FHIR Cross-Version Extensions package for FHIR R4 from FHIR R5
0.0.1-snapshot-2 - informative
FHIR Cross-Version Extensions package for FHIR R4 from FHIR R5
0.0.1-snapshot-2 - informative
FHIR Cross-Version Extensions package for FHIR R4 from FHIR R5 - Version 0.0.1-snapshot-2. See the Directory of published versions
| Official URL: http://hl7.org/fhir/5.0/ValueSet/R5-genomicstudy-dataformat-for-R4 | Version: 0.0.1-snapshot-2 | |||
| Standards status: Informative | Maturity Level: 1 | Responsible: Clinical Genomics | Computable Name: R5_genomicstudy_dataformat_for_R4 | |
| This cross-version ValueSet represents concepts from http://hl7.org/fhir/ValueSet/genomicstudy-dataformat | 5.0.0 for use in FHIR R4. Concepts not present here have direct equivalent mappings crossing all versions from R5 to R4. |
References
http://hl7.org/fhir/genomicstudy-dataformat version 5.0.0| Code | Display |
| bam | BAM |
| bed | BED |
| bedpe | BEDPE |
| bedgraph | BedGraph |
| bigbed | bigBed |
| bigWig | bigWig |
| birdsuite-files | Birdsuite-Files |
| broadpeak | broadPeak |
| cbs | CBS |
| chemical-reactivity-probing-profiles | Chemical-Reactivity-Probing-Profiles |
| chrom-sizes | chrom-sizes |
| cn | CN |
| custom-file-formats | Custom-File-Formats |
| cytoband | Cytoband |
| fasta | FASTA |
| gct | GCT |
| cram | CRAM |
| genepred | genePred |
| gff-gtf | GFF/GTF |
| gistic | GISTIC |
| goby | Goby |
| gwas | GWAS |
| igv | IGV |
| loh | LOH |
| maf-multiple-alignment-format | MAF-Multiple Alignment Format |
| maf-mutation-annotation-format | MAF-Mutation-Annotation-Format |
| merged-bam-file | Merged BAM File |
| mut | MUT |
| narrowpeak | narrowPeak |
| psl | PSL |
| res | RES |
| rna-secondary-structure-formats | RNA-Secondary-Structure-Formats |
| sam | SAM |
| sample-info-attributes-file | Sample-Info-Attributes-file |
| seg | SEG |
| tdf | TDF |
| track-line | Track Line |
| type-line | Type Line |
| vcf | VCF |
| wig | WIG |
This value set expansion contains 40 concepts.
| Code | System | Display |
| bam | http://hl7.org/fhir/genomicstudy-dataformat | BAM |
| bed | http://hl7.org/fhir/genomicstudy-dataformat | BED |
| bedpe | http://hl7.org/fhir/genomicstudy-dataformat | BEDPE |
| bedgraph | http://hl7.org/fhir/genomicstudy-dataformat | BedGraph |
| bigbed | http://hl7.org/fhir/genomicstudy-dataformat | bigBed |
| bigWig | http://hl7.org/fhir/genomicstudy-dataformat | bigWig |
| birdsuite-files | http://hl7.org/fhir/genomicstudy-dataformat | Birdsuite-Files |
| broadpeak | http://hl7.org/fhir/genomicstudy-dataformat | broadPeak |
| cbs | http://hl7.org/fhir/genomicstudy-dataformat | CBS |
| chemical-reactivity-probing-profiles | http://hl7.org/fhir/genomicstudy-dataformat | Chemical-Reactivity-Probing-Profiles |
| chrom-sizes | http://hl7.org/fhir/genomicstudy-dataformat | chrom-sizes |
| cn | http://hl7.org/fhir/genomicstudy-dataformat | CN |
| custom-file-formats | http://hl7.org/fhir/genomicstudy-dataformat | Custom-File-Formats |
| cytoband | http://hl7.org/fhir/genomicstudy-dataformat | Cytoband |
| fasta | http://hl7.org/fhir/genomicstudy-dataformat | FASTA |
| gct | http://hl7.org/fhir/genomicstudy-dataformat | GCT |
| cram | http://hl7.org/fhir/genomicstudy-dataformat | CRAM |
| genepred | http://hl7.org/fhir/genomicstudy-dataformat | genePred |
| gff-gtf | http://hl7.org/fhir/genomicstudy-dataformat | GFF/GTF |
| gistic | http://hl7.org/fhir/genomicstudy-dataformat | GISTIC |
| goby | http://hl7.org/fhir/genomicstudy-dataformat | Goby |
| gwas | http://hl7.org/fhir/genomicstudy-dataformat | GWAS |
| igv | http://hl7.org/fhir/genomicstudy-dataformat | IGV |
| loh | http://hl7.org/fhir/genomicstudy-dataformat | LOH |
| maf-multiple-alignment-format | http://hl7.org/fhir/genomicstudy-dataformat | MAF-Multiple Alignment Format |
| maf-mutation-annotation-format | http://hl7.org/fhir/genomicstudy-dataformat | MAF-Mutation-Annotation-Format |
| merged-bam-file | http://hl7.org/fhir/genomicstudy-dataformat | Merged BAM File |
| mut | http://hl7.org/fhir/genomicstudy-dataformat | MUT |
| narrowpeak | http://hl7.org/fhir/genomicstudy-dataformat | narrowPeak |
| psl | http://hl7.org/fhir/genomicstudy-dataformat | PSL |
| res | http://hl7.org/fhir/genomicstudy-dataformat | RES |
| rna-secondary-structure-formats | http://hl7.org/fhir/genomicstudy-dataformat | RNA-Secondary-Structure-Formats |
| sam | http://hl7.org/fhir/genomicstudy-dataformat | SAM |
| sample-info-attributes-file | http://hl7.org/fhir/genomicstudy-dataformat | Sample-Info-Attributes-file |
| seg | http://hl7.org/fhir/genomicstudy-dataformat | SEG |
| tdf | http://hl7.org/fhir/genomicstudy-dataformat | TDF |
| track-line | http://hl7.org/fhir/genomicstudy-dataformat | Track Line |
| type-line | http://hl7.org/fhir/genomicstudy-dataformat | Type Line |
| vcf | http://hl7.org/fhir/genomicstudy-dataformat | VCF |
| wig | http://hl7.org/fhir/genomicstudy-dataformat | WIG |
Explanation of the columns that may appear on this page:
| Level | A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies |
| System | The source of the definition of the code (when the value set draws in codes defined elsewhere) |
| Code | The code (used as the code in the resource instance) |
| Display | The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application |
| Definition | An explanation of the meaning of the concept |
| Comments | Additional notes about how to use the code |
IG © 2025+ FHIR Infrastructure. Package hl7.fhir.uv.xver-r5.r4#0.0.1-snapshot-2 based on FHIR 4.0.1. Generated 2025-09-13
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