Acinetobacter | |
| 446157004 | multidrug resistant Acinetobacter | |
| 445721008 | carbapenem resistant Acinetobacter | |
| 91288006 | Acinetobacter baumannii | |
| 82550008 | Acinetobacter calcoaceticus | |
| 82550008 | Herellea vaginicola | |
| 82550008 | Acinetobacter anitratus | |
| 82550008 | Acinetobacter calcoaceticus anitratus | |
| 82550008 | Bacterium anitratum | |
| 113376007 | Acinetobacter calcoaceticus-baumannii complex | |
| 113377003 | Acinetobacter genospecies 3 | |
| 77045006 | Acinetobacter haemolyticus | |
| 77045006 | Acinetobacter hemolyticus | |
| 252000 | Acinetobacter johnsonii | |
| 13879009 | Acinetobacter junii | |
| 83088009 | Acinetobacter lwoffi | |
| 83088009 | Acinetobacter calcoaceticus lwoffi | |
| 83088009 | Acinetobacter lwoffii | |
| 83088009 | Acinetobacter calcoaceticus lwoffii | |
| 83088009 | Mima polymorpha | |
| 113381003 | Acinetobacter radioresistens | |
| 113381003 | Acinetobacter radioresistans | |
| 423732001 | Acinetobacter schindleri | |
| 424791004 | Acinetobacter ursingii | |
| 85851009 | Actinobacillus | |
| 27165004 | Actinobacillus equuli | |
| 43638004 | Actinobacillus hominis | |
| 78043002 | Actinobacillus lignieresii | |
| 112272003 | Actinobacillus suis | |
| 1839009 | Actinobacillus ureae | |
| 1839009 | Pasteurella ureae | |
| 114043007 | Actinobaculum | |
| 416353004 | Actinobaculum massiliense | |
| 416353004 | Actinobaculum massiliae | |
| 114044001 | Actinobaculum schaalii | |
| 427148009 | Actinobaculum urinale | |
| 41571004 | Actinomadura | |
| 113402007 | Actinomadura latina | |
| 90285002 | Actinomadura madurae | |
| 90285002 | Nocardia madurae | |
| 65202006 | Actinomadura pelletieri | |
| 40560008 | Actinomyces | |
| 59806008 | Actinomyces bovis | |
| 427237005 | Actinomyces cardiffensis | |
| 426330001 | Actinomyces dentalis | |
| 113414004 | Actinomyces europaeus | |
| 419012004 | Actinomyces funkei | |
| 113415003 | Actinomyces georgiae | |
| 113415003 | Actinomyces DO8 | |
| 113416002 | Actinomyces gerencseriae | |
| 113416002 | Actinomyces israelii serotype II | |
| 113416002 | Actinomyces gerenseriae | |
| 113417006 | Actinomyces graevenitzii | |
| 427269001 | Actinomyces hongkongensis | |
| 46369004 | Actinomyces israelii | |
| 46369004 | Actinomycosis israelii | |
| 3174002 | Actinomyces meyeri | |
| 3174002 | Actinobacterium meyeri | |
| 8940004 | Actinomyces naeslundii | |
| 425520001 | Actinomyces nasicola | |
| 8.7780299100008704E+17 | Actinomyces neuii | |
| 12069003 | Actinomyces odontolyticus | |
| 425488009 | Actinomyces oricola | |
| 447175005 | Actinomyces oris | |
| 427691003 | Actinomyces radicidentis | |
| 113421004 | Actinomyces radingae | |
| 113422006 | Actinomyces turicensis | |
| 409827009 | Actinomyces urogenitalis | |
| 33529006 | Actinomyces viscosus | |
| 9008009 | Aerococcus | |
| 409818008 | Aerococcus christensenii | |
| 131205009 | Aerococcus sanguicola | |
| 427222006 | Aerococcus sanguinicola | |
| 243230001 | Aerococcus urinae | |
| 430979003 | Aerococcus urinaeequi | |
| 430979003 | Pediococcus urinaeequi | |
| 409819000 | Aerococcus urinaehominis | |
| 78803006 | Aerococcus viridans | |
| 88529008 | Aeromonas | |
| 115027006 | Aeromonas bestiarum | |
| 115036005 | Aeromonas caviae | |
| 115036005 | Aeromonas punctata | |
| 115036005 | Aeromonas hydrophila anaerogenes | |
| 429561000124107 | Aeromonas caviae complex | |
| 115028001 | Aeromonas encheleia | |
| 115030004 | Aeromonas eucrenophilia | |
| 115030004 | Aeromonas eucrenophila | |
| 85823000 | Aeromonas hydrophila | |
| 85823000 | Pseudomonas hydrophila | |
| 429581000124102 | Aeromonas hydrophila complex | |
| 115034008 | Aeromonas jandei | |
| 115034008 | Aeromonas jandaei | |
| 65192005 | Aeromonas media | |
| 425862003 | Aeromonas molluscorum | |
| 115035009 | Aeromonas popoffii | |
| 30334005 | Aeromonas salmonicida | |
| 64537004 | Aeromonas salmonicida achromogenes | |
| 51768004 | Aeromonas salmonicida masoucida | |
| 416266002 | Aeromonas salmonicida pectinolytica | |
| 62520007 | Aeromonas salmonicida salmonicida | |
| 243315007 | Aeromonas salmonicida smithia | |
| 115039003 | Aeromonas schubertii | |
| 426333004 | Aeromonas simiae | |
| 43731003 | Aeromonas sobria | |
| 243316008 | Aeromonas trota | |
| 243316008 | Aeromonas enteropelogenes | |
| 243316008 | Aeromonas tructi | |
| 9281006 | Aeromonas veronii | |
| 243317004 | Aeromonas veronii sobria | |
| 243318009 | Aeromonas veronii veronii | |
| 114234007 | Afipia | |
| 114236009 | Afipia clevelandensis | |
| 114237000 | Afipia felis | |
| 441718002 | Aggregatibacter | |
| 442680008 | Aggregatibacter actinomycetemcomitans | |
| 442680008 | Actinobacillus actinomycetemcomitans | |
| 442680008 | Haemophilus actinomycetemcomitans | |
| 442683005 | Aggregatibacter aphrophilus | |
| 442683005 | Haemophilus aphrophilus | |
| 442651004 | Aggregatibacter segnis | |
