Connectathon 11 Snapshot

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1.25.1.5 Using the NCI Metathesaurus with FHIR

Vocabulary Work GroupMaturity Level: N/ABallot Status: DSTU 2

1.25.1.5.1 Summary

SourceNCI Metathesaurus the NCI Center for Biomedical Informatics and Information Technology (CBIIT)
SystemThe URI http://ncimeta.nci.nih.gov identifies the NCI Metathesaurus
VersionThere is no version or versioning associated with the NCI metathesaurus
CodeThe Concept Unique Identifier (CUI) is used for the code value for a Metathesaurus concept
DisplayThe name should be used as the display for English usage (e.g. "Aerosol Dose Form" for CUI C1112870)
Filter PropertiesNone are described yet

1.25.1.5.2 Version Issues

There are no staged releases of the NCI metathesaurus, so there is no versioning policy.

1.25.1.5.3 Copyright/License Issues

The NCI metathesaurus is in the public domain, so there are no copyright notices needed in value sets that refer to NCI metathesaurus concepts, and there are no licensing requirements limiting use of NCI metathesaurus concepts in instances or systems.

1.25.1.5.4 MCI Metathesaurus MySQL Database

Like RxNorm the RRF files that are the distributed source of the NCI Metathesaurus can be used to populate a MySQL database that contains the data. This page provides SQL statements that describe how to implement the features of the NCI Metathesaurus correctly against this database. They are provided only for implementer convenience, and do not imply that any particular approach must be used in implementations. (Note: for consistency, the RxNorm table and column names are used and the CUIs are 1 character longer, so the scripts must be updated).

For example, the correct display name for a CUI is

  select STR from rxnconso where RXCUI = :code and SAB = 'RXNORM' and TTY <> 'SY'
.

1.25.1.5.5 NCI metathesaurus Filter Properties

This section documents the property filters that can be used with the RxNorm code system in value set composition statements.

The base SQL statement for returning a list of CUIS that conform to these filters is:

  select RXCUI from RXNCONSO where SAB = 'RXNORM' and TTY <> 'SY' 

1.25.1.5.5.1 Semantic Type

DescriptionAllows to choose a set of CUIs based on their Semantic Type
Property NameSTY
Operations Allowed= / in
Values Allowed[column:]value
CommentsIf not column is specified, the default column is TUI
SQL
and RXCUI in (select RXCUI from RXNSTY where [:column] = :value)

1.25.1.5.5.2 Source

DescriptionAllows for selection of the set of concepts that have mappings to a particular rxnorm source
Property NameSAB
Operations Allowed= / in
Values AllowedValues from the SAB table (e.g. select RSAB from RXNsab)
SQL
and RXCUI in (select RXCUI from RXNconso where SAB = :value)

1.25.1.5.5.3 Term Type

DescriptionAllows for selection of a concept based on its designated type
Property NameTTY
Operations Allowed= / in
Values AllowedTTY values from the RxNorm Concept table (e.g. select distinct TTY from rxnconso)
SQL
and TTY = :value

1.25.1.5.5.4 Relationship

DescriptionAllows for selection of a concept based on its relationships
Property Name[REL]
Operations Allowed= / in
Values AllowedCUI:[RXCUI] or AUI:[RXAUI] must be a valid CUI or AUI. Note that a CUI does not need to have a SAB=RXNORM entry to be used here
Comments[REL] (:rel) is one of AQ, CHD, PAR, QB, RB, RN, RO, RQ, SIB or SY
SQL for CUI:
and (RXCUI in (select RXCUI from rxnconso where RXCUI in (select RXCUI1 from rxnrel where REL = :rel and RXCUI2 = :value))
for AUI:
and (RXCUI in (select RXCUI from rxnconso where RXAUI in (select RXAUI1 from rxnrel where REL = :rel and RXAUI2 = :value))

1.25.1.5.5.5 Relationship Type

DescriptionAllows for selection of a concept based on the type of its relationships
Property Name[RELA]
Operations Allowed= / in
Values AllowedCUI:[RXCUI] or AUI:[RXAUI] must be a valid CUI or AUI. Note that a CUI does not need to have a SAB=RXNORM entry to be used here
Comments[RELA] (:rela) is one of the relationship types listed in the NCI file "Relationships_Help_Page.txt" - the current list (nearly 1000 types) is at the end of the page
SQL for CUI:
and (RXCUI in (select RXCUI from rxnconso where RXCUI in (select RXCUI1 from rxnrel where RELA = :rel and RXCUI2 = :value))
for AUI:
and (RXCUI in (select RXCUI from rxnconso where RXAUI in (select RXAUI1 from rxnrel where RELA = :rel and RXAUI2 = :value))

