Bundle sde-example-artifact-bundle of type transaction

Entry 1 - fullUrl = urn:uuid:31244296-3e84-4e17-94b1-4159d64e41db

Request:

PUT Library/FHIRHelpers

Resource Library:

Id:	FHIR Helpers
Url:	FHIR Helpers
Version:	4.0.1
Name:	FHIRHelpers
Title:	FHIR Helpers
Status:	draft
Experimental:	true
Type:	system: LibraryType code: logic-library display: Logic Library
Related Artifacts:	Dependencies http://fhir.org/guides/cqf/common/Library/FHIR-ModelInfo|4.0.1
Content: text/cql /* @author: Bryn Rhodes @description: This library defines functions to convert between FHIR data types and CQL system-defined types, as well as functions to support FHIRPath implementation. For more information, see the FHIRHelpers wiki page: https://github.com/cqframework/clinical_quality_language/wiki/FHIRHelpers @allowFluent: true */ library FHIRHelpers version '4.0.1' using FHIR version '4.0.1' define function ToInterval(period FHIR.Period): if period is null then null else if period."start" is null then Interval(period."start".value, period."end".value] else Interval[period."start".value, period."end".value] define function ToCalendarUnit(unit System.String): case unit when 'ms' then 'millisecond' when 's' then 'second' when 'min' then 'minute' when 'h' then 'hour' when 'd' then 'day' when 'wk' then 'week' when 'mo' then 'month' when 'a' then 'year' else unit end define function ToQuantity(quantity FHIR.Quantity): case when quantity is null then null when quantity.value is null then null when quantity.comparator is not null then Message(null, true, 'FHIRHelpers.ToQuantity.ComparatorQuantityNotSupported', 'Error', 'FHIR Quantity value has a comparator and cannot be converted to a System.Quantity value.') when quantity.system is null or quantity.system.value = 'http://unitsofmeasure.org' or quantity.system.value = 'http://hl7.org/fhirpath/CodeSystem/calendar-units' then System.Quantity { value: quantity.value.value, unit: ToCalendarUnit(Coalesce(quantity.code.value, quantity.unit.value, '1')) } else Message(null, true, 'FHIRHelpers.ToQuantity.InvalidFHIRQuantity', 'Error', 'Invalid FHIR Quantity code: ' & quantity.unit.value & ' (' & quantity.system.value & '|' & quantity.code.value & ')') end define function ToQuantityIgnoringComparator(quantity FHIR.Quantity): case when quantity is null then null when quantity.value is null then null when quantity.system is null or quantity.system.value = 'http://unitsofmeasure.org' or quantity.system.value = 'http://hl7.org/fhirpath/CodeSystem/calendar-units' then System.Quantity { value: quantity.value.value, unit: ToCalendarUnit(Coalesce(quantity.code.value, quantity.unit.value, '1')) } else Message(null, true, 'FHIRHelpers.ToQuantity.InvalidFHIRQuantity', 'Error', 'Invalid FHIR Quantity code: ' & quantity.unit.value & ' (' & quantity.system.value & '|' & quantity.code.value & ')') end define function ToInterval(quantity FHIR.Quantity): if quantity is null then null else case quantity.comparator.value when '<' then Interval[ null, ToQuantityIgnoringComparator(quantity) ) when '<=' then Interval[ null, ToQuantityIgnoringComparator(quantity) ] when '>=' then Interval[ ToQuantityIgnoringComparator(quantity), null ] when '>' then Interval( ToQuantityIgnoringComparator(quantity), null ] else Interval[ToQuantity(quantity), ToQuantity(quantity)] end define function ToRatio(ratio FHIR.Ratio): if ratio is null then null else System.Ratio { numerator: ToQuantity(ratio.numerator), denominator: ToQuantity(ratio.denominator) } define function ToInterval(range FHIR.Range): if range is null then null else Interval[ToQuantity(range.low), ToQuantity(range.high)] define function ToCode(coding FHIR.Coding): if coding is null then null else System.Code { code: coding.code.value, system: coding.system.value, version: coding.version.value, display: coding.display.value } define function ToConcept(concept FHIR.CodeableConcept): if concept is null then null else System.Concept { codes: concept.coding C return ToCode(C), display: concept.text.value } define function reference(reference String): if reference is null then null else Reference { reference: string { value: reference } } define function resolve(reference String) returns Resource: external define function resolve(reference Reference) returns Resource: external define function reference(resource Resource) returns Reference: external define function extension(element Element, url String) returns List<Element>: external define function extension(resource Resource, url String) returns List<Element>: external define function hasValue(element Element) returns Boolean: external define function getValue(element Element) returns Any: external define function ofType(identifier String) returns List<Any>: external define function is(identifier String) returns Boolean: external define function as(identifier String) returns Any: external define function elementDefinition(element Element) returns ElementDefinition: external define function slice(element Element, url String, name String) returns List<Element>: external define function checkModifiers(resource Resource) returns Resource: external define function checkModifiers(resource Resource, modifier String) returns Resource: external define function checkModifiers(element Element) returns Element: external define function checkModifiers(element Element, modifier String) returns Element: external define function conformsTo(resource Resource, structure String) returns Boolean: external define function memberOf(code code, valueSet String) returns Boolean: external define function memberOf(coding Coding, valueSet String) returns Boolean: external define function memberOf(concept CodeableConcept, valueSet String) returns Boolean: external define function subsumes(coding Coding, subsumedCoding Coding) returns Boolean: external define function subsumes(concept CodeableConcept, subsumedConcept CodeableConcept) returns Boolean: external define function subsumedBy(coding Coding, subsumingCoding Coding) returns Boolean: external define function subsumedBy(concept CodeableConcept, subsumingConcept CodeableConcept) returns Boolean: external define function htmlChecks(element Element) returns Boolean: external define function ToString(value AccountStatus): value.value define function ToString(value ActionCardinalityBehavior): value.value define function ToString(value ActionConditionKind): value.value define function ToString(value ActionGroupingBehavior): value.value define function ToString(value ActionParticipantType): value.value define function ToString(value ActionPrecheckBehavior): value.value define function ToString(value ActionRelationshipType): value.value define function ToString(value ActionRequiredBehavior): value.value define function ToString(value ActionSelectionBehavior): value.value define function ToString(value ActivityDefinitionKind): value.value define function ToString(value ActivityParticipantType): value.value define function ToString(value AddressType): value.value define function ToString(value AddressUse): value.value define function ToString(value AdministrativeGender): value.value define function ToString(value AdverseEventActuality): value.value define function ToString(value AggregationMode): value.value define function ToString(value AllergyIntoleranceCategory): value.value define function ToString(value AllergyIntoleranceCriticality): value.value define function ToString(value AllergyIntoleranceSeverity): value.value define function ToString(value AllergyIntoleranceType): value.value define function ToString(value AppointmentStatus): value.value define function