| 442651004 | Haemophilus segnis | |
| 33436009 | Agrobacterium | |
| 427200004 | Agromyces | |
| 68571003 | Alcaligenes | |
| 25223004 | Alcaligenes faecalis | |
| 25223004 | Alcaligenes odorans | |
| 25223004 | Pseudomonas odorans | |
| 58251005 | Alcaligenes piechaudii | |
| 53735001 | Alcaligenes xylosoxidans xylosoxidans | |
| 416056000 | Alishewanella | |
| 417165004 | Alishewanella fetalis | |
| 427315001 | Alistipes | |
| 426435007 | Alistipes putredinis | |
| 426435007 | Bacteroides putredinis | |
| 396453006 | Alloiococcus | |
| 396454000 | Alloiococcus otitis | |
| 429601004 | Alloscardovia | |
| 429317001 | Alloscardovia omnicolens | |
| 55181006 | Alysiella | |
| 444924000 | Alysiella crassa | |
| 444924000 | Simonsiella crassa | |
| 115149002 | Amycolatopsis | |
| 427705005 | Amycolatopsis orientalis | |
| 427705005 | Nocardia orientalis | |
| 55757006 | Anaerobiospirillum | |
| 46934005 | Anaerobiospirillum succinoproducens | |
| 46934005 | Anaerobiospirillum succiniciproducens | |
| 426729008 | Anaerobiospirillum thomasii | |
| 413518000 | Anaerococcus | |
| 413519008 | Anaerococcus hydrogenalis | |
| 413519008 | Peptostreptococcus hydrogenalis | |
| 413520002 | Anaerococcus lactolyticus | |
| 413520002 | Peptostreptococcus lactolyticus | |
| 413521003 | Anaerococcus octavius | |
| 413521003 | Peptostreptococcus octavius | |
| 413522005 | Anaerococcus prevotii | |
| 413522005 | Peptostreptococcus prevotii | |
| 427220003 | Anaerococcus tetradius | |
| 413524006 | Anaerococcus tretradius | |
| 413524006 | Peptostreptococcus tetradius | |
| 413525007 | Anaerococcus vaginalis | |
| 413525007 | Peptostreptococcus vaginalis | |
| 54522000 | Anaerorhabdus | |
| 24716009 | Anaerorhabdus furcosus | |
| 24716009 | Bacteroides furcosus | |
| 3351007 | Anaplasma | |
| 114125006 | Aneurinibacillus | |
| 114126007 | Aneurinibacillus aneurinilyticus | |
| 114126007 | Bacillus aneurinolyticus | |
| 51714009 | Arcanobacterium | |
| 44723000 | Arcanobacterium haemolyticum | |
| 44723000 | Corynebacterium hemolyticum | |
| 428939003 | Arcanobacterium pluranimalium | |
| 114206000 | Arcobacter | |
| 114207009 | Arcobacter butzleri | |
| 114207009 | Campylobacter butzleri | |
| 408629003 | Arcobacter nitrofigilis | |
| 408629003 | Campylobacter nitrofigilis | |
| 56214009 | Arthrobacter | |
| 113432004 | Arthrobacter agilis | |
| 127496003 | Arthrobacter albus | |
| 428949000 | Arthrobacter arilaitensis | |
| 113433009 | Arthrobacter astrocyaneus | |
| 113434003 | Arthrobacter aurescens | |
| 428950000 | Arthrobacter bergerei | |
| 428038008 | Arthrobacter chlorophenolicus | |
| 44955005 | Arthrobacter citreus | |
| 417608004 | Arthrobacter creatinolyticus | |
| 113435002 | Arthrobacter crystallopoietes | |
| 113436001 | Arthrobacter cumminsii | |
| 429762004 | Arthrobacter flavus | |
| 428332000 | Arthrobacter gandavensis | |
| 429237000 | Arthrobacter gangotriensis | |
| 3840003 | Arthrobacter globiformis | |
| 113437005 | Arthrobacter histidinolovorans | |
| 48276002 | Arthrobacter ilicis | |
| 429238005 | Arthrobacter kerguelensis | |
| 427847001 | Arthrobacter koreensis | |
| 127497007 | Arthrobacter luteolus | |
| 428270003 | Arthrobacter methylotrophus | |
| 113438000 | Arthrobacter mysorens | |
| 428337006 | Arthrobacter nasiphocae | |
| 113439008 | Arthrobacter nicotianae | |
| 113440005 | Arthrobacter nicotinovorans | |
| 429001000 | Arthrobacter nitroguajacolicus | |
| 446485009 | Arthrobacter oryzae | |
| 113441009 | Arthrobacter oxydans | |
| 113442002 | Arthrobacter pascens | |
| 113443007 | Arthrobacter polychromogenes | |
| 62636004 | Arthrobacter protophormiae | |
| 428338001 | Arthrobacter psychrolactophilus | |
| 428048005 | Arthrobacter psychrophenolicus | |
| 113444001 | Arthrobacter ramosus | |
| 428277000 | Arthrobacter rhombi | |
| 429003002 | Arthrobacter roseus | |
| 428049002 | Arthrobacter russicus | |
| 704978005 | Arthrobacter scleromae | |
| 429111005 | Arthrobacter sulfonivorans | |
| 33287009 | Arthrobacter sulfureus | |
| 112273008 | Arthrobacter uratoxydans | |
| 113446004 | Arthrobacter ureafaciens | |
| 113447008 | Arthrobacter viscosus | |
| 113448003 | Arthrobacter woluwensis | |
| 115136007 | Atopobium | |
| 428580003 | Atopobium fossor | |
| 428580003 | Eubacterium fossor | |
| 113630002 | Atopobium minutum | |
| 113630002 | Lactobacillus minutus | |
| 113631003 | Atopobium parvulum | |
| 113631003 | Peptostreptococcus parvulus | |
| 113631003 | Streptococcus parvulus | |
| 113632005 | Atopobium rimae | |
| 113632005 | Lactobacillus rimae | |
| 417246003 | Atopobium vaginae | |
| 708491006 | Aureimonas | |
| 421099007 | Averyella | |
| 429076006 | Avibacterium gallinarum | |
| 429076006 | Pasteurella gallinarum | |
| 413607005 | Azospirillum | |
| 413609008 | Azospirillum brasilense | |
| 44762009 | Bacillus | |