1.25.1.5.6 Implicit Value Sets

This section needs investigation

1.25.1.5.7 Current NCI Metathesaurus relationship types

  • 3_UTR_of
  • 5_UTR_of
  • Abnormal_Cell_Affected_By_Chemical_Or_Drug
  • Abnormality_Associated_With_Allele
  • Abstract_of
  • access_device_used_by
  • access_of
  • action_of
  • active_ingredient_of
  • active_metabolites_of
  • Activity_Of_Allele
  • adheres_to
  • adjacent_to
  • afferent_to
  • agent_in
  • alias_of
  • Allele_Absent_From_Wild-type_Chromosomal_Location
  • Allele_Has_Abnormality
  • Allele_Has_Activity
  • Allele_In_Chromosomal_Location
  • Allele_of
  • Allele_Plays_Altered_Role_In_Process
  • Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug
  • allelic_variant_of
  • Amino_Acid_Variant_of
  • analyzed_by
  • analyzes
  • Anatomic_Structure_Has_Location
  • Anatomic_Structure_Is_Physical_Part_Of
  • anatomical_site
  • Anatomy_Originated_From_Biological_Process
  • Aneuploidy_Addition_of
  • Aneuploidy_Deletion_of
  • anterior_to
  • application_of
  • Arm_Location_of
  • Arm_of
  • arterial_supply_of
  • articulates_with
  • associated_disease
  • associated_finding_of
  • associated_genetic_condition
  • associated_morphology_of
  • associated_procedure_of
  • associated_with
  • Associated_With_Malfunction_Of_Gene_Product
  • attaches_to
  • attributed_constitutional_part_of
  • attributed_continuous_with
  • attributed_part_of
  • attributed_regional_part_of
  • Author_of
  • Band_Location_of
  • Band_of
  • bearer_of
  • Biological_Process_Has_Associated_Location
  • Biological_Process_Has_Initiator_Chemical_Or_Drug
  • Biological_Process_Has_Initiator_Process
  • Biological_Process_Has_Result_Anatomy
  • Biological_Process_Has_Result_Biological_Process
  • Biological_Process_Has_Result_Chemical_Or_Drug
  • Biological_Process_Involves_Chemical_Or_Drug
  • Biological_Process_Involves_Gene_Product
  • Biological_Process_Is_Part_Of_Process
  • Biological_Process_Results_From_Biological_Process
  • Biomarker_Type_Includes_Gene
  • Biomarker_Type_Includes_Gene_Product
  • blood_supply_of
  • bounded_by
  • bounds
  • branch_of
  • branch_part_of
  • causative_agent_of
  • cause_of
  • cell_connecting_part_of
  • cell_shape_of
  • cell_surface_specialization_of
  • Cell_Type_Is_Associated_With_EO_Disease
  • Cell_Type_Or_Tissue_Affected_By_Chemical_Or_Drug
  • Centromere_of
  • CH3_Status_of
  • Chemical_Or_Drug_Affects_Abnormal_Cell
  • Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue
  • Chemical_Or_Drug_Affects_Gene_Product
  • Chemical_Or_Drug_Has_Mechanism_Of_Action
  • Chemical_Or_Drug_Has_Physiologic_Effect
  • Chemical_Or_Drug_Initiates_Biological_Process
  • Chemical_Or_Drug_Is_Metabolized_By_Enzyme
  • Chemical_Or_Drug_Is_Product_Of_Biological_Process
  • Chemical_Or_Drug_Metabolism_Is_Associated_With_Allele
  • Chemical_Or_Drug_Plays_Role_In_Biological_Process
  • chemical_structure_of
  • Chemotherapy_Regimen_Has_Component
  • Chromosomal_Location_of
  • Chromosomal_Location_Of_Allele
  • Chromosomal_Location_of_Wild-type_Gene
  • Chromosomal_Structural_Variant
  • Chromosome_Involved_In_Cytogenetic_Abnormality
  • Chromosome_Mapped_To_Disease
  • class_code_classified_by
  • classified_as
  • classifies
  • classifies_class_code
  • clinical_course_of
  • common_name_of
  • Completely_Excised_Anatomy_Has_Procedure
  • Completely_Excised_Anatomy_May_Have_Procedure
  • Complex_Has_Physical_Part
  • component_of
  • Concept_In_Subset
  • conceptual_part_of
  • conjugate_component_of