ToString(value AssertionDirectionType): value.value define function ToString(value AssertionOperatorType): value.value define function ToString(value AssertionResponseTypes): value.value define function ToString(value AuditEventAction): value.value define function ToString(value AuditEventAgentNetworkType): value.value define function ToString(value AuditEventOutcome): value.value define function ToString(value BindingStrength): value.value define function ToString(value BiologicallyDerivedProductCategory): value.value define function ToString(value BiologicallyDerivedProductStatus): value.value define function ToString(value BiologicallyDerivedProductStorageScale): value.value define function ToString(value BundleType): value.value define function ToString(value CapabilityStatementKind): value.value define function ToString(value CarePlanActivityKind): value.value define function ToString(value CarePlanActivityStatus): value.value define function ToString(value CarePlanIntent): value.value define function ToString(value CarePlanStatus): value.value define function ToString(value CareTeamStatus): value.value define function ToString(value CatalogEntryRelationType): value.value define function ToString(value ChargeItemDefinitionPriceComponentType): value.value define function ToString(value ChargeItemStatus): value.value define function ToString(value ClaimResponseStatus): value.value define function ToString(value ClaimStatus): value.value define function ToString(value ClinicalImpressionStatus): value.value define function ToString(value CodeSearchSupport): value.value define function ToString(value CodeSystemContentMode): value.value define function ToString(value CodeSystemHierarchyMeaning): value.value define function ToString(value CommunicationPriority): value.value define function ToString(value CommunicationRequestStatus): value.value define function ToString(value CommunicationStatus): value.value define function ToString(value CompartmentCode): value.value define function ToString(value CompartmentType): value.value define function ToString(value CompositionAttestationMode): value.value define function ToString(value CompositionStatus): value.value define function ToString(value ConceptMapEquivalence): value.value define function ToString(value ConceptMapGroupUnmappedMode): value.value define function ToString(value ConditionalDeleteStatus): value.value define function ToString(value ConditionalReadStatus): value.value define function ToString(value ConsentDataMeaning): value.value define function ToString(value ConsentProvisionType): value.value define function ToString(value ConsentState): value.value define function ToString(value ConstraintSeverity): value.value define function ToString(value ContactPointSystem): value.value define function ToString(value ContactPointUse): value.value define function ToString(value ContractPublicationStatus): value.value define function ToString(value ContractStatus): value.value define function ToString(value ContributorType): value.value define function ToString(value CoverageStatus): value.value define function ToString(value CurrencyCode): value.value define function ToString(value DayOfWeek): value.value define function ToString(value DaysOfWeek): value.value define function ToString(value DetectedIssueSeverity): value.value define function ToString(value DetectedIssueStatus): value.value define function ToString(value DeviceMetricCalibrationState): value.value define function ToString(value DeviceMetricCalibrationType): value.value define function ToString(value DeviceMetricCategory): value.value define function ToString(value DeviceMetricColor): value.value define function ToString(value DeviceMetricOperationalStatus): value.value define function ToString(value DeviceNameType): value.value define function ToString(value DeviceRequestStatus): value.value define function ToString(value DeviceUseStatementStatus): value.value define function ToString(value DiagnosticReportStatus): value.value define function ToString(value DiscriminatorType): value.value define function ToString(value DocumentConfidentiality): value.value define function ToString(value DocumentMode): value.value define function ToString(value DocumentReferenceStatus): value.value define function ToString(value DocumentRelationshipType): value.value define function ToString(value EligibilityRequestPurpose): value.value define function ToString(value EligibilityRequestStatus): value.value define function ToString(value EligibilityResponsePurpose): value.value define function ToString(value EligibilityResponseStatus): value.value define function ToString(value EnableWhenBehavior): value.value define function ToString(value EncounterLocationStatus): value.value define function ToString(value EncounterStatus): value.value define function ToString(value EndpointStatus): value.value define function ToString(value EnrollmentRequestStatus): value.value define function ToString(value EnrollmentResponseStatus): value.value define function ToString(value EpisodeOfCareStatus): value.value define function ToString(value EventCapabilityMode): value.value define function ToString(value EventTiming): value.value define function ToString(value EvidenceVariableType): value.value define function ToString(value ExampleScenarioActorType): value.value define function ToString(value ExplanationOfBenefitStatus): value.value define function ToString(value ExposureState): value.value define function ToString(value ExtensionContextType): value.value define function ToString(value FHIRAllTypes): value.value define function ToString(value FHIRDefinedType): value.value define function ToString(value FHIRDeviceStatus): value.value define function ToString(value FHIRResourceType): value.value define function ToString(value FHIRSubstanceStatus): value.value define function ToString(value FHIRVersion): value.value define function ToString(value FamilyHistoryStatus): value.value define function ToString(value FilterOperator): value.value define function ToString(value FlagStatus): value.value define function ToString(value GoalLifecycleStatus): value.value define function ToString(value GraphCompartmentRule): value.value define function ToString(value GraphCompartmentUse): value.value define function ToString(value GroupMeasure): value.value define function ToString(value GroupType): value.value define function ToString(value GuidanceResponseStatus): value.value define function ToString(value GuidePageGeneration): value.value define function ToString(value GuideParameterCode): value.value define function ToString(value HTTPVerb): value.value define function ToString(value IdentifierUse): value.value define function ToString(value IdentityAssuranceLevel): value.value define function ToString(value ImagingStudyStatus): value.value define function ToString(value ImmunizationEvaluationStatus): value.value define function ToString(value ImmunizationStatus): value.value define function ToString(value InvoicePriceComponentType): value.value define function ToString(value InvoiceStatus): value.value define function ToString(value IssueSeverity): value.value define function ToString(value IssueType): value.value define function ToString(value LinkType): value.value define function ToString(value LinkageType): value.value define function ToString(value ListMode): value.value define function ToString(value ListStatus): value.value define function ToString(value LocationMode): value.value define function ToString(value LocationStatus): value.value define function ToString(value MeasureReportStatus): value.value