| 413352001 | Bacillus, not B. anthracis | |
| 428272006 | Bacillus aeolius | |
| 446486005 | Bacillus aerius | |
| 429112003 | Bacillus agaradhaerens | |
| 90547001 | Bacillus alcalophilus | |
| 428278005 | Bacillus algicola | |
| 82289003 | Bacillus amyloliquefaciens | |
| 21927003 | Bacillus anthracis | |
| 423188000 | Bacillus aquimaris | |
| 429004008 | Bacillus arseniciselenatis | |
| 429115001 | Bacillus asahii | |
| 113450006 | Bacillus atrophaeus | |
| 72997009 | Bacillus azotoformans | |
| 33457001 | Bacillus badius | |
| 429638004 | Bacillus barbaricus | |
| 429246006 | Bacillus bataviensis | |
| 39232002 | Bacillus benzoevorans | |
| 427831003 | Bacillus boroniphilus | |
| 447039005 | Bacillus butanolivorans | |
| 113451005 | Bacillus carboniphilus | |
| 84408007 | Bacillus cereus | |
| 413618005 | Bacillus cereus group | |
| 113452003 | Bacillus chittonlyticus | |
| 71812004 | Bacillus circulans | |
| 413619002 | Bacillus circulans group | |
| 113453008 | Bacillus clarkii | |
| 113454002 | Bacillus clausii | |
| 81346002 | Bacillus coagulans | |
| 113455001 | Bacillus cohnii | |
| 445081000 | Bacillus decisifrondis | |
| 429116000 | Bacillus decolorationis | |
| 113456000 | Bacillus dipsosauri | |
| 428129008 | Bacillus drentensis | |
| 113457009 | Bacillus ehimensis | |
| 429137008 | Bacillus endophyticus | |
| 429348009 | Bacillus farraginis | |
| 35784003 | Bacillus fastidiosus | |
| 13430008 | Bacillus firmus | |
| 113458004 | Bacillus flexus | |
| 417062004 | Bacillus fordii | |
| 427859002 | Bacillus fortis | |
| 429118004 | Bacillus fumarioli | |
| 428387004 | Bacillus funiculus | |
| 427864003 | Bacillus galactosidilyticus | |
| 429034003 | Bacillus gelatini | |
| 113460002 | Bacillus gibsonii | |
| 445082007 | Bacillus ginsengi | |
| 29100001 | Bacillus gornadae | |
| 113462005 | Bacillus halmapalus | |
| 113464006 | Bacillus halodenitrificans | |
| 113465007 | Bacillus halodurans | |
| 113467004 | Bacillus horikoshii | |
| 429138003 | Bacillus horti | |
| 429139006 | Bacillus humi | |
| 429035002 | Bacillus hwajinpoensis | |
| 447040007 | Bacillus idriensis | |
| 429145003 | Bacillus indicus | |
| 432698009 | Bacillus infantis | |
| 113468009 | Bacillus infernus | |
| 54382003 | Bacillus insolitus | |
| 429127003 | Bacillus jeotgali | |
| 113469001 | Bacillus kaustophilus | |
| 447041006 | Bacillus korlensis | |
| 429126007 | Bacillus krulwichiae | |
| 3020006 | Bacillus lentus | |
| 74867004 | Bacillus licheniformis | |
| 429675009 | Bacillus luciferensis | |
| 413620008 | Bacillus macroides | |
| 429206000 | Bacillus macyae | |
| 87850009 | Bacillus marinus | |
| 87850009 | Bacillus globisporus marinus | |
| 424425003 | Bacillus marisflavi | |
| 445083002 | Bacillus massiliensis | |
| 79109002 | Bacillus megaterium | |
| 113471001 | Bacillus methanolicus | |
| 113472008 | Bacillus mojavensis | |
| 429210002 | Bacillus mucilaginosus | |
| 428576008 | Bacillus muralis | |
| 33900003 | Bacillus mycoides | |
| 113473003 | Bacillus naganoensis | |
| 428577004 | Bacillus nealsonii | |
| 429747001 | Bacillus niacini | |
| 429212005 | Bacillus novalis | |
| 428958007 | Bacillus odysseyi | |
| 429468004 | Bacillus okuhidensis | |
| 113487003 | Bacillus oleronius | |
| 84897001 | Bacillus pallidus | |
| 43131009 | Bacillus pasteurii | |
| 428962001 | Bacillus patagoniensis | |
| 442283002 | Bacillus pocheonensis | |
| 113474009 | Bacillus pseudalcaliphilus | |
| 113475005 | Bacillus pseudofirmus | |
| 429077002 | Bacillus pseudomycoides | |
| 429078007 | Bacillus psychrodurans | |
| 1810009 | Bacillus psychrophilus | |
| 113476006 | Bacillus psychrosaccharolyticus | |
| 112274002 | Bacillus pulvifaciens | |
| 16580009 | Bacillus pumilus | |
| 113478007 | Bacillus salexigens | |
| 428588005 | Bacillus saliphilus | |
| 428966003 | Bacillus selenitireducens | |
| 429221006 | Bacillus shackletonii | |
| 113479004 | Bacillus simplex | |
| 428972003 | Bacillus siralis | |
| 84789000 | Bacillus smithii | |
| 428973008 | Bacillus soli | |
| 429472000 | Bacillus sonorensis | |
| 70313006 | Bacillus sphaericus | |
| 113480001 | Bacillus sporothermodurans | |
| 25484005 | Bacillus stearothermophilus | |
| 429486001 | Bacillus subterraneus | |
| 83512007 | Bacillus subtilis | |
| 413621007 | Bacillus subtilis group | |
| 427760003 | Bacillus subtilis spizizenii | |
| 447068006 | Bacillus subtilis inaquosorum | |
| 427764007 | Bacillus subtilis subtilis | |
| 447069003 | Bacillus tequilensis | |
| 429760007 | Bacillus thermantarcticus | |
| 113481002 | Bacillus thermoamylovorans | |
| 113482009 | Bacillus thermocatenulatus | |
| 113483004 | Bacillus thermocloacae | |
| 36302007 | Bacillus thermoglucosidasius | |
| 64840009 | Bacillus thuringiensis | |
| 34498004 | Bacillus tusciae | |
| 113484005 | Bacillus vallismortis | |
| 113485006 | Bacillus vedderi | |
| 429488000 | Bacillus velezensis | |