  • consider
  • consider_from
  • consists_of
  • Constituent_Amino_Acid_of
  • Constituent_Element_of
  • Constituent_Protein_of
  • Constituent_Variant_of
  • constitutes
  • constitutional_part_of
  • contained_in
  • contains
  • context_binding_of
  • continuation_branch_of
  • continuous_with
  • continuous_with_distally
  • continuous_with_proximally
  • contraindicated_with_disease
  • contraindicating_class_of
  • contraindicating_mechanism_of_action_of
  • contraindicating_physiologic_effect_of
  • Cytogenetic_Abnormality_Involves_Chromosome
  • Data_Element_Of
  • definitional_manifestation_of
  • degree_of
  • Deleted_Region_End_Band
  • Deleted_Region_Start_Band
  • denoted_by
  • denotes
  • dependent_of
  • derivatized_to
  • derives_from
  • determines_parameter_for
  • determines_property
  • develops_from
  • device_used_by
  • diagnosed_by
  • diagnoses
  • direct_device_of
  • direct_morphology_of
  • direct_procedure_site_of
  • direct_substance_of
  • Disease_Excludes_Abnormal_Cell
  • Disease_Excludes_Cytogenetic_Abnormality
  • Disease_Excludes_Finding
  • Disease_Excludes_Molecular_Abnormality
  • Disease_Excludes_Normal_Cell_Origin
  • Disease_Excludes_Normal_Tissue_Origin
  • Disease_Excludes_Primary_Anatomic_Site
  • Disease_Has_Abnormal_Cell
  • Disease_Has_Accepted_Treatment_With_Regimen
  • Disease_Has_Associated_Anatomic_Site
  • Disease_Has_Associated_Disease
  • Disease_Has_Associated_Gene
  • Disease_Has_Cytogenetic_Abnormality
  • Disease_Has_Finding
  • Disease_Has_Metastatic_Anatomic_Site
  • Disease_Has_Molecular_Abnormality
  • Disease_Has_Normal_Cell_Origin
  • Disease_Has_Normal_Tissue_Origin
  • Disease_Has_Primary_Anatomic_Site
  • Disease_Is_Grade
  • Disease_Is_Marked_By_Gene
  • Disease_Is_Stage
  • Disease_Mapped_To_Chromosome
  • Disease_Mapped_To_Gene
  • Disease_May_Have_Abnormal_Cell
  • Disease_May_Have_Associated_Disease
  • Disease_May_Have_Cytogenetic_Abnormality
  • Disease_May_Have_Finding
  • Disease_May_Have_Molecular_Abnormality
  • Disease_May_Have_Normal_Cell_Origin
  • Disease_Pathogenesis_Involves_Gene
  • disease_with_contraindication
  • distal_to
  • DOI_of
  • dose_form_of
  • doseformgroup_of
  • drains_into
  • drug_contraindicated_for
  • due_to
  • Duplicated_Region_End_Band
  • Duplicated_Region_Start_Band
  • effect_may_be_inhibited_by
  • Effect_of
  • efferent_to
  • encapsulated_component_of
  • Encoded_by
  • Encodes
  • Endogenous_Product_Related_To
  • energy_used_by
  • entrapment_site_of
  • entrapped_component_of
  • entry_version_of
  • Enzyme_Metabolizes_Chemical_Or_Drug
  • EO_Anatomy_Is_Associated_With_EO_Disease
  • EO_Disease_Has_Associated_Cell_Type
  • EO_Disease_Has_Associated_EO_Anatomy
  • EO_Disease_Has_Property_Or_Attribute
  • EO_Disease_Maps_To_Human_Disease
  • epithelial_cell_shape_of
  • evaluation_of
  • Excised_Anatomy_Has_Procedure
  • Excised_Anatomy_May_Have_Procedure
  • exhibited_by
  • exhibits
  • Exon_of
  • expanded_form_of
  • external_to
  • fascicular_architecture_of
  • Feature_of
  • finding_context_of
  • finding_informer_of
  • finding_method_of
  • finding_site_of
  • focus_of
  • form_of
  • function_of
  • Gene_Associated_With_Disease
  • Gene_Encodes_Gene_Product
  • Gene_Found_In_Organism
  • Gene_Has_Abnormality
  • Gene_Has_Physical_Location
  • Gene_In_Chromosomal_Location
  • Gene_Involved_In_Molecular_Abnormality
  • Gene_Involved_In_Pathogenesis_Of_Disease
  • Gene_Is_Biomarker_Of
  • Gene_Is_Biomarker_Type
  • Gene_Is_Element_In_Pathway