define function ToString(value MeasureReportType): value.value define function ToString(value MediaStatus): value.value define function ToString(value MedicationAdministrationStatus): value.value define function ToString(value MedicationDispenseStatus): value.value define function ToString(value MedicationKnowledgeStatus): value.value define function ToString(value MedicationRequestIntent): value.value define function ToString(value MedicationRequestPriority): value.value define function ToString(value MedicationRequestStatus): value.value define function ToString(value MedicationStatementStatus): value.value define function ToString(value MedicationStatus): value.value define function ToString(value MessageSignificanceCategory): value.value define function ToString(value Messageheader_Response_Request): value.value define function ToString(value MimeType): value.value define function ToString(value NameUse): value.value define function ToString(value NamingSystemIdentifierType): value.value define function ToString(value NamingSystemType): value.value define function ToString(value NarrativeStatus): value.value define function ToString(value NoteType): value.value define function ToString(value NutritiionOrderIntent): value.value define function ToString(value NutritionOrderStatus): value.value define function ToString(value ObservationDataType): value.value define function ToString(value ObservationRangeCategory): value.value define function ToString(value ObservationStatus): value.value define function ToString(value OperationKind): value.value define function ToString(value OperationParameterUse): value.value define function ToString(value OrientationType): value.value define function ToString(value ParameterUse): value.value define function ToString(value ParticipantRequired): value.value define function ToString(value ParticipantStatus): value.value define function ToString(value ParticipationStatus): value.value define function ToString(value PaymentNoticeStatus): value.value define function ToString(value PaymentReconciliationStatus): value.value define function ToString(value ProcedureStatus): value.value define function ToString(value PropertyRepresentation): value.value define function ToString(value PropertyType): value.value define function ToString(value ProvenanceEntityRole): value.value define function ToString(value PublicationStatus): value.value define function ToString(value QualityType): value.value define function ToString(value QuantityComparator): value.value define function ToString(value QuestionnaireItemOperator): value.value define function ToString(value QuestionnaireItemType): value.value define function ToString(value QuestionnaireResponseStatus): value.value define function ToString(value ReferenceHandlingPolicy): value.value define function ToString(value ReferenceVersionRules): value.value define function ToString(value ReferredDocumentStatus): value.value define function ToString(value RelatedArtifactType): value.value define function ToString(value RemittanceOutcome): value.value define function ToString(value RepositoryType): value.value define function ToString(value RequestIntent): value.value define function ToString(value RequestPriority): value.value define function ToString(value RequestStatus): value.value define function ToString(value ResearchElementType): value.value define function ToString(value ResearchStudyStatus): value.value define function ToString(value ResearchSubjectStatus): value.value define function ToString(value ResourceType): value.value define function ToString(value ResourceVersionPolicy): value.value define function ToString(value ResponseType): value.value define function ToString(value RestfulCapabilityMode): value.value define function ToString(value RiskAssessmentStatus): value.value define function ToString(value SPDXLicense): value.value define function ToString(value SearchComparator): value.value define function ToString(value SearchEntryMode): value.value define function ToString(value SearchModifierCode): value.value define function ToString(value SearchParamType): value.value define function ToString(value SectionMode): value.value define function ToString(value SequenceType): value.value define function ToString(value ServiceRequestIntent): value.value define function ToString(value ServiceRequestPriority): value.value define function ToString(value ServiceRequestStatus): value.value define function ToString(value SlicingRules): value.value define function ToString(value SlotStatus): value.value define function ToString(value SortDirection): value.value define function ToString(value SpecimenContainedPreference): value.value define function ToString(value SpecimenStatus): value.value define function ToString(value Status): value.value define function ToString(value StrandType): value.value define function ToString(value StructureDefinitionKind): value.value define function ToString(value StructureMapContextType): value.value define function ToString(value StructureMapGroupTypeMode): value.value define function ToString(value StructureMapInputMode): value.value define function ToString(value StructureMapModelMode): value.value define function ToString(value StructureMapSourceListMode): value.value define function ToString(value StructureMapTargetListMode): value.value define function ToString(value StructureMapTransform): value.value define function ToString(value SubscriptionChannelType): value.value define function ToString(value SubscriptionStatus): value.value define function ToString(value SupplyDeliveryStatus): value.value define function ToString(value SupplyRequestStatus): value.value define function ToString(value SystemRestfulInteraction): value.value define function ToString(value TaskIntent): value.value define function ToString(value TaskPriority): value.value define function ToString(value TaskStatus): value.value define function ToString(value TestReportActionResult): value.value define function ToString(value TestReportParticipantType): value.value define function ToString(value TestReportResult): value.value define function ToString(value TestReportStatus): value.value define function ToString(value TestScriptRequestMethodCode): value.value define function ToString(value TriggerType): value.value define function ToString(value TypeDerivationRule): value.value define function ToString(value TypeRestfulInteraction): value.value define function ToString(value UDIEntryType): value.value define function ToString(value UnitsOfTime): value.value define function ToString(value Use): value.value define function ToString(value VariableType): value.value define function ToString(value VisionBase): value.value define function ToString(value VisionEyes): value.value define function ToString(value VisionStatus): value.value define function ToString(value XPathUsageType): value.value define function ToString(value base64Binary): value.value define function ToBoolean(value boolean): value.value define function ToDate(value date): value.value define function ToDateTime(value dateTime): value.value define function ToDecimal(value decimal): value.value define function ToDateTime(value instant): value.value define function ToInteger(value integer): value.value define function ToString(value string): value.value define function ToTime(value time): value.value define function ToString(value uri): value.value define function ToString(value xhtml): value.value
Content: application/elm+xml Encoded data (589232 characters)
Content: application/elm+json Encoded data (1071916 characters)