| 429229008 | Bacillus vietnamensis | |
| 429230003 | Bacillus vireti | |
| 413622000 | Bacillus weihenstephanensis | |
| 57522007 | Bacteroides | |
| 14342006 | Bacteroides caccae | |
| 14342006 | Bacteroides fragilis group 3452A | |
| 86193002 | Bacteroides coagulans | |
| 90072006 | Bacteroides eggerthii | |
| 55247009 | Bacteroides fragilis | |
| 55247009 | Bacteroides fragilis fragilis | |
| 417375007 | Bacteroides fragilis group | |
| 708567004 | Bacteroides massiliensis | |
| 10091000087105 | Bacteroides nordii | |
| 86936008 | Bacteroides ovatus | |
| 86936008 | Bacteroides fragilis ovatus | |
| 50504006 | Bacteroides pyogenes | |
| 163009 | Bacteroides stercoris | |
| 163009 | Bacteroides fragilis a | |
| 85541000 | Bacteroides tectum | |
| 431145009 | Bacteroides tectus | |
| 34236001 | Bacteroides thetaiotaomicron | |
| 34236001 | Bacteroides fragilis thetaiotamicron | |
| 59604009 | Bacteroides uniformis | |
| 52798008 | Bacteroides vulgatus | |
| 52798008 | Bacteroides fragilis vulgatus | |
| 425729002 | Bacteroides zoogleoformans | |
| 425729002 | Prevotella zoogleoformans | |
| 416418007 | Balneatrix | |
| 416691007 | Balneatrix alpica | |
| 62496009 | Bartonella | |
| 62496009 | Rochalimaea | |
| 62496009 | Grahamella | |
| 62496009 | Rochalimea | |
| 243352007 | Bartonella bacilliformis | |
| 114223009 | Bartonella clarridgeiae | |
| 103513003 | Bartonella elizabethae | |
| 103513003 | Rochalimaea elizabethae | |
| 103510000 | Bartonella henselae | |
| 103510000 | Rochalimaea henselae | |
| 103511001 | Bartonella quintana | |
| 103511001 | Rochalimaea quintana | |
| 103511001 | Rickettsia quintana | |
| 103512008 | Bartonella vinsonii | |
| 103512008 | Rochalimaea vinsonii | |
| 417657001 | Bartonella vinsonii arupensis | |
| 114228000 | Bartonella vinsonii berkhoffii | |
| 115659000 | Bergeyella | |
| 113718000 | Bergeyella zoohelcum | |
| 113718000 | Weeksella zoohelcum | |
| 5912005 | Bifidobacterium | |
| 34446001 | Bifidobacterium adolescentis | |
| 33811005 | Bifidobacterium angulatum | |
| 27108000 | Bifidobacterium bifidum | |
| 35011006 | Bifidobacterium breve | |
| 11539003 | Bifidobacterium catenulatum | |
| 36623007 | Bifidobacterium dentium | |
| 36623007 | Bifidobacterium appendicitis | |
| 36623007 | Bifidobacterium ericksonii | |
| 51095003 | Bifidobacterium gallicum | |
| 35848003 | Bifidobacterium infantis | |
| 19464000 | Bifidobacterium longum | |
| 19464000 | Bifidobacterium suis | |
| 19333001 | Bifidobacterium pseudocatenulatum | |
| 385502004 | Bifidobacterium scardovii | |
| 114242008 | Bilophila | |
| 114243003 | Bilophila wadsworthia | |
| 448390002 | Blautia | |
| 449531007 | Blautia coccoides | |
| 449574005 | Blautia hansenii | |
| 449574005 | Streptococcus hansenii | |
| 449574005 | Ruminococcus hansenii | |
| 698205008 | Blautia producta | |
| 698205008 | Ruminococcus productus | |
| 698205008 | Peptostreptococcus productus | |
| 698205008 | Streptococcus productus | |
| 46466005 | Bordetella | |
| 43354005 | Bordetella avium | |
| 10620008 | Bordetella bronchiseptica | |
| 10620008 | Alcaligenes bronchisepticus | |
| 10620008 | CDC group EF26 | |
| 10620008 | CDC group IVa | |
| 113495004 | Bordetella hinzii | |
| 116035000 | Bordetella holmesii | |
| 116035000 | CDC Nonoxidizer group 2 | |
| 26183002 | Bordetella parapertussis | |
| 5247005 | Bordetella pertussis | |
| 5247005 | Hemophilus pertussis | |
| 416665006 | Bordetella petrii | |
| 113496003 | Bordetella trematum | |
| 112277009 | Borrelia | |
| 416551001 | Borrelia afzelii | |
| 58382007 | Borrelia anserina | |
| 76327009 | Borrelia burgdorferi | |
| 12544007 | Borrelia caucasica | |
| 43459001 | Borrelia coriaceae | |
| 35660000 | Borrelia crocidurae | |
| 39709002 | Borrelia duttonii | |
| 39709002 | Borrelia duttoni | |
| 113497007 | Borrelia garinii | |
| 62748005 | Borrelia hermsii | |
| 11787006 | Borrelia hispanica | |
| 113498002 | Borrelia japonica | |
| 113499005 | Borrelia lusitaniae | |
| 3293005 | Borrelia mazzottii | |
| 113500001 | Borrelia miyamotoi | |
| 41704008 | Borrelia parkeri | |
| 34726005 | Borrelia recurrentis | |
| 34726005 | Borrelia obermyeri | |
| 34726005 | Borrelia novyi | |
| 113501002 | Borrelia tanukii | |
| 89068003 | Borrelia theileri | |
| 24986006 | Borrelia turicatae | |
| 113503004 | Borrelia valaisiana | |
| 30765003 | Borrelia venezuelensis | |
| 11572003 | Brachyspira | |
| 48621001 | Brachyspira aalborgi | |
| 113517008 | Brachyspira pilosicoli | |
| 113517008 | Serpulina pilosicoli | |
| 114114002 | Brevibacillus | |
| 114115001 | Brevibacillus agri | |
| 114115001 | Bacillus agri | |
| 114115001 | Bacillus galactophilus | |
| 114117009 | Brevibacillus brevis | |
| 114117009 | Bacillus brevis | |
| 114118004 | Brevibacillus centrosporus | |
| 114118004 | Bacillus centrosporus | |
| 114121002 | Brevibacillus laterosporus | |