  • Gene_Location_of
  • Gene_Mapped_To_Disease
  • Gene_Mutant_Encodes_Gene_Product_Sequence_Variation
  • Gene_of
  • Gene_Plays_Role_In_Process
  • Gene_Product_Affected_By_Chemical_Or_Drug
  • Gene_Product_Encoded_By_Gene
  • Gene_Product_Expressed_In_Tissue
  • Gene_Product_Has_Abnormality
  • Gene_Product_Has_Associated_Anatomy
  • Gene_Product_Has_Biochemical_Function
  • Gene_Product_Has_Chemical_Classification
  • Gene_Product_Has_Organism_Source
  • Gene_Product_Has_Structural_Domain_Or_Motif
  • Gene_Product_Is_Biomarker_Of
  • Gene_Product_Is_Biomarker_Type
  • Gene_Product_Is_Element_In_Pathway
  • Gene_Product_Is_Physical_Part_Of
  • Gene_Product_Malfunction_Associated_With_Disease
  • Gene_Product_Plays_Role_In_Biological_Process
  • Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant
  • Genomic_Mutation_Of
  • germ_origin_of
  • gives_rise_to
  • Has_3_UTR
  • Has_5_UTR
  • has_Abstract
  • has_access
  • has_action
  • has_active_ingredient
  • has_active_metabolites
  • has_additive
  • has_adherent
  • has_affiliation
  • has_agent
  • has_alias
  • Has_Allele
  • has_allelic_variant
  • Has_Amino_Acid_Variant
  • Has_Aneuploidy_Addition
  • Has_Aneuploidy_Deletion
  • has_application
  • Has_Arm
  • Has_Arm_Location
  • has_arterial_supply
  • has_associated_finding
  • has_associated_morphology
  • has_associated_procedure
  • has_atmospheric_component
  • has_attributed_constitutional_part
  • has_attributed_part
  • has_attributed_regional_part
  • has_Author
  • Has_Band
  • Has_Band_Location
  • has_been_treated
  • has_bioassay_data
  • has_bioassays
  • has_biomaterial_characteristics
  • has_blood_supply
  • has_branch
  • has_branch_part
  • has_cancer_site
  • has_category
  • has_causative_agent
  • Has_CDRH_Parent
  • has_cell_connecting_part
  • has_cell_shape
  • has_cell_surface_specialization
  • Has_Centromere
  • Has_CH3_Status
  • has_chemical_structure
  • has_chromosomal_aberration_classification
  • Has_Chromosomal_Location
  • has_citation
  • has_clinical_course
  • has_clinical_finding
  • has_clinical_record
  • has_clinical_treatment
  • has_common_name
  • has_component
  • has_component_part
  • has_compound
  • has_conceptual_part
  • has_conjugated_component_part
  • Has_Constituent_Amino_Acid
  • Has_Constituent_Element
  • Has_Constituent_Protein
  • Has_Constituent_Variant
  • has_constitutional_part
  • has_context_binding
  • has_continuation_branch
  • has_contraindicated_drug
  • has_contraindicating_class
  • has_contraindicating_mechanism_of_action
  • has_contraindicating_physiologic_effect
  • has_cubic_volume
  • Has_Data_Element
  • has_database
  • has_database_entry_type
  • has_datum_value
  • has_definitional_manifestation
  • has_degree
  • has_dependent
  • has_diameter
  • has_direct_device
  • has_direct_morphology
  • has_direct_procedure_site
  • has_direct_substance
  • has_disease_location
  • has_disease_staging
  • has_disease_state
  • has_DOI
  • has_donor
  • has_dose_form
  • has_doseformgroup
  • Has_Effect
  • has_encapsulated_component_part
  • has_endpoint_of_measurement
  • has_entrapment_site
  • has_entrapped_component_part
  • has_entry_version
  • has_epithelial_cell_shape
  • has_evaluation
  • Has_Exon
  • has_expanded_form
  • has_experiment_design
  • has_experiment_design_type
  • has_experiment_factors
  • has_factor_value
  • has_factor_value_ontology_entry
  • has_family_member
  • has_family_relationship
  • has_fascicular_architecture
  • Has_Feature