Entry 2 - fullUrl = urn:uuid:aa99c584-12e5-46bb-8b30-ab10cfe26471

Request:

PUT Library/FHIRCommon

Resource Library:

Id:	FHIRCommon
Url:	FHIRCommon
Version:	4.0.1
Name:	FHIRCommon
Title:	FHIRCommon
Status:	draft
Experimental:	true
Type:	system: LibraryType code: logic-library display: Logic Library
Related Artifacts:	Dependencies http://fhir.org/guides/cqf/common/Library/FHIR-ModelInfo|4.0.1 http://fhir.org/guides/cqf/Library/FHIRHelpers|4.0.1 Logical Observation Identifiers, Names and Codes (LOINC) SNOMED CT (all versions) RoleCode Diagnosis Role RequestIntent MedicationRequest Category Codes Condition Clinical Status Codes ConditionVerificationStatus AllergyIntolerance Clinical Status Codes AllergyIntolerance Verification Status CQF Active Condition CQF Inactive Condition
Parameters:	Name Type Min Max In/Out Patient Patient 0 1 out
Data Requirements:	Type Profile MS Code Filter Patient http://hl7.org/fhir/StructureDefinition/Patient
Content: text/cql /* @author: Bryn Rhodes @description: Common terminologies and functions used in FHIR-based CQL artifacts */ library FHIRCommon version '4.0.1' using FHIR version '4.0.1' include FHIRHelpers version '4.0.1' codesystem "LOINC": 'http://loinc.org' codesystem "SNOMEDCT": 'http://snomed.info/sct' codesystem "RoleCode": 'http://terminology.hl7.org/CodeSystem/v3-RoleCode' codesystem "Diagnosis Role": 'http://terminology.hl7.org/CodeSystem/diagnosis-role' codesystem "RequestIntent": 'http://terminology.hl7.org/CodeSystem/request-intent' codesystem "MedicationRequestCategory": 'http://terminology.hl7.org/CodeSystem/medicationrequest-category' codesystem "ConditionClinicalStatusCodes": 'http://terminology.hl7.org/CodeSystem/condition-clinical' codesystem "ConditionVerificationStatusCodes": 'http://terminology.hl7.org/CodeSystem/condition-ver-status' codesystem "AllergyIntoleranceClinicalStatusCodes": 'http://terminology.hl7.org/CodeSystem/allergyintolerance-clinical' codesystem "AllergyIntoleranceVerificationStatusCodes": 'http://terminology.hl7.org/CodeSystem/allergyintolerance-verification' valueset "Active Condition": 'http://fhir.org/guides/cqf/common/ValueSet/active-condition' valueset "Inactive Condition": 'http://fhir.org/guides/cqf/common/ValueSet/inactive-condition' code "Birthdate": '21112-8' from "LOINC" display 'Birth date' code "Dead": '419099009' from "SNOMEDCT" display 'Dead' code "ER": 'ER' from "RoleCode" display 'Emergency room' code "ICU": 'ICU' from "RoleCode" display 'Intensive care unit' code "Billing": 'billing' from "Diagnosis Role" display 'Billing' // Condition Clinical Status Codes - Consider value sets for these code "active": 'active' from "ConditionClinicalStatusCodes" code "recurrence": 'recurrence' from "ConditionClinicalStatusCodes" code "relapse": 'relapse' from "ConditionClinicalStatusCodes" code "inactive": 'inactive' from "ConditionClinicalStatusCodes" code "remission": 'remission' from "ConditionClinicalStatusCodes" code "resolved": 'resolved' from "ConditionClinicalStatusCodes" // Condition Verification Status Codes - Consider value sets for these code "unconfirmed": 'unconfirmed' from ConditionVerificationStatusCodes code "provisional": 'provisional' from ConditionVerificationStatusCodes code "differential": 'differential' from ConditionVerificationStatusCodes code "confirmed": 'confirmed' from ConditionVerificationStatusCodes code "refuted": 'refuted' from ConditionVerificationStatusCodes code "entered-in-error": 'entered-in-error' from ConditionVerificationStatusCodes code "allergy-active": 'active' from "AllergyIntoleranceClinicalStatusCodes" code "allergy-inactive": 'inactive' from "AllergyIntoleranceClinicalStatusCodes" code "allergy-resolved": 'resolved' from "AllergyIntoleranceClinicalStatusCodes" // Allergy/Intolerance Verification Status Codes - Consider value sets for these code "allergy-unconfirmed": 'unconfirmed' from AllergyIntoleranceVerificationStatusCodes code "allergy-confirmed": 'confirmed' from AllergyIntoleranceVerificationStatusCodes code "allergy-refuted": 'refuted' from AllergyIntoleranceVerificationStatusCodes // MedicationRequest Category Codes code "Community": 'community' from "MedicationRequestCategory" display 'Community' code "Discharge": 'discharge' from "MedicationRequestCategory" display 'Discharge' // Diagnosis Role Codes code "AD": 'AD' from "Diagnosis Role" display 'Admission diagnosis' code "DD": 'DD' from "Diagnosis Role" display 'Discharge diagnosis' code "CC": 'CC' from "Diagnosis Role" display 'Chief complaint' code "CM": 'CM' from "Diagnosis Role" display 'Comorbidity diagnosis' code "pre-op": 'pre-op' from "Diagnosis Role" display 'pre-op diagnosis' code "post-op": 'post-op' from "Diagnosis Role" display 'post-op diagnosis' code "billing": 'billing' from "Diagnosis Role" display 'billing diagnosis' context Patient /* @description: Normalizes a value that is a choice of timing-valued types to an equivalent interval @comment: Normalizes a choice type of FHIR.dateTime, FHIR.Period, FHIR.Timing, FHIR.instance, FHIR.string, FHIR.Age, or FHIR.Range types to an equivalent interval. This selection of choice types is a superset of the majority of choice types that are used as possible representations for timing-valued elements in FHIR, allowing this function to be used across any resource. NOTE: Due to the complexity of determining a single interval from a Timing or String type, this function will throw a run-time exception if it is used with a Timing or String. */ define function ToInterval(choice Choice<FHIR.dateTime, FHIR.Period, FHIR.Timing, FHIR.instant, FHIR.string, FHIR.Age, FHIR.Range>): case when choice is FHIR.dateTime then Interval[FHIRHelpers.ToDateTime(choice as FHIR.dateTime), FHIRHelpers.ToDateTime(choice as FHIR.dateTime)] when choice is FHIR.Period then FHIRHelpers.ToInterval(choice as FHIR.Period) when choice is FHIR.instant then Interval[FHIRHelpers.ToDateTime(choice as FHIR.instant), FHIRHelpers.ToDateTime(choice as FHIR.instant)] when choice is FHIR.Age then Interval[FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity(choice as FHIR.Age), FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity(choice as FHIR.Age) + 1 year) when choice is FHIR.Range then Interval[FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity((choice as FHIR.Range).low), FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity((choice as FHIR.Range).high) + 1 year) when choice is FHIR.Timing then Message(null as Interval<DateTime>, true, '1', 'Error', 'Cannot compute a single interval from a Timing type') when choice is FHIR.string then Message(null as Interval<DateTime>, true, '1', 'Error', 'Cannot compute an interval from a String value') else null as Interval<DateTime> end /* @description: Returns an interval representing the normalized Abatement of a given Condition resource. @comment: NOTE: Due to the complexity of determining an interval from a String, this function will throw a run-time exception if used with a Condition instance that has a String as the abatement value. */ define function ToAbatementInterval(condition Condition): if condition.abatement is FHIR.dateTime then Interval[FHIRHelpers.ToDateTime(condition.abatement as FHIR.dateTime), FHIRHelpers.ToDateTime(condition.abatement as FHIR.dateTime)] else if condition.abatement is FHIR.Period then FHIRHelpers.ToInterval(condition.abatement as FHIR.Period) else if condition.abatement