| 114121002 | Bacillus laterosporus | |
| 114122009 | Brevibacillus parabrevis | |
| 114122009 | Bacillus parabrevis | |
| 3603008 | Brevibacterium | |
| 6405003 | Brevibacterium casei | |
| 57301000 | Brevibacterium epidermidis | |
| 112278004 | Brevibacterium linens | |
| 409826000 | Brevibacterium luteolum | |
| 409826000 | Brevibacterium lutzens | |
| 431099002 | Brevibacterium mcbrellneri | |
| 431681006 | Brevibacterium sanguinis | |
| 115154006 | Brevundimonas | |
| 113689009 | Brevundimonas diminuta | |
| 113689009 | Pseudomonas diminuta | |
| 113690000 | Brevundimonas vesicularis | |
| 113690000 | Pseudomonas vesicularis | |
| 26250004 | Brucella | |
| 24224000 | Brucella abortus | |
| 24224000 | Brucella melitensis biovar abortus | |
| 24224000 | Bacillus abortus | |
| 38025008 | Brucella canis | |
| 38025008 | Brucella melitensis biovar canis | |
| 72829003 | Brucella melitensis | |
| 72829003 | Micrococcus melitensis | |
| 28461002 | Brucella neotomae | |
| 28461002 | Brucella melitensis biovar neotomae | |
| 35049005 | Brucella ovis | |
| 35049005 | Brucella melitensis biovar ovis | |
| 48317004 | Brucella suis | |
| 48317004 | Brucella melitensis biovar suis | |
| 55851000 | Budvicia | |
| 75464008 | Budvicia aquatica | |
| 413724008 | Bulleidia | |
| 413725009 | Bulleidia extructa | |
| 414324002 | Burkholderia | |
| 416467009 | Burkholderia ambifaria | |
| 417565005 | Burkholderia anthina | |
| 445778000 | Burkholderia arboris | |
| 416941006 | Burkholderia cenocepacia | |
| 113669008 | Burkholderia cepacia | |
| 113669008 | Pseudomonas cepacia | |
| 113669008 | Pseudomonas multivorans | |
| 131281002 | Burkholderia cepacia complex | |
| 698061006 | Burkholderia contaminans | |
| 700394003 | Burkholderia diffusa | |
| 431173006 | Burkholderia dolosa | |
| 113671008 | Burkholderia gladioli | |
| 113671008 | Pseudomonas alliicola | |
| 113671008 | Pseudomonas antimicrobica | |
| 113671008 | Pseudomonas cocovenenans | |
| 113671008 | Pseudomonas gladioli | |
| 113671008 | Burkholderia cocovenenans | |
| 442143003 | Burkholderia lata | |
| 700393009 | Burkholderia latens | |
| 113674000 | Burkholderia mallei | |
| 113674000 | Pseudomonas mallei | |
| 700392004 | Burkholderia metallica | |
| 113675004 | Burkholderia multivorans | |
| 116399000 | Burkholderia pseudomallei | |
| 116399000 | Actinobacillus pseudomallei | |
| 116399000 | Flavobacterium pseudomallei | |
| 116399000 | Malleomyces pseudomallei (OT) | |
| 116399000 | Pseudomonas pseudomallei | |
| 116399000 | Human Glanders bacillus | |
| 116399000 | Whitmore's bacillus | |
| 113677007 | Burkholderia pyrrocinia | |
| 113677007 | Pseudomonas pyrrocinia | |
| 416616001 | Burkholderia stabilis | |
| 113678002 | Burkholderia thailandensis | |
| 431686001 | Burkholderia ubonensis | |
| 113680008 | Burkholderia vietnamiensis | |
| 3451006 | Buttiauxella | |
| 10969007 | Buttiauxella agrestis | |
| 416844002 | Buttiauxella brennerae | |
| 417520001 | Buttiauxella ferragutiae | |
| 416852004 | Buttiauxella gaviniae | |
| 417035007 | Buttiauxella izardii | |
| 114261007 | Buttiauxella noackiae | |
| 416444007 | Buttiauxella warmboldiae | |
| 447185006 | Butyricimonas | |
| 447458006 | Butyricimonas virosa | |
| 20778009 | Butyrivibrio | |
| 22176007 | Butyrivibrio fibrisolvens | |
| 431168000 | Butyrivibrio hungatei | |
| 86702009 | Calymmatobacterium | |
| 35408001 | Campylobacter | |
| 40614002 | Campylobacter coli | |
| 40614002 | CDC group EF22 | |
| 9892000 | Campylobacter concisus | |
| 7858008 | Campylobacter cryaerophila | |
| 7858008 | Arcobacter cryaerophilus | |
| 116037008 | Campylobacter curvus | |
| 116037008 | Wolinella curva | |
| 84210007 | Campylobacter fetus | |
| 84210007 | Vibrio fetus | |
| 60817000 | Campylobacter fetus venerealis | |
| 64589009 | Campylobacter fetus fetus | |
| 113528007 | Campylobacter gracilis | |
| 113528007 | Bacteroides gracilis | |
| 113522008 | Campylobacter helveticus | |
| 416679003 | Campylobacter hominis | |
| 9041007 | Campylobacter hyointestinalis | |
| 432460004 | Campylobacter insulaenigrae | |
| 66543000 | Campylobacter jejuni | |
| 66543000 | Campylobacter fetus jejuni | |
| 113523003 | Campylobacter jejuni doylei | |
| 113524009 | Campylobacter jejuni jejuni | |
| 432537009 | Campylobacter lanienae | |
| 116386003 | Campylobacter lari | |
| 116386003 | Campylobacter laridis | |
| 87402003 | Campylobacter mucosalis | |
| 87402003 | Campylobacter sputorum mucosalis | |
| 113525005 | Campylobacter rectus | |
| 113525005 | Wolinella recta | |
| 113526006 | Campylobacter showae | |
| 91524009 | Campylobacter sputorum | |
| 91524009 | Vibrio sputorum | |
| 19552006 | Campylobacter sputorum bubulus | |
| 58928003 | Campylobacter sputorum sputorum | |
| 103427005 | Campylobacter upsaliensis | |
| 450602004 | Campylobacter ureolyticus | |