  • has_feature_shape
  • has_fiducials
  • has_finding_context
  • has_finding_informer
  • has_finding_method
  • has_finding_site
  • has_focus
  • has_form
  • Has_Free_Acid_Or_Base_Form
  • has_function
  • Has_Gene
  • Has_Gene_Location
  • Has_Gene_Product_Element
  • Has_Genomic_Mutation
  • has_germ_origin
  • has_hardware
  • has_height
  • has_host
  • has_host_part
  • has_identification_type
  • has_image_format
  • has_indicator
  • has_indirect_device
  • has_indirect_morphology
  • has_indirect_procedure_site
  • has_individual
  • has_individual_genetic_characteristics
  • has_ingredient
  • has_ingredients
  • has_inherent_3d_shape
  • has_inheritance_type
  • has_initial_time_point
  • has_innervation_source
  • has_input_participant
  • has_insertion
  • has_integral_part
  • has_intent
  • has_interpretation
  • Has_Intron
  • has_Journal_Name
  • has_laterality
  • has_length
  • has_location
  • has_lymphatic_drainage
  • has_MAGE_description
  • has_manifestation
  • has_manufacturer
  • has_mapping_qualifier
  • has_mass
  • Has_Maternal_Uniparental_Disomy
  • has_maximum_measurement
  • has_measure
  • has_measurement
  • has_measurement_method
  • has_measurement_type
  • has_mechanism_of_action
  • has_member
  • has_method
  • Has_Mode_of_Inheritance
  • has_multi_level_category
  • has_muscle_attachment
  • has_muscle_insertion
  • has_muscle_origin
  • has_nerve_supply
  • Has_NICHD_Parent
  • has_node_value
  • has_node_value_type
  • has_nodes
  • Has_Nucleotide_Repeat
  • Has_Nucleotide_Variant
  • has_nutrient_component
  • has_occurrence
  • has_organism_part
  • has_orientation
  • has_origin
  • has_output_participant
  • has_owner
  • has_owning_affiliate
  • has_owning_section
  • has_owning_subsection
  • has_parent_organization
  • has_part
  • has_part_modified
  • has_participant
  • Has_Paternal_Uniparental_Disomy
  • has_pathological_process
  • has_performer
  • has_permuted_term
  • has_pharmacokinetics
  • Has_Physical_Part_Of_Anatomic_Structure
  • has_physical_state
  • has_physiologic_effect
  • has_precise_ingredient
  • has_primary_segmental_supply
  • has_print_name
  • has_prior_disease_state
  • has_priority
  • has_procedure_context
  • has_procedure_device
  • has_procedure_morphology
  • has_procedure_site
  • has_product_component
  • has_property
  • has_property_set
  • has_protocol
  • has_providers
  • has_Publication_Year
  • has_PubMedID
  • has_quality
  • has_quantified_form
  • has_reason_for_deprecation
  • has_recipient_category
  • has_regional_part
  • has_result
  • has_revision_status
  • has_role
  • has_route_of_administration
  • Has_RT_Product
  • Has_Salt_Form
  • has_scale
  • has_scale_type
  • has_secondary_segmental_supply
  • has_segment
  • has_segmental_composition
  • has_segmental_supply
  • has_severity
  • has_shape
  • has_single_level_category
  • has_software
  • has_sort_version
  • has_species
  • has_specimen
  • has_specimen_procedure
  • has_specimen_source_identity
  • has_specimen_source_morphology
  • has_specimen_source_topography
  • has_specimen_substance
  • has_subject_relationship_context
  • Has_Subset
  • has_supported_concept_property
  • has_supported_concept_relationship
  • has_surgical_approach
  • has_systemic_part
  • Has_Target
  • Has_Telomere
  • has_temperature_condition
  • has_temporal_context
  • has_test_result
  • has_test_type
  • has_therapeutic_class
  • has_time_period
  • has_tradename
  • Has_Transcript
  • has_treatment