is FHIR.string then Message(null as Interval<DateTime>, true, '1', 'Error', 'Cannot compute an interval from a String value') else if condition.abatement is FHIR.Age then Interval[FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity(condition.abatement as FHIR.Age), FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity(condition.abatement as FHIR.Age) + 1 year) else if condition.abatement is FHIR.Range then Interval[FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity((condition.abatement as FHIR.Range).low), FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity((condition.abatement as FHIR.Range).high) + 1 year) else if condition.abatement is FHIR.boolean then Interval[end of ToInterval(condition.onset), condition.recordedDate) else null /* @description: Returns an interval representing the normalized prevalence period of a given Condition resource. @comment: Uses the ToInterval and ToAbatementInterval functions to determine the widest potential interval from onset to abatement as specified in the given Condition. */ define function ToPrevalenceInterval(condition Condition): if condition.clinicalStatus ~ "active" or condition.clinicalStatus ~ "recurrence" or condition.clinicalStatus ~ "relapse" then Interval[start of ToInterval(condition.onset), end of ToAbatementInterval(condition)] else Interval[start of ToInterval(condition.onset), end of ToAbatementInterval(condition)) /* @description: Returns any extensions defined on the given resource with the specified url. @comment: NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info. */ define function Extensions(domainResource DomainResource, url String): domainResource.extension E where E.url = url return E /* @description: Returns the single extension (if present) on the given resource with the specified url. @comment: This function uses singleton from to ensure that a run-time exception is thrown if there is more than one extension on the given resource with the specified url. */ define function Extension(domainResource DomainResource, url String): singleton from "Extensions"(domainResource, url) /* @description: Returns any extensions defined on the given element with the specified url. @comment: NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info. */ define function Extensions(element Element, url String): element.extension E where E.url = url return E /* @description: Returns the single extension (if present) on the given element with the specified url. @comment: This function uses singleton from to ensure that a run-time exception is thrown if there is more than one extension on the given resource with the specified url. */ define function Extension(element Element, url String): singleton from Extensions(element, url) /* @description: Returns any modifier extensions defined on the given resource with the specified url. @comment: NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info. */ define function ModifierExtensions(domainResource DomainResource, url String): domainResource.modifierExtension E where E.url = url return E /* @description: Returns the single modifier extension (if present) on the given resource with the specified url. @comment: This function uses singleton from to ensure that a run-time exception is thrown if there is more than one extension on the given resource with the specified url. */ define function ModifierExtension(domainResource DomainResource, url String): singleton from ModifierExtensions(domainResource, url) /* @description: Returns any modifier extensions defined on the given element with the specified url. @comment: NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info. */ define function ModifierExtensions(element BackboneElement, url String): element.modifierExtension E where E.url = url return E /* @description: Returns the single modifier extension (if present) on the given element with the specified url. @comment: This function uses singleton from to ensure that a run-time exception is thrown if there is more than one extension on the given resource with the specified url. */ define function ModifierExtension(element BackboneElement, url String): singleton from ModifierExtensions(element, url) /* @description: Returns any base-FHIR extensions defined on the given resource with the specified id. @comment: NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info. */ define function BaseExtensions(domainResource DomainResource, id String): domainResource.extension E where E.url = ('http://hl7.org/fhir/StructureDefinition/' + id) return E /* @description: Returns the single base-FHIR extension (if present) on the given resource with the specified id. @comment: This function uses singleton from to ensure that a run-time exception is thrown if there is more than one extension on the given resource with the specified url. */ define function BaseExtension(domainResource DomainResource, id String): singleton from BaseExtensions(domainResource, id) /* @description: Returns any base-FHIR extensions defined on the given element with the specified id. @comment: NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info. */ define function BaseExtensions(element Element, id String): element.extension E where E.url = ('http://hl7.org/fhir/StructureDefinition/' + id) return E /* @description: Returns the single base-FHIR extension (if present) on the given element with the specified id. @comment: This function uses singleton from to ensure that a run-time exception is thrown if there is more than one extension on the given resource with the specified url. */ define function BaseExtension(element Element, id String): singleton from BaseExtensions(element, id) /* @description: Returns any base-FHIR modifier extensions defined on the given resource with the specified id. @comment: NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info. */ define function BaseModifierExtensions(domainResource DomainResource, id String): domainResource.modifierExtension E where E.url = ('http://hl7.org/fhir/StructureDefinition/' + id) return E /* @description: Returns the single base-FHIR modifier extension (if present) on the given resource with the specified id. @comment: This function uses singleton from to ensure that a run-time exception is thrown if there is more than one extension on the given resource with the specified url. */ define function BaseModifierExtension(domainResource DomainResource, id String): singleton from BaseModifierExtensions(domainResource, id) /* @description: Returns any base-FHIR modifier extensions defined on the given element with the specified id. @comment: NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info. */ define function BaseModifierExtensions(element BackboneElement, id String): element.modifierExtension E where E.url = ('http://hl7.org/fhir/StructureDefinition/' + id) return E /* @description: Returns the single base-FHIR extension (if present) on the given element with the specified id. @comment: This function uses singleton from to ensure that a run-time exception is thrown if there is more than one extension on the given resource with the specified url. */ define function BaseModifierExtension(element BackboneElement, id String): singleton from BaseModifierExtensions(element, id)
Content: application/elm+xml Encoded data (291380 characters)
Content: application/elm+json Encoded data (554336 characters)