| 450602004 | Bacteroides ureolyticus | |
| 22294008 | Capnocytophaga | |
| 113529004 | Capnocytophaga canimorsus | |
| 113529004 | CDC group DF-2 | |
| 113530009 | Capnocytophaga cynodegmi | |
| 113530009 | CDC group DF-2-like | |
| 66463009 | Capnocytophaga gingivalis | |
| 113531008 | Capnocytophaga granulosa | |
| 113532001 | Capnocytophaga hemolytica | |
| 4256006 | Capnocytophaga ochracea | |
| 4256006 | Bacteroides ochraceus | |
| 4256006 | CDC group DF-1 | |
| 89892005 | Capnocytophaga sputigena | |
| 22292007 | Cardiobacterium | |
| 7333005 | Cardiobacterium hominis | |
| 428148007 | Cardiobacterium valvarum | |
| 417391005 | Catenibacterium | |
| 416305003 | Catenibacterium mitsuokai | |
| 363774008 | Catonella | |
| 363775009 | Catonella morbi | |
| 413793007 | CDC Enteric Group 58 | |
| 116403009 | EF-4 | |
| 116405002 | CDC group EF-4b | |
| 127534000 | CDC group IVc-2 | |
| 413797008 | CDC Group Vb-3 | |
| 413797008 | Pseudomonas stutzeri-like | |
| 413797008 | Arginine positive Pseudomonas stutzeri-like | |
| 69937007 | Cedecea | |
| 30854004 | Cedecea davisae | |
| 30854004 | CDC Enteric group 15 | |
| 2345009 | Cedecea lapagei | |
| 83767006 | Cedecea neteri | |
| 83767006 | Cedecea species 4 | |
| 243292007 | Cedecea species 3 | |
| 243293002 | Cedecea species 5 | |
| 114188006 | Cellulomonas | |
| 114196001 | Cellulomonas hominis | |
| 431580002 | Cellulomonas humilata | |
| 409860007 | Cellulosimicrobium | |
| 409862004 | Cellulosimicrobium cellulans | |
| 409862004 | Cellulomonas cellulans | |
| 90699007 | Centipeda | |
| 72002007 | Centipeda periodontii | |
| 16241000 | Chlamydia | |
| 63938009 | Chlamydia trachomatis | |
| 63938009 | Lymphogranuloma venereum virus | |
| 372926008 | Chlamydophila | |
| 413820006 | Chlamydophila abortus | |
| 103514009 | Chlamydophila pneumoniae | |
| 103514009 | Chlamydia pneumoniae | |
| 103514009 | Chlamydia TWAR | |
| 14590003 | Chlamydophila psittaci | |
| 14590003 | Chlamydia psittaci | |
| 14590003 | Chlamydozoon psittaci | |
| 14590003 | Ehrlichia psittaci | |
| 14590003 | Rickettsia psittaci | |
| 14590003 | Rickettsiaformis psittacosis | |
| 20064000 | Chromobacterium | |
| 11042002 | Chromobacterium violaceum | |
| 11042002 | Bacillus violaceus | |
| 11042002 | Chromobacterium janthinum | |
| 115125000 | Chryseobacterium | |
| 113548000 | Chryseobacterium gleum | |
| 113548000 | Flavobacterium gleum | |
| 113549008 | Chryseobacterium indologenes | |
| 113549008 | Flavobacterium indologenes | |
| 113549008 | Flavobacterium aureum | |
| 5274006 | Chryseomonas | |
| 33919008 | Chryseomonas luteola | |
| 33919008 | Pseudomonas luteola | |
| 33919008 | Chryseomonas polytricha | |
| 33919008 | CDC group Ve-1 | |
| 75972000 | Citrobacter | |
| 55744003 | Citrobacter amalonaticus | |
| 55744003 | Levinea amalonatica | |
| 114262000 | Citrobacter braakii | |
| 114263005 | Citrobacter farmeri | |
| 114263005 | Citrobacter amalonaticus, biogroup 1 | |
| 6265002 | Citrobacter freundii | |
| 6265002 | Escherichia freundii | |
| 6265002 | Colobactrum freundii | |
| 721909006 | Extended spectrum beta-lactamase producing Citrobacter freundii | |
| 416990006 | Citrobacter gillenii | |
| 114264004 | Citrobacter koseri | |
| 114264004 | Citrobacter diversus | |
| 114264004 | Levinea malonitica | |
| 417581000 | Citrobacter murliniae | |
| 114444007 | Citrobacter rodentium | |
| 114265003 | Citrobacter sedlakii | |
| 114442006 | Citrobacter werkmanii | |
| 114443001 | Citrobacter youngae | |
| 8191000 | Clostridium | |
| 413881007 | Clostridium, not C. perfringens | |
| 113565009 | Clostridium argentiense | |
| 113565009 | Clostridium botulinum group G | |
| 113565009 | Clostridium argentinense | |
| 31169007 | Clostridium baratii | |
| 31169007 | Clostridium paraperfringens | |
| 31169007 | Clostridium perenne | |
| 31169007 | Clostridium barati | |
| 432470002 | Clostridium bartlettii | |
| 8208007 | Clostridium bifermentans | |
| 413879005 | Clostridium bolteae | |
| 13080008 | Clostridium botulinum | |
| 18065004 | Clostridium botulinum, type A | |
| 8386006 | Clostridium botulinum, type E | |
| 32829006 | Clostridium botulinum, type F | |
| 19084008 | Clostridium butyricum | |
| 19084008 | Clostridium pseudotetanicum | |
| 16616000 | Clostridium cadaveris | |
| 7889007 | Clostridium carnis | |
| 113566005 | Clostridium celerecrescens | |
| 53220001 | Clostridium clostridioforme | |
| 53220001 | Bacteroides clostridiiformis | |
| 76955000 | Clostridium cochlearium | |
| 76955000 | Clostridium lentoputrescens | |
| 24656001 | Clostridium cocleatum | |
| 5933001 | Clostridium difficile | |
| 5933001 | Clostridium difficilis | |
| 57230009 | Clostridium disporicum | |
| 14264000 | Clostridium fallax | |
| 14264000 | Clostridium pseudofallax | |
| 10467001 | Clostridium ghonii | |
| 10467001 | Clostridium ghoni | |