  • has_tributary
  • has_type
  • has_unit
  • has_unit_of_measure
  • has_units
  • has_URI
  • has_venous_drainage
  • has_version
  • Human_Disease_Maps_To_EO_Disease
  • Human_Sex_Determinant
  • icd_dagger
  • identification_type_of
  • Imaged_Anatomy_Has_Procedure
  • included_in
  • includes
  • indicator_of
  • indirect_device_of
  • indirect_morphology_of
  • indirect_procedure_site_of
  • induced_by
  • induces
  • inferior_to
  • ingredient_of
  • ingredients_of
  • inherence_for
  • inherent_3d_shape_of
  • inheres_in
  • inheritance_type_of
  • innervates
  • insertion_of
  • instrument_used_by
  • intent_of
  • internal_to
  • interpretation_of
  • interprets
  • Intron_of
  • INV_Chromosomal_Structural_Variant
  • INV_Deleted_Region_End_Band
  • INV_Deleted_Region_Start_Band
  • INV_Duplicated_Region_End_Band
  • INV_Duplicated_Region_Start_Band
  • INV_Human_Sex_Determinant
  • INV_Inverted_Region_End_Band
  • INV_Inverted_Region_End_Exon
  • INV_Inverted_Region_End_Gene
  • INV_Inverted_Region_End_UTR
  • INV_Inverted_Region_Start_Band
  • INV_Inverted_Region_Start_Exon
  • INV_Inverted_Region_Start_Gene
  • INV_Inverted_Region_Start_Intron
  • INV_Involves
  • INV_Isochromosome_Origin
  • INV_Karyotype_Class
  • INV_Source_Band
  • INV_Source_Exon
  • INV_Source_Gene
  • INV_Source_Intron
  • INV_Target_Band
  • INV_Target_Exon
  • INV_Target_Gene
  • INV_Target_Intron
  • inverse_has_additive
  • inverse_has_affiliation
  • inverse_has_atmospheric_component
  • inverse_has_been_treated
  • inverse_has_bioassay_data
  • inverse_has_bioassays
  • inverse_has_biomaterial_characteristics
  • inverse_has_cancer_site
  • inverse_has_category
  • inverse_has_chromosomal_aberration_classification
  • inverse_has_citation
  • inverse_has_clinical_finding
  • inverse_has_clinical_record
  • inverse_has_clinical_treatment
  • inverse_has_compound
  • inverse_has_cubic_volume
  • inverse_has_database
  • inverse_has_database_entry_type
  • inverse_has_diameter
  • inverse_has_disease_location
  • inverse_has_disease_staging
  • inverse_has_disease_state
  • inverse_has_donor
  • inverse_has_experiment_design
  • inverse_has_experiment_design_type
  • inverse_has_experiment_factors
  • inverse_has_factor_value
  • inverse_has_factor_value_ontology_entry
  • inverse_has_family_member
  • inverse_has_family_relationship
  • inverse_has_feature_shape
  • inverse_has_fiducials
  • inverse_has_hardware
  • inverse_has_height
  • inverse_has_host
  • inverse_has_host_part
  • inverse_has_image_format
  • inverse_has_individual
  • inverse_has_individual_genetic_characteristics
  • inverse_has_initial_time_point
  • inverse_has_length
  • inverse_has_MAGE_description
  • inverse_has_manufacturer
  • inverse_has_mass
  • inverse_has_maximum_measurement
  • inverse_has_measurement_type
  • inverse_has_node_value
  • inverse_has_node_value_type
  • inverse_has_nodes
  • inverse_has_nutrient_component
  • inverse_has_organism_part
  • inverse_has_owner
  • inverse_has_parent_organization
  • inverse_has_part_modified
  • inverse_has_performer
  • inverse_has_prior_disease_state
  • inverse_has_property_set
  • inverse_has_protocol
  • inverse_has_providers
  • inverse_has_reason_for_deprecation
  • inverse_has_software
  • inverse_has_species
  • inverse_has_test_result
  • inverse_has_test_type
  • inverse_has_treatment
  • inverse_has_type
  • inverse_has_units
  • inverse_has_URI
  • inverse_isa
  • inverse_was_tested_for
  • Inverted_Region_End_Band