Entry 3 - fullUrl = urn:uuid:b3463968-f67d-42ef-8494-cd4ea42e87b9

Request:

PUT Library/MATGlobalCommonFunctionsFHIR4

Resource Library:

Id:	MAT Global Common Functions FHIRR4
Url:	MAT Global Common Functions FHIRR4
Version:	6.1.000
Name:	MATGlobalCommonFunctionsFHIR4
Title:	MAT Global Common Functions FHIRR4
Status:	draft
Experimental:	true
Type:	system: LibraryType code: logic-library display: Logic Library
Related Artifacts:	Dependencies http://fhir.org/guides/cqf/common/Library/FHIR-ModelInfo|4.0.1 http://fhir.org/guides/cqf/Library/FHIRHelpers|4.0.1 Condition Clinical Status Codes AllergyIntolerance Clinical Status Codes AllergyIntolerance Verification Status Diagnosis Role Logical Observation Identifiers, Names and Codes (LOINC) MedicationRequest Category Codes ConditionVerificationStatus SNOMED CT (all versions) RoleCode Emergency Department Visit Encounter Inpatient Observation Services
Parameters:	Name Type Min Max In/Out Measurement Period Period 0 1 in Patient Patient 0 1 out Inpatient Encounter Encounter 0 * out
Data Requirements:	Type Profile MS Code Filter Patient http://hl7.org/fhir/StructureDefinition/Patient Encounter http://hl7.org/fhir/StructureDefinition/Encounter ;;; code filter: path: type value set: http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.666.5.307 Encounter http://hl7.org/fhir/StructureDefinition/Encounter ;; code filter: path: type value set: http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1111.143 Encounter http://hl7.org/fhir/StructureDefinition/Encounter ;;; code filter: path: type value set: http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292 Condition http://hl7.org/fhir/StructureDefinition/Condition ; Location http://hl7.org/fhir/StructureDefinition/Location ; Provenance http://hl7.org/fhir/StructureDefinition/Provenance ; code filter: path: target
Content: text/cql library MATGlobalCommonFunctionsFHIR4 version '6.1.000' /*@update: BTR 2020-03-31 -> Incremented version to 5.0.000 Updated FHIR version to 4.0.1 Changed timezone keyword to timezoneoffset for use with CQL 1.4 Removed Normalize Onset in favor of more general Normalize Interval Updated CodeSystems for ConditionVerificationStatusCodes and RoleCodes @update: BTR 2021-05-13 -> Added ActiveCondition Codes and Inactive Condition Codes value sets Added function documentation throughout Fixed EDVisit not using Last Updated prevalence period to use an inclusive boundary if the condition is active Added HasStart, HasEnd, Earliest, and Latest functions Removed ToDate and Age calculation functions @update: BTR 2021-06-25 -> Added GetBaseExtension overloads for Element*/ using FHIR version '4.0.1' include FHIRHelpers version '4.0.1' called FHIRHelpers codesystem "ConditionClinicalStatusCodes": 'http://terminology.hl7.org/CodeSystem/condition-clinical' codesystem "AllergyIntoleranceClinicalStatusCodes": 'http://terminology.hl7.org/CodeSystem/allergyintolerance-clinical' codesystem "AllergyIntoleranceVerificationStatusCodes": 'http://terminology.hl7.org/CodeSystem/allergyintolerance-verification' codesystem "Diagnosis Role": 'http://terminology.hl7.org/CodeSystem/diagnosis-role' codesystem "LOINC": 'http://loinc.org' codesystem "MedicationRequestCategory": 'http://terminology.hl7.org/CodeSystem/medicationrequest-category' codesystem "ConditionVerificationStatusCodes": 'http://terminology.hl7.org/CodeSystem/condition-ver-status' codesystem "SNOMEDCT": 'http://snomed.info/sct' codesystem "RoleCode": 'http://terminology.hl7.org/CodeSystem/v3-RoleCode' valueset "Emergency Department Visit": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292' valueset "Encounter Inpatient": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.666.5.307' valueset "Observation Services": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1111.143' code "active": 'active' from "ConditionClinicalStatusCodes" display 'active' code "allergy-active": 'active' from "AllergyIntoleranceClinicalStatusCodes" display 'allergy-active' code "allergy-confirmed": 'confirmed' from "AllergyIntoleranceVerificationStatusCodes" display 'allergy-confirmed' code "allergy-inactive": 'inactive' from "AllergyIntoleranceClinicalStatusCodes" display 'allergy-inactive' code "allergy-refuted": 'refuted' from "AllergyIntoleranceVerificationStatusCodes" display 'allergy-refuted' code "allergy-resolved": 'resolved' from "AllergyIntoleranceClinicalStatusCodes" display 'allergy-resolved' code "allergy-unconfirmed": 'unconfirmed' from "AllergyIntoleranceVerificationStatusCodes" display 'allergy-unconfirmed' code "Billing": 'billing' from "Diagnosis Role" display 'Billing' code "Birthdate": '21112-8' from "LOINC" display 'Birth date' code "Community": 'community' from "MedicationRequestCategory" display 'Community' code "confirmed": 'confirmed' from "ConditionVerificationStatusCodes" display 'confirmed' code "Dead": '419099009' from "SNOMEDCT" display 'Dead' code "differential": 'differential' from "ConditionVerificationStatusCodes" display 'differential' code "Discharge": 'discharge' from "MedicationRequestCategory" display 'Discharge' code "entered-in-error": 'entered-in-error' from "ConditionVerificationStatusCodes" display 'entered-in-error' code "ER": 'ER' from "RoleCode" display 'Emergency room' code "ICU": 'ICU' from "RoleCode" display 'Intensive care unit' code "inactive": 'inactive' from "ConditionClinicalStatusCodes" display 'inactive' code "provisional": 'provisional' from "ConditionVerificationStatusCodes" display 'provisional' code "recurrence": 'recurrence' from "ConditionClinicalStatusCodes" display 'recurrence' code "refuted": 'refuted' from "ConditionVerificationStatusCodes" display 'refuted' code "relapse": 'relapse' from "ConditionClinicalStatusCodes" display 'relapse' code "remission": 'remission' from "ConditionClinicalStatusCodes" display 'remission' code "resolved": 'resolved' from "ConditionClinicalStatusCodes" display 'resolved' code "unconfirmed": 'unconfirmed' from "ConditionVerificationStatusCodes" display 'unconfirmed' parameter "Measurement Period" Interval<DateTime> default Interval[@2019-01-01T00:00:00.0, @2020-01-01T00:00:00.0) context Patient define "Inpatient Encounter": [Encounter: "Encounter Inpatient"] EncounterInpatient where EncounterInpatient.status = 'finished' and "LengthInDays"(EncounterInpatient.period) <= 120 and EncounterInpatient.period ends during "Measurement Period" /*Calculates the difference in calendar days between the start and end of the given interval.*/ define function "LengthInDays"(Value Interval<DateTime> ): difference in days between start of Value and end of Value /*Returns the most recent emergency department visit, if any, that occurs 1 hour or less prior to the given encounter.*/ define function "ED Visit"(TheEncounter FHIR.Encounter ): Last( [Encounter: "Emergency Department Visit"] EDVisit where EDVisit.status = 'finished' and EDVisit.period ends 1 hour or less on or before start of FHIRHelpers.ToInterval(TheEncounter.period) sort by end of period ) /*Hospitalization returns the total interval for admission to discharge for the given encounter, or for the admission of any immediately prior emergency department visit to the discharge of the given encounter.