| 112279007 | Clostridium glycolicum | |
| 45724004 | Clostridium haemolyticum | |
| 45724004 | Clostridium hemolyticum | |
| 45724004 | Clostridium novyi type D | |
| 19185007 | Clostridium hastiforme | |
| 416526002 | Clostridium hathewayi | |
| 87443003 | Clostridium histolyticum | |
| 50884003 | Clostridium indolis | |
| 19415008 | Clostridium innocuum | |
| 113580003 | Clostridium intestinale | |
| 113580003 | Clostridium intestinalis | |
| 40423006 | Clostridium irregulare | |
| 40423006 | Clostridium irregularis | |
| 37059005 | Clostridium leptum | |
| 48305001 | Clostridium limosum | |
| 48305001 | CDC group P-1 | |
| 12948002 | Clostridium malenominatum | |
| 45891006 | Clostridium novyi | |
| 45891006 | Clostridium edematiens (OT) | |
| 45891006 | Clostridium oedematiens | |
| 53591005 | Clostridium novyi, type A | |
| 53591005 | Clostridium edematiens, type A | |
| 74494007 | Clostridium novyi, type B | |
| 74494007 | Clostridium edematiens, type B | |
| 29280008 | Clostridium oroticum | |
| 29280008 | Zymobacterium oroticum | |
| 41966004 | Clostridium paraputrificum | |
| 8331005 | Clostridium perfringens | |
| 8331005 | Welchia perfringens | |
| 8331005 | Clostridium welchii | |
| 8331005 | Gas bacillus | |
| 22321006 | Clostridium putrefaciens | |
| 42706008 | Clostridium ramosum | |
| 42706008 | Actinomyces ramosus | |
| 42706008 | Eubacterium ramosum | |
| 42706008 | Eubacterium filamentosum | |
| 42706008 | Ramibacterium ramosum | |
| 42706008 | Bacteroides trichoides | |
| 84958008 | Clostridium sardiniense | |
| 84958008 | Clostridium absonum | |
| 84958008 | Clostridium sardiniensis | |
| 33101000 | Clostridium septicum | |
| 89313005 | Clostridium sordellii | |
| 65891000 | Clostridium sphenoides | |
| 42936009 | Clostridium spiroforme | |
| 41468005 | Clostridium sporogenes | |
| 89918009 | Clostridium sporosphaeroides | |
| 58838009 | Clostridium subterminale | |
| 48321006 | Clostridium symbiosum | |
| 48321006 | Fusobacterium biacutus | |
| 48321006 | Fusobacterium symbiosum | |
| 48321006 | Bacteroides symbiosus | |
| 81909005 | Clostridium tertium | |
| 30917009 | Clostridium tetani | |
| 417046005 | Collinsella | |
| 417399007 | Collinsella aerofaciens | |
| 417399007 | Eubacterium aerofaciens | |
| 432267004 | Collinsella intestinalis | |
| 432759008 | Collinsella stercoris | |
| 413887006 | Comamonas | |
| 413888001 | Comamonas aquatica | |
| 413892008 | Comamonas kerstersii | |
| 81829007 | Comamonas terrigena | |
| 81829007 | CDC EF-19 | |
| 43721005 | Comamonas testosteroni | |
| 43721005 | Pseudomonas testosteroni | |
| 416549000 | Coprococcus | |
| 416184008 | Coprococcus eutactus | |
| 77086004 | Corynebacterium | |
| 243254006 | Corynebacterium accolens | |
| 243254006 | CDC Corynebacterium group G-1 | |
| 113608003 | Corynebacterium afermentans | |
| 113608003 | CDC Corynebacterium group ANF | |
| 113609006 | Corynebacterium afermentans afermentans | |
| 113610001 | Corynebacterium afermentans lipophilum | |
| 113607008 | Corynebacterium ammoniagenes | |
| 113607008 | Brevibacterium ammoniagenes | |
| 113611002 | Corynebacterium amycolatum | |
| 423659000 | Corynebacterium appendicis | |
| 65736001 | Corynebacterium aquaticum | |
| 424012003 | Corynebacterium aquilae | |
| 417499006 | Corynebacterium argentoratense | |
| 424209005 | Corynebacterium atypicum | |
| 385503009 | Corynebacterium aurimucosum | |
| 385503009 | Corynebacterium nigricans | |
| 413925000 | Corynebacterium auris | |
| 424389005 | Corynebacterium auriscanis | |
| 432270000 | Corynebacterium beticola | |
| 44885001 | Corynebacterium bovis | |
| 88866008 | Corynebacterium callunae | |
| 424560007 | Corynebacterium camporealensis | |
| 424721008 | Corynebacterium capitovis | |
| 424906005 | Corynebacterium casei | |
| 422791000 | Corynebacterium caspium | |
| 424459004 | Corynebacterium ciconiae | |
| 417134008 | Corynebacterium confusum | |
| 116461008 | Corynebacterium coyleae | |
| 50169005 | Corynebacterium cystitidis | |
| 50169005 | Corynebacterium renale type III | |
| 5851001 | Corynebacterium diphtheriae | |
| 5851001 | Diphtheria bacillus | |
| 5851001 | Klebs-Loeffler bacillus | |
| 413926004 | Corynebacterium durum | |
| 423379003 | Corynebacterium efficiens | |
| 116389005 | Corynebacterium falsenii | |
| 423568009 | Corynebacterium felinum | |
| 47802009 | Corynebacterium flavescens | |
| 416914001 | Corynebacterium freneyi | |
| 243260006 | Corynebacterium genitalium | |
| 432808003 | Corynebacterium glaucum | |
| 413927008 | Corynebacterium glucuronolyticum | |
| 413927008 | Corynebacterium seminale | |
| 89651003 | Corynebacterium glutamicum | |
| 89651003 | Corynebacterium lilium | |
| 89651003 | Micrococcus glutamicus | |
| 243280007 | CDC Corynebacterium group G-2 | |
| 424529007 | Corynebacterium halotolerans | |
| 54276004 | Corynebacterium hoagii | |
