R6 Ballot (1st Draft)

This page is part of the FHIR Specification v6.0.0-ballot1: Release 6 Ballot (1st Draft) (see Ballot Notes). The current version is 5.0.0. For a full list of available versions, see the Directory of published versions

14.12 Resource Citation - Content

Clinical Decision Support icon Work GroupMaturity Level: 1 Trial UseSecurity Category: Business Compartments: No defined compartments

The Citation Resource enables reference to any knowledge artifact for purposes of identification and attribution. The Citation Resource supports existing reference structures and developing publication practices such as versioning, expressing complex contributorship roles, and referencing computable resources.

The scope of the Citation Resource is to describe any aspect of identification, location, authorship, and contributorship to a journal article, report, document, resource, or other knowledge artifact. Citations are used extensively in scholarly communication and important for documenting the evidence or source behind statements of fact, opinion, and interpretation. Citations are also used for acknowledgement of the contributions of individuals and groups to the creation and advancement of knowledge.

Across the academic and scientific community citations are used extensively to reference the knowledge artifacts contributing to current work. For any community searching for reports of research or scholarly publications (such as searching MEDLINE) the citations contain the metadata used for such searches. Standardization of citations supports interoperability across citation managers and adaptation to current needs, such as reports being available on preprint servers before 'final' peer-reviewed published form, need to cite datasets or other alternative forms of expression, or the ability to support citation of FHIR Resources where the FHIR Resource represents research or scholarly publication.

Although citations as a concept are certainly not unique to healthcare, their use within healthcare contexts is ubiquitous, especially as part of the need to cite literature references and scientific knowledge as part of supporting evidence. This need is already manifest in references to the Citation resource from other FHIR resources including ResearchStudy, SubstanceDefinition, and DiagnosticReport. In addition, citations of evidence are a critical aspect of evidence-based medicine and structures to represent citation information are a necessary modeling component in the EBM-on-FHIR project. Without a resource dedicated to this concept, evidence-based medicine concepts and approaches would need to rely on extensions and/or non-FHIR-based solutions to exchange citation information, resulting in more complex and difficult to implement and maintain resource types to support evidence-based medicine.

The Resource can accommodate both human and machine readers. The summary element provides human-readable information.

The Citation Resource has multiple elements containing metadata that describe the citation resource itself, and a citedArtifact element containing metadata that describe the article or artifact being cited.

Attribution of scholarly contributions is expressed in the citedArtifact.contributorship element, which has grown more complex as the nature of authorship and the concerns for credit and acknowledgement are increasingly complex. If an individualized attribution structure is not required, the citedArtifact.contributorship.summary element will do.

"Publication" must now cover books, books series, article series, database registries, database updates, and the like. The element, citedArtifact.publicationForm, enables this description. Within citedArtifact.publicationForm, the publishedIn element identifies the largest container (journal, book, database, or newspaper), the periodicRelease element identifies the periodic issue, and the remaining elements (covering dates, language, and pagination) are specific to the artifact being cited.

Any resource may have common metadata including publisher, authors, reviewers, editors, endorsers, identifiers and location concepts for the resource. The Citation Resource is expected to be used primarily for citing things that are not FHIR Resources. There is NOT an expectation to provide Citations for most FHIR Resources. However, FHIR Resources can be the subject of Citation Resources when there is additional needs beyond common metadata to use the FHIR Resource as the cited source in other contexts or to support scholarly and scientific contribution attribution to the FHIR Resource content.

The Provenance Resource is used to track the contributions to a resource as it occurs, especially for purposes of confirming authenticity and trust. Citation.citedArtifact.contributorship is used to report the attribution of contributions to the cited artifact, especially for purposes of recognition and acknowledgement, but is not directly reporting the data to support authenticity of the contributions.

The DocumentReference Resource is described as a reference to a document of any kind for any purpose. As the DocumentReference Resource was developed for healthcare data exchange it is modeled to support individualized provenance, security, and artifact relationships as often needed in this context. The Citation Resource was developed for the reference to knowledge artifacts commonly used in scientific and scholarly communication so is modeled to support identification, attribution, classification, status tracking, and representation (summary) of the citation.

Approaches to a citation standard external to FHIR are not well suited for integration with FHIR-based approaches to Evidence and related resources. The MEDLINE citation format is widely used but not extensible for many types of knowledge artifacts that may be cited and not open to community development through open standards development methods. The RIS citation format is widely used but is not a singularly maintained standard and multiple implementations using RIS in different ways leads to confusion and inefficiency.