*/ define function "Hospitalization"(TheEncounter FHIR.Encounter ): ( "ED Visit"(TheEncounter) ) X return if X is null then TheEncounter.period else Interval[start of FHIRHelpers.ToInterval(X.period), end of FHIRHelpers.ToInterval(TheEncounter.period)] /*Returns list of all locations within an encounter, including locations for immediately prior ED visit.*/ define function "Hospitalization Locations"(TheEncounter FHIR.Encounter ): ( "ED Visit"(TheEncounter) ) EDEncounter return if EDEncounter is null then TheEncounter.location else flatten { EDEncounter.location, TheEncounter.location } /*Returns the length of stay in days (i.e. the number of days between admission and discharge) for the given encounter, or from the admission of any immediately prior emergency department visit to the discharge of the encounter*/ define function "Hospitalization Length of Stay"(TheEncounter FHIR.Encounter ): LengthInDays("Hospitalization"(TheEncounter)) /*Returns admission time for an encounter or for immediately prior emergency department visit.*/ define function "Hospital Admission Time"(TheEncounter FHIR.Encounter ): start of "Hospitalization"(TheEncounter) /*Hospital Discharge Time returns the discharge time for an encounter*/ define function "Hospital Discharge Time"(TheEncounter FHIR.Encounter ): end of FHIRHelpers.ToInterval(TheEncounter.period) /*Returns earliest arrival time for an encounter including any prior ED visit.*/ define function "Hospital Arrival Time"(TheEncounter FHIR.Encounter ): start of FHIRHelpers.ToInterval(First( ( "Hospitalization Locations"(TheEncounter) ) HospitalLocation sort by start of FHIRHelpers.ToInterval(period) ).period) // TODO - fix these (must fetch Location resources and compare id to reference) /*Returns the latest departure time for encounter including any prior ED visit. */ /* define function "Hospital Departure Time"(TheEncounter FHIR.Encounter): end of FHIRHelpers.ToInterval(Last( ( "Hospitalization Locations"(TheEncounter) ) HospitalLocation sort by start of FHIRHelpers.ToInterval(period) ).period) define function "Emergency Department Arrival Time"(TheEncounter FHIR.Encounter): start of FHIRHelpers.ToInterval(( singleton from ( ( "Hospitalization Locations"(TheEncounter) ) HospitalLocation where HospitalLocation.type ~ "ER" ) ).period) define function "First Inpatient Intensive Care Unit"(TheEncounter FHIR.Encounter): First( ( TheEncounter.location ) HospitalLocation where HospitalLocation.type ~ "ICU" and HospitalLocation.period during TheEncounter.period sort by start of FHIRHelpers.ToInterval(period) ) */ /*Hospitalization with Observation and Outpatient Surgery Service returns the total interval from the start of any immediately prior emergency department visit, outpatient surgery visit or observation visit to the discharge of the given encounter.*/ /* TODO: define function "HospitalizationWithObservationAndOutpatientSurgeryService"(Encounter "Encounter, Performed" ): Encounter Visit let ObsVisit: Last(["Encounter, Performed": "Observation Services"] LastObs where LastObs.relevantPeriod ends 1 hour or less on or before start of Visit.relevantPeriod sort by end of relevantPeriod ), VisitStart: Coalesce(start of ObsVisit.relevantPeriod, start of Visit.relevantPeriod), EDVisit: Last(["Encounter, Performed": "Emergency Department Visit"] LastED where LastED.relevantPeriod ends 1 hour or less on or before VisitStart sort by end of relevantPeriod ), VisitStartWithED: Coalesce(start of EDVisit.relevantPeriod, VisitStart), OutpatientSurgeryVisit: Last(["Encounter, Performed": "Outpatient Surgery Service"] LastSurgeryOP where LastSurgeryOP.relevantPeriod ends 1 hour or less on or before VisitStartWithED sort by end of relevantPeriod ) return Interval[Coalesce(start of OutpatientSurgeryVisit.relevantPeriod, VisitStartWithED), end of Visit.relevantPeriod] */ /*Hospitalization with Observation returns the total interval from the start of any immediately prior emergency department visit through the observation visit to the discharge of the given encounter*/ define function "HospitalizationWithObservation"(TheEncounter FHIR.Encounter ): TheEncounter Visit let ObsVisit: Last([Encounter: "Observation Services"] LastObs where LastObs.period ends 1 hour or less on or before start of Visit.period sort by end of period ), VisitStart: Coalesce(start of ObsVisit.period, start of Visit.period), EDVisit: Last([Encounter: "Emergency Department Visit"] LastED where LastED.period ends 1 hour or less on or before VisitStart sort by end of period ) return Interval[Coalesce(start of EDVisit.period, VisitStart), end of Visit.period] /** * Normalizes the input argument to an interval representation. * The input can be provided as a dateTime, Period, Timing, instant, string, Age, or Range. * The intent of this function is to provide a clear and concise mechanism to treat single * elements that have multiple possible representations as intervals so that logic doesn't have to account * for the variability. More complex calculations (such as medication request period or dispense period * calculation) need specific guidance and consideration. That guidance may make use of this function, but * the focus of this function is on single element calculations where the semantics are unambiguous. * If the input is a dateTime, the result a DateTime Interval beginning and ending on that dateTime. * If the input is a Period, the result is a DateTime Interval. * If the input is a Timing, an error is raised indicating a single interval cannot be computed from a Timing. * If the input is an instant, the result is a DateTime Interval beginning and ending on that instant. * If the input is a string, an error is raised indicating a single interval cannot be computed from a string. * If the input is an Age, the result is a DateTime Interval beginning when the patient was the given Age, and ending immediately prior to when the patient was the given Age plus one year. * If the input is a Range, the result is a DateTime Interval beginning when the patient was the Age given by the low end of the Range, and ending immediately prior to when the patient was the Age given by the high end of the Range plus one year.*/ define function "Normalize Interval"(choice Choice<FHIR.dateTime, FHIR.Period, FHIR.Timing, FHIR.instant, FHIR.string, FHIR.Age, FHIR.Range> ): case when choice is FHIR.dateTime then Interval[FHIRHelpers.ToDateTime(choice as FHIR.dateTime), FHIRHelpers.ToDateTime(choice as FHIR.dateTime)] when choice is FHIR.Period then FHIRHelpers.ToInterval(choice as FHIR.Period) when choice is FHIR.instant then Interval[FHIRHelpers.ToDateTime(choice as FHIR.instant), FHIRHelpers.ToDateTime(choice as FHIR.instant)] when choice is FHIR.Age then Interval[FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity(choice as FHIR.Age), FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity(choice as FHIR.Age) + 1 year) when choice is FHIR.Range then Interval[FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity((choice as FHIR.Range).low), FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity((choice as FHIR.Range).high) + 1 year) when choice is FHIR.Timing then Message(null as Interval<DateTime>, true, '1', 'Error', 'Cannot compute a single interval from a Timing type') when choice is FHIR.string then Message(null as Interval<DateTime>, true, '1', 'Error', 'Cannot compute an interval from a String value') else null as Interval<DateTime> end /** * Returns an interval representing the abatement of the given condition, if an abatement element is present, null otherwise. This function uses the semantics of Normalize Interval to interpret the abatement element.