minimal Common Oncology Data Elements (mCODE) Implementation Guide
2.0.0 - STU 2

This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v2.0.0: STU 2) based on FHIR R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

Example DiagnosticReport: genomics-report-jenny-m

Master HL7 genetic variant reporting panel (Laboratory, Genetics)

SubjectJenny M ?? 1965-01-01 ( Medical Record Number: MRN1234 (USUAL))
When For2018-03-15
Reported2020-03-15T00:00:01Z

Report Details

CodeValueWhen ForReported
Genetic variant assessmentPresent2018-03-15
DNA region of interest panel2018-03-152018-03-15T00:00:01Z

Notes:

Instance: genomics-report-jenny-m
InstanceOf: GenomicsReport
Title: "genomics-report-jenny-m"
Description: "Extended example: example of gene panel report"
Usage: #example
* status = #final
* category[0] = http://terminology.hl7.org/CodeSystem/v2-0074#LAB
* category[+] = http://terminology.hl7.org/CodeSystem/v2-0074#GE
* code = http://loinc.org#81247-9
* subject = Reference(cancer-patient-jenny-m)
* effectiveDateTime = "2018-03-15"
* issued = "2020-03-15T00:00:01+00:00"
* specimen = Reference(genomic-specimen-left-breast-jenny-m)
* result[0] = Reference(genomic-variant-jenny-m)
* result[+] = Reference(genomic-region-studied-jenny-m)