Structure

NameFlagsCard.TypeDescription & Constraintsdoco
.. Citation TUDomainResourceA description of identification, location, or contributorship of a publication (article or artifact)
+ Warning: Name should be usable as an identifier for the module by machine processing applications such as code generation

Elements defined in Ancestors: id, meta, implicitRules, language, text, contained, extension, modifierExtension
Interfaces Implemented: MetadataResource
... url ΣC0..1uriCanonical identifier for this citation record, represented as a globally unique URI
+ Warning: URL should not contain | or # - these characters make processing canonical references problematic
... identifier Σ0..*IdentifierIdentifier for the citation record itself

... version Σ0..1stringBusiness version of the citation record
... versionAlgorithm[x] Σ0..1How to compare versions
Binding: Version Algorithm (Extensible)
.... versionAlgorithmStringstring
.... versionAlgorithmCodingCoding
... name ΣC0..1stringName for this citation record (computer friendly)
... title ΣT0..1stringName for this citation record (human friendly)
... status ?!Σ1..1codedraft | active | retired | unknown
Binding: PublicationStatus (Required)
... experimental Σ0..1booleanFor testing purposes, not real usage
... date Σ0..1dateTimeDate last changed
... publisher ΣT0..1stringThe publisher of the citation record, not the publisher of the article or artifact being cited
... contact Σ0..*ContactDetailContact details for the publisher of the citation record

... description T0..1markdownNatural language description of the citation
... useContext Σ0..*UsageContextThe context that the citation record content is intended to support

... jurisdiction ΣXD0..*CodeableConceptIntended jurisdiction for citation record (if applicable)
Binding: Jurisdiction ValueSet (Extensible)

... purpose T0..1markdownWhy this citation is defined
... copyright T0..1markdownUse and/or publishing restrictions for the citation record, not for the cited artifact
... copyrightLabel T0..1stringCopyright holder and year(s) for the ciation record, not for the cited artifact
... approvalDate 0..1dateWhen the citation record was approved by publisher
... lastReviewDate 0..1dateWhen the citation record was last reviewed by the publisher
... effectivePeriod Σ0..1PeriodWhen the citation record is expected to be used
... author 0..*ContactDetailWho authored the citation record

... editor 0..*ContactDetailWho edited the citation record

... reviewer 0..*ContactDetailWho reviewed the citation record

... endorser 0..*ContactDetailWho endorsed the citation record

... summary 0..*BackboneElementA human-readable display of key concepts to represent the citation

.... style 0..1CodeableConceptFormat for display of the citation summary
Binding: Citation Summary Style (Extensible)
.... text Σ1..1markdownThe human-readable display of the citation summary
... classification 0..*BackboneElementThe assignment to an organizing scheme

.... type 0..1CodeableConceptThe kind of classifier (e.g. publication type, keyword)
Binding: Citation Classification Type (Extensible)
.... classifier 0..*CodeableConceptThe specific classification value
Binding: Citation Artifact Classifier (Example)

... note 0..*AnnotationUsed for general notes and annotations not coded elsewhere

... currentState 0..*CodeableConceptThe status of the citation record
Binding: Citation Status Type (Example)

... statusDate 0..*BackboneElementAn effective date or period for a status of the citation record

.... activity 1..1CodeableConceptClassification of the status
Binding: Citation Status Type (Example)
.... actual 0..1booleanEither occurred or expected
.... period 1..1PeriodWhen the status started and/or ended
... relatedArtifact 0..*RelatedArtifactArtifact related to the citation record

... citedArtifact 0..1BackboneElementThe article or artifact being described
.... identifier Σ0..*IdentifierUnique identifier. May include DOI, PMID, PMCID, etc

.... relatedIdentifier Σ0..*IdentifierIdentifier not unique to the cited artifact. May include trial registry identifiers

.... dateAccessed Σ0..1dateTimeWhen the cited artifact was accessed
.... version 0..1BackboneElementThe defined version of the cited artifact
..... value 1..1stringThe version number or other version identifier
..... baseCitation 0..1Reference(Citation)Citation for the main version of the cited artifact
.... currentState 0..*CodeableConceptThe status of the cited artifact
Binding: Cited Artifact Status Type (Extensible)

.... statusDate 0..*BackboneElementAn effective date or period for a status of the cited artifact

..... activity 1..1CodeableConceptClassification of the status
Binding: Cited Artifact Status Type (Extensible)
..... actual 0..1booleanEither occurred or expected
..... period 1..1PeriodWhen the status started and/or ended
.... title 0..*BackboneElementThe title details of the article or artifact

..... type 0..*CodeableConceptThe kind of title
Binding: Title Type (Extensible)

..... language 0..1CodeableConceptUsed to express the specific language
Binding: Common Languages (Preferred)
..... text 1..1markdownThe title of the article or artifact
.... abstract 0..*BackboneElementSummary of the article or artifact

..... type 0..1CodeableConceptThe kind of abstract
Binding: Cited Artifact Abstract Type (Extensible)
..... language 0..1CodeableConceptUsed to express the specific language
Binding: Common Languages (Preferred)
..... text 1..1markdownAbstract content
..... copyright 0..1markdownCopyright notice for the abstract
.... part 0..1BackboneElementThe component of the article or artifact
..... type 0..1CodeableConceptThe kind of component
Binding: Cited Artifact Part Type (Extensible)
..... value 0..1stringThe specification of the component
..... baseCitation 0..1Reference(Citation)The citation for the full article or artifact
.... relatesTo 0..*BackboneElementThe artifact related to the cited artifact