  • Inverted_Region_End_Exon
  • Inverted_Region_End_Gene
  • Inverted_Region_End_UTR
  • Inverted_Region_Start_Band
  • Inverted_Region_Start_Exon
  • Inverted_Region_Start_Gene
  • Inverted_Region_Start_Intron
  • Involves
  • Is_Abnormal_Cell_Of_Disease
  • Is_Abnormality_Of_Gene
  • Is_Abnormality_Of_Gene_Product
  • is_anatomical_site_of
  • Is_Associated_Anatomic_Site_Of
  • Is_Associated_Anatomy_Of_Gene_Product
  • Is_Associated_Disease_Of
  • Is_Biochemical_Function_Of_Gene_Product
  • is_borne_by
  • Is_Chemical_Classification_Of_Gene_Product
  • Is_Chromosomal_Location_Of_Gene
  • Is_Component_Of_Chemotherapy_Regimen
  • Is_Cytogenetic_Abnormality_Of_Disease
  • is_datum_of
  • Is_Finding_Of_Disease
  • Is_Grade_Of_Disease
  • is_integral_part_of
  • is_interpreted_by
  • Is_Location_Of
  • Is_Location_Of_Anatomic_Structure
  • Is_Location_Of_Biological_Process
  • Is_Marked_By_Gene_Product
  • is_measurement_endpoint_of
  • Is_Mechanism_Of_Action_Of_Chemical_Or_Drug
  • Is_Metastatic_Anatomic_Site_Of_Disease
  • Is_Molecular_Abnormality_Of_Disease
  • Is_Normal_Cell_Origin_Of_Disease
  • Is_Normal_Tissue_Origin_Of_Disease
  • Is_Not_Abnormal_Cell_Of_Disease
  • Is_Not_Cytogenetic_Abnormality_Of_Disease
  • Is_Not_Finding_Of_Disease
  • Is_Not_Molecular_Abnormality_Of_Disease
  • Is_Not_Normal_Cell_Origin_Of_Disease
  • Is_Not_Normal_Tissue_Origin_Of_Disease
  • Is_Not_Primary_Anatomic_Site_Of_Disease
  • Is_Organism_Source_Of_Gene_Product
  • Is_Physical_Location_Of_Gene
  • Is_Physiologic_Effect_Of_Chemical_Or_Drug
  • Is_Primary_Anatomic_Site_Of_Disease
  • Is_Property_Or_Attribute_Of_EO_Disease
  • Is_Qualified_By
  • is_realized_in
  • Is_Related_To_Endogenous_Product
  • Is_Stage_Of_Disease
  • Is_Structural_Domain_Or_Motif_Of_Gene_Product
  • Is_Target_Of_Agent
  • is_temperature_of
  • is_time_period_of
  • isa
  • Isochromosome_Origin
  • Journal_Name_of
  • Karyotype_Class
  • Kind_Is_Domain_Of
  • Kind_Is_Range_Of
  • larger_than
  • laterality_of
  • location_of
  • lymphatic_drainage_of
  • manifestation_of
  • mapped_from
  • mapped_to
  • mapping_qualifier_of
  • Maternal_Uniparental_Disomy_of
  • May_Be_Abnormal_Cell_Of_Disease
  • May_Be_Associated_Disease_Of_Disease
  • may_be_caused_by
  • May_Be_Cytogenetic_Abnormality_Of_Disease
  • may_be_diagnosed_by
  • May_Be_Finding_Of_Disease
  • May_Be_Molecular_Abnormality_Of_Disease
  • May_Be_Normal_Cell_Origin_Of_Disease
  • may_be_prevented_by
  • may_be_qualified_by
  • may_be_treated_by
  • may_cause
  • may_diagnose
  • may_inhibit_effect_of
  • may_prevent
  • may_qualify
  • may_treat
  • measure_of
  • measured_by
  • measurement_method_of
  • measurement_of
  • measures
  • mechanism_of_action_of
  • member_of
  • metabolic_site_of
  • method_of
  • modality_is_related_to
  • Mode_of_Inheritance
  • Molecular_Abnormality_Involves_Gene
  • mth_british_form_of
  • mth_expanded_form_of
  • mth_has_british_form
  • mth_has_expanded_form
  • mth_has_plain_text_form
  • mth_has_xml_form
  • mth_plain_text_form_of
  • mth_xml_form_of
  • muscle_attachment_of
  • muscle_insertion_of
  • muscle_origin_of
  • Negative_Protein_Expression
  • Negatively_Expressed_By
  • negatively_regulated_by
  • negatively_regulates
  • nerve_supply_of
  • Nucleotide_Repeat_of
  • Nucleotide_Variant_of
  • occurs_after
  • occurs_before
  • occurs_in
  • Organism_Has_Gene
  • orientation_of
  • origin_of
  • owning_affiliate_of
  • owning_section_of
  • owning_subsection_of
  • parameter_determined_from
