HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm

HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU Ballot 1

This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v0.9.1: STU 1 Ballot 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

GeneticTestVS


<ValueSet xmlns="http://hl7.org/fhir">
  <id value="onco-core-GeneticTestVS"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml">
<p><b>GeneticTestVS ValueSet</b></p>
<p>Value set containing codes representing genetic tests. Currently the best source of codes is the [Genetic Test Registry](http://www.ncbi.nlm.nih.gov/gtr). The user should be aware that the GTR cannot be a sole reliable source since the test data is voluntarily updated and there is no overarching data steward. This value set contains all codes from http://hl7.org/fhir/us/core/ValueSet/us-core-diagnosticreport-lab-codes (namely, the subset of LOINC codes with CLASSTYPE = 1), plus all codes in GTR.

Implementation note: Although only a subset of LOINC codes is formally part of this value set, the value set itself contains all codes in LOINC, because FHIR cannot create an implicitly-defined value set based on LOINC's CLASSTYPE property.

Conformance note: To be conformant to US Core, a LOINC code must be used, if available. Only if there is no suitable code in LOINC may other codes (such as those from GTR) be used.</p>
</div>
  </text>
  <url value="http://hl7.org/fhir/us/mcode/ValueSet/onco-core-GeneticTestVS"/>
  <version value="0.9.1"/>
  <name value="GeneticTestVS"/>
  <title value="GeneticTestVS"/>
  <status value="draft"/>
  <date value="2019-08-01T00:00:00-04:00"/>
  <publisher value="HL7 International Clinical Interoperability Council"/>
  <contact>
    <telecom>
      <system value="url"/>
      <value value="http://www.hl7.org/Special/committees/cic"/>
    </telecom>
  </contact>
  <description
               value="Value set containing codes representing genetic tests. Currently the best source of codes is the [Genetic Test Registry](http://www.ncbi.nlm.nih.gov/gtr). The user should be aware that the GTR cannot be a sole reliable source since the test data is voluntarily updated and there is no overarching data steward. This value set contains all codes from http://hl7.org/fhir/us/core/ValueSet/us-core-diagnosticreport-lab-codes (namely, the subset of LOINC codes with CLASSTYPE = 1), plus all codes in GTR.

Implementation note: Although only a subset of LOINC codes is formally part of this value set, the value set itself contains all codes in LOINC, because FHIR cannot create an implicitly-defined value set based on LOINC&#39;s CLASSTYPE property.

Conformance note: To be conformant to US Core, a LOINC code must be used, if available. Only if there is no suitable code in LOINC may other codes (such as those from GTR) be used."/>
  <compose>
    <include>
      <system value="http://loinc.org"/>
    </include>
    <include>
      <system value="http://www.ncbi.nlm.nih.gov/gtr"/>
    </include>
  </compose>
</ValueSet>