| 413928003 | Corynebacterium imitans | |
| 63410006 | Corynebacterium jeikeium | |
| 63410006 | CDC Corynebacterium group JK | |
| 363777001 | Corynebacterium kroppenstedtii | |
| 88575000 | Corynebacterium kutscheri | |
| 88575000 | Corynebacterium murium | |
| 416863001 | Corynebacterium lipophiloflavum | |
| 363772007 | Corynebacterium macginleyi | |
| 243261005 | Corynebacterium manihot | |
| 446285007 | Corynebacterium massiliense | |
| 424709009 | Corynebacterium mastitidis | |
| 89922004 | Corynebacterium matruchotii | |
| 89922004 | Bacterionema matruchotii | |
| 243262003 | Corynebacterium mediolanum | |
| 83594007 | Corynebacterium minutissimum | |
| 413929006 | Corynebacterium mucifaciens | |
| 302583000 | Corynebacterium murisepticum | |
| 58879005 | Corynebacterium mycetoides | |
| 243263008 | Corynebacterium nephridii | |
| 116462001 | Corynebacterium phocae | |
| 81368007 | Corynebacterium pilosum | |
| 81368007 | Corynebacterium renale type II | |
| 113612009 | Corynebacterium propinquum | |
| 12050008 | Corynebacterium pseudodiphtheriticum | |
| 12050008 | Corynebacterium hofmannii | |
| 243264002 | Corynebacterium pseudogenitalium | |
| 55084001 | Corynebacterium pseudotuberculosis | |
| 55084001 | Corynebacterium ovis | |
| 416570006 | Corynebacterium pseudotuberculostearicum | |
| 450383002 | Corynebacterium pyruviciproducens | |
| 62000003 | Corynebacterium renale | |
| 62000003 | Corynebacterium renale type 1 | |
| 442804004 | Corynebacterium resistens | |
| 131241009 | Corynebacterium riegelii | |
| 243265001 | Corynebacterium rubrum | |
| 416655000 | Corynebacterium simulans | |
| 422898002 | Corynebacterium singulare | |
| 422705004 | Corynebacterium sphenisci | |
| 432362008 | Corynebacterium spheniscorum | |
| 413931002 | Corynebacterium, not C. diphtheriae | |
| 413930001 | Corynebacterium, not C. jeikeium | |
| 63815007 | Corynebacterium striatum | |
| 63815007 | Corynebacterium flavidum | |
| 423784007 | Corynebacterium suicordis | |
| 425307003 | Corynebacterium sundsvallense | |
| 72243003 | Corynebacterium tenuis | |
| 422496009 | Corynebacterium terpenotabidum | |
| 424212008 | Corynebacterium testudinoris | |
| 416311000 | Corynebacterium thomssenii | |
| 416356007 | Corynebacterium tuberculostearicum | |
| 450409000 | Corynebacterium tuscaniense | |
| 450409000 | Corynebacterium tuscaniae | |
| 103428000 | Corynebacterium ulcerans | |
| 113613004 | Corynebacterium urealyticum | |
| 113613004 | CDC Corynebacterium group D-2 | |
| 429443001 | Corynebacterium ureicelerivorans | |
| 11575001 | Corynebacterium variabile | |
| 11575001 | Corynebacterium mooreparkense | |
| 11575001 | Arthrobacter variabilis | |
| 11575001 | Corynebacterium variabilis | |
| 243266000 | Corynebacterium viscosum | |
| 116390001 | Corynebacterium vitaeruminis | |
| 116390001 | Brevibacterium vitarumen | |
| 116390001 | Corynebacterium vitarumen | |
| 116390001 | Corynebacterium vitaruminis | |
| 27101006 | Corynebacterium xerosis | |
| 243267009 | Corynebacterium group, CDC | |
| 243268004 | Corynebacterium group A-3, CDC | |
| 243269007 | Corynebacterium group A-4, CDC | |
| 243270008 | Corynebacterium group A-5, CDC | |
| 243271007 | Corynebacterium group B-1, CDC | |
| 243272000 | Corynebacterium group B-3, CDC | |
| 243274004 | Corynebacterium group C, CDC | |
| 243274004 | Propionibacterium granulosus | |
| 243275003 | Corynebacterium group D-1, CDC | |
| 243276002 | Corynebacterium group E, CDC | |
| 243277006 | Corynebacterium group F-1, CDC | |
| 243278001 | Corynebacterium group F-2, CDC | |
| 243281006 | Corynebacterium group I-1, CDC | |
| 243282004 | Corynebacterium group I-2, CDC | |
| 12220009 | Coxiella | |
| 22533000 | Coxiella burnetii | |
| 444664004 | Cronobacter | |
| 445559002 | Cronobacter dublinensis | |
| 445560007 | Cronobacter malonaticus | |
| 445561006 | Cronobacter muytjensii | |
| 445562004 | Cronobacter sakazakii | |
| 445639005 | Cronobacter turicensis | |
| 416082009 | Cryptobacterium | |
| 417538003 | Cryptobacterium curtum | |
| 416121002 | Cupriavidus | |
| 425009006 | Cupriavidus basilensis | |
| 416329005 | Cupriavidus gilardii | |
| 416329005 | Ralstonia gilardii | |
| 416329005 | Wautersia gilardii | |
| 423135006 | Cupriavidus metallidurans | |
| 432717007 | Cupriavidus necator | |
| 429465001 | Cupriavidus pauculus | |
| 429465001 | Wautersia paucula | |
| 416495009 | Cupriavidus respiraculi | |
| 416495009 | Ralstonia respiraculi | |
| 416495009 | Wautersia respiaculi | |
| 416493002 | Delftia | |
| 20432002 | Delftia acidovorans | |
| 20432002 | Comamonas acidovorans | |
| 20432002 | Pseudomonas acidovorans | |
| 413976002 | Dermabacter | |
| 413977006 | Dermabacter hominis | |
| 413977006 | CDC coryneform group 3 | |
| 413977006 | CDC coryneform group 5 | |
| 115142006 | Dermacoccus | |
| 113776005 | Dermacoccus nishinomiyaensis |