  • Parent_Is_CDRH
  • Parent_Is_NICHD
  • part_component_of
  • part_of
  • Partially_Excised_Anatomy_Has_Procedure
  • Partially_Excised_Anatomy_May_Have_Procedure
  • participates_in
  • Paternal_Uniparental_Disomy_of
  • pathological_process_of
  • Pathway_Has_Gene_Element
  • permuted_term_of
  • pharmacokinetics_of
  • physical_state_of
  • physiologic_effect_of
  • Positive_Protein_Expression
  • Positively_Expressed_By
  • positively_regulated_by
  • positively_regulates
  • posterior_to
  • precise_ingredient_of
  • primary_segmental_supply_of
  • print_name_of
  • priority_of
  • procedure_context_of
  • procedure_device_of
  • Procedure_Has_Completely_Excised_Anatomy
  • Procedure_Has_Excised_Anatomy
  • Procedure_Has_Imaged_Anatomy
  • Procedure_Has_Partially_Excised_Anatomy
  • Procedure_Has_Target_Anatomy
  • Procedure_May_Have_Completely_Excised_Anatomy
  • Procedure_May_Have_Excised_Anatomy
  • Procedure_May_Have_Partially_Excised_Anatomy
  • procedure_morphology_of
  • procedure_site_of
  • Process_Altered_By_Allele
  • Process_Includes_Biological_Process
  • Process_Initiates_Biological_Process
  • Process_Involves_Gene
  • product_component_of
  • projects_from
  • projects_to
  • projects_towards
  • property_determined_from
  • property_of
  • proximal_to
  • Publication_Year_of
  • PubMedID_of
  • Qualifier_Applies_To
  • quality_of
  • quantified_form_of
  • reagent_used_in
  • realizes
  • receives_attachment
  • receives_drainage_from
  • receives_input_from
  • receives_projection_from
  • recipient_category_of
  • reformulated_to
  • reformulation_of
  • Regimen_Has_Accepted_Use_For_Disease
  • regional_part_of
  • regulated_by
  • regulates
  • related_modality
  • related_to
  • replaced_by
  • replaces
  • responsive_to_stimulus
  • result_of
  • result_of_regulation
  • results_in
  • revision_status_of
  • Role_Has_Domain
  • Role_Has_Parent
  • Role_Has_Range
  • Role_Is_Parent_Of
  • role_of
  • route_of_administration_of
  • RT_Product_of
  • scale_of
  • scale_type_of
  • secondary_segmental_supply_of
  • see
  • see_from
  • Segment_of
  • segmental_composition_of
  • segmental_supply_of
  • sends_output_to
  • severity_of
  • shape_of
  • sib_in_branch_of
  • sib_in_isa
  • sib_in_part_of
  • sib_in_tributary_of
  • site_of_metabolism
  • smaller_than
  • sort_version_of
  • Source_Band
  • Source_Exon
  • Source_Gene
  • Source_Intron
  • specifies_value
  • specimen_of
  • specimen_procedure_of
  • specimen_source_identity_of
  • specimen_source_morphology_of
  • specimen_source_topography_of
  • specimen_substance_of
  • stimulus_causes_response
  • subject_relationship_context_of
  • Subset_Includes_Concept
  • Subset_of
  • substance_used_by
  • Subsumed_By
  • Subsumes
  • superior_to
  • supported_concept_property_in
  • supported_concept_relationship_in
  • surgical_approach_of
  • surrounded_by
  • surrounds
  • systemic_part_of
  • Target_Anatomy_Has_Procedure
  • Target_Band
  • Target_Exon
  • Target_Gene
  • Target_Intron
  • technique_used_for
  • Telomere_of
  • temporal_context_of
  • therapeutic_class_of
  • Tissue_Is_Expression_Site_Of_Gene_Product
  • tradename_of
  • Transcript_of
  • treated_by
  • treats
  • tributary_of
  • unit_of
  • unit_of_measurement_of
  • use
  • used_by
  • used_for
  • uses
  • uses_access_device
  • uses_device
  • uses_energy
  • uses_instrument
  • uses_reagent
  • uses_substance
  • uses_technique
  • value_specified_at
  • venous_drainage_of
  • version_of
  • was_tested_for