..... type 1..1codedocumentation | justification | citation | predecessor | successor | derived-from | depends-on | composed-of | part-of | amends | amended-with | appends | appended-with | cites | cited-by | comments-on | comment-in | contains | contained-in | corrects | correction-in | replaces | replaced-with | retracts | retracted-by | signs | similar-to | supports | supported-with | transforms | transformed-into | transformed-with | documents | specification-of | created-with | cite-as | reprint | reprint-of
Binding: Related Artifact Type All (Required)
..... classifier 0..*CodeableConceptAdditional classifiers
Binding: Citation Artifact Classifier (Extensible)

..... label 0..1stringShort label
..... display 0..1stringBrief description of the related artifact
..... citation 0..1markdownBibliographic citation for the artifact
..... document 0..1AttachmentWhat document is being referenced
..... resource 0..1canonical()What artifact is being referenced
..... resourceReference 0..1Reference()What artifact, if not a conformance resource
.... publicationForm 0..*BackboneElementIf multiple, used to represent alternative forms of the article that are not separate citations

..... publishedIn 0..1BackboneElementThe collection the cited article or artifact is published in
...... type 0..1CodeableConceptKind of container (e.g. Periodical, database, or book)
Binding: Published In Type (Extensible)
...... identifier 0..*IdentifierJournal identifiers include ISSN, ISO Abbreviation and NLMuniqueID; Book identifiers include ISBN

...... title 0..1stringName of the database or title of the book or journal
...... publisher 0..1Reference(Organization)Name of or resource describing the publisher
...... publisherLocation 0..1stringGeographic location of the publisher
..... citedMedium 0..1CodeableConceptInternet or Print
Binding: Cited Medium (Extensible)
..... volume 0..1stringVolume number of journal or other collection in which the article is published
..... issue 0..1stringIssue, part or supplement of journal or other collection in which the article is published
..... articleDate 0..1dateTimeThe date the article was added to the database, or the date the article was released
..... publicationDateText 0..1stringText representation of the date on which the issue of the cited artifact was published
..... publicationDateSeason 0..1stringSeason in which the cited artifact was published
..... lastRevisionDate 0..1dateTimeThe date the article was last revised or updated in the database
..... language 0..*CodeableConceptLanguage(s) in which this form of the article is published
Binding: Common Languages (Preferred)

..... accessionNumber 0..1stringEntry number or identifier for inclusion in a database
..... pageString 0..1stringUsed for full display of pagination
..... firstPage 0..1stringUsed for isolated representation of first page
..... lastPage 0..1stringUsed for isolated representation of last page
..... pageCount 0..1stringNumber of pages or screens
..... copyright 0..1markdownCopyright notice for the full article or artifact
.... webLocation 0..*BackboneElementUsed for any URL for the article or artifact cited

..... classifier 0..*CodeableConceptCode the reason for different URLs, e.g. abstract and full-text
Binding: Artifact Url Classifier (Extensible)

..... url 0..1uriThe specific URL
.... classification 0..*BackboneElementThe assignment to an organizing scheme

..... type 0..1CodeableConceptThe kind of classifier (e.g. publication type, keyword)
Binding: Cited Artifact Classification Type (Extensible)
..... classifier 0..*CodeableConceptThe specific classification value
Binding: Citation Artifact Classifier (Example)

..... artifactAssessment 0..*Reference(ArtifactAssessment)Complex or externally created classification

.... contributorship 0..1BackboneElementAttribution of authors and other contributors
..... complete 0..1booleanIndicates if the list includes all authors and/or contributors
..... entry 0..*BackboneElementAn individual entity named as a contributor

...... contributor 1..1Reference(Practitioner | Organization)The identity of the individual contributor
...... forenameInitials 0..1stringFor citation styles that use initials
...... affiliation 0..*Reference(Organization | PractitionerRole)Organizational affiliation

...... contributionType 0..*CodeableConceptThe specific contribution
Binding: Artifact Contribution Type (Extensible)

...... role 0..1CodeableConceptThe role of the contributor (e.g. author, editor, reviewer, funder)
Binding: Contributor Role (Extensible)
...... contributionInstance 0..*BackboneElementContributions with accounting for time or number

....... type 1..1CodeableConceptThe specific contribution
Binding: Artifact Contribution Instance Type (Extensible)
....... time 0..1dateTimeThe time that the contribution was made
...... correspondingContact 0..1booleanWhether the contributor is the corresponding contributor for the role
...... rankingOrder 0..1positiveIntRanked order of contribution
..... summary 0..*BackboneElementUsed to record a display of the author/contributor list without separate data element for each list member

...... type 0..1CodeableConceptSuch as author list, contributorship statement, funding statement, acknowledgements statement, or conflicts of interest statement
Binding: Contributor Summary Type (Extensible)
...... style 0..1CodeableConceptThe format for the display string
Binding: Contributor Summary Style (Extensible)
...... source 0..1CodeableConceptUsed to code the producer or rule for creating the display string
Binding: Contributor Summary Source (Extensible)
...... value 1..1markdownThe display string for the author list, contributor list, or contributorship statement
.... note 0..*AnnotationAny additional information or content for the article or artifact


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See the Extensions for this resource