*/ define function "Normalize Abatement"(condition Condition ): if condition.abatement is FHIR.dateTime then Interval[FHIRHelpers.ToDateTime(condition.abatement as FHIR.dateTime), FHIRHelpers.ToDateTime(condition.abatement as FHIR.dateTime)] else if condition.abatement is FHIR.Period then FHIRHelpers.ToInterval(condition.abatement as FHIR.Period) else if condition.abatement is FHIR.string then Message(null as Interval<DateTime>, true, '1', 'Error', 'Cannot compute an interval from a String value') else if condition.abatement is FHIR.Age then Interval[FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity(condition.abatement as FHIR.Age), FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity(condition.abatement as FHIR.Age) + 1 year) else if condition.abatement is FHIR.Range then Interval[FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity((condition.abatement as FHIR.Range).low), FHIRHelpers.ToDate(Patient.birthDate) + FHIRHelpers.ToQuantity((condition.abatement as FHIR.Range).high) + 1 year) else if condition.abatement is FHIR.boolean then Interval[end of "Normalize Interval"(condition.onset), condition.recordedDate) else null /*Returns an interval representing the period during which the condition was prevalent (i.e. onset to abatement) If the condition is "active", then abatement being unknown would indicate the condition is ongoing, and the ending boundary of the prevalence period is inclusive, otherwise, the abatement is considered unknown and the ending boundary of the prevalence period is exclusive. Note that when using this function it should be noted that many clinical systems do not actually capture abatement, so care should be taken when using this function to meet clinical intent.*/ define function "Prevalence Period"(condition Condition ): if condition.clinicalStatus ~ "active" or condition.clinicalStatus ~ "recurrence" or condition.clinicalStatus ~ "relapse" then Interval[start of "Normalize Interval"(condition.onset), end of "Normalize Abatement"(condition)] else Interval[start of "Normalize Interval"(condition.onset), end of "Normalize Abatement"(condition)) /*Returns the tail of the given uri (i.e. everything after the last slash in the URI).*/ define function "GetId"(uri String ): Last(Split(uri, '/')) /*Returns the Condition resources referenced by the diagnosis element of the Encounter*/ define function "EncounterDiagnosis"(Encounter Encounter ): Encounter.diagnosis D return singleton from ([Condition] C where C.id = "GetId"(D.condition.reference)) // Returns the condition that is specified as the principal diagnosis for the encounter // TODO: BTR 2019-07-30: Shouldn't need the FHIRHelpers reference here, investigate define function "PrincipalDiagnosis"(Encounter Encounter ): (singleton from (Encounter.diagnosis D where FHIRHelpers.ToInteger(D.rank) = 1)) PD return singleton from ([Condition] C where C.id = "GetId"(PD.condition.reference)) // Returns the location for the given location reference /*Returns the Location resource specified by the given reference*/ define function "GetLocation"(reference Reference ): singleton from ( [Location] L where L.id = GetId(reference.reference) ) /*NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info.*/ define function "GetExtensions"(domainResource DomainResource, url String ): domainResource.extension E where E.url = ('http://hl7.org/fhir/us/qicore/StructureDefinition/' + url) return E define function "GetExtension"(domainResource DomainResource, url String ): singleton from "GetExtensions"(domainResource, url) /*NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info.*/ define function "GetExtensions"(element Element, url String ): element.extension E where E.url = (url) return E define function "GetExtension"(element Element, url String ): singleton from "GetExtensions"(element, url) /*NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info.*/ define function "GetBaseExtensions"(domainResource DomainResource, url String ): domainResource.extension E where E.url = ('http://hl7.org/fhir/StructureDefinition/' + url) return E define function "GetBaseExtension"(domainResource DomainResource, url String ): singleton from "GetBaseExtensions"(domainResource, url) /*@description: Returns any base-FHIR extensions defined on the given element with the specified id. @comment: NOTE: Extensions are not the preferred approach, but are used as a way to access content that is defined by extensions but not yet surfaced in the CQL model info.*/ define function "BaseExtensions"(element Element, id String ): element.extension E where E.url = ('http://hl7.org/fhir/StructureDefinition/' + id) return E /*@description: Returns the single base-FHIR extension (if present) on the given element with the specified id. @comment: This function uses singleton from to ensure that a run-time exception is thrown if there is more than one extension on the given resource with the specified url.*/ define function "BaseExtension"(element Element, id String ): singleton from BaseExtensions(element, id) /*NOTE: Provenance is not the preferred approach, this is provided only as an illustration for what using Provenance could look like, and is not a tested pattern*/ define function "GetProvenance"(resource Resource ): singleton from ([Provenance: target in resource.id]) define function "GetMedicationCode"(request MedicationRequest ): if request.medication is CodeableConcept then request.medication as CodeableConcept else (singleton from ([Medication] M where M.id = GetId((request.medication as Reference).reference))).code /*Given an interval, return true if the interval has a starting boundary specified (i.e. the start of the interval is not null and not the minimum DateTime value)*/ define function "HasStart"(period Interval<DateTime> ): not ( start of period is null or start of period = minimum DateTime ) /*Given an interval, return true if the interval has an ending boundary specified (i.e. the end of the interval is not null and not the maximum DateTime value)*/ define function "HasEnd"(period Interval<DateTime> ): not ( end of period is null or end of period = maximum DateTime ) /*Given an interval, return the ending point if the interval has an ending boundary specified, otherwise, return the starting point*/ define function "Latest"(choice Choice<FHIR.dateTime, FHIR.Period, FHIR.Timing, FHIR.instant, FHIR.string, FHIR.Age, FHIR.Range> ): ("Normalize Interval"(choice)) period return if ( HasEnd(period)) then end of period else start of period /*Given an interval, return the starting point if the interval has a starting boundary specified, otherwise, return the ending point*/ define function "Earliest"(choice Choice<FHIR.dateTime, FHIR.Period, FHIR.Timing, FHIR.instant, FHIR.string, FHIR.Age, FHIR.Range> ): ("Normalize Interval"(choice)) period return if (HasStart(period)) then start of period else end of period
Content: application/elm+xml Encoded data (413356 characters)
Content: application/elm+json Encoded data (782204 characters)

Entry 4 - fullUrl = urn:uuid:c6098378-cb38-4ae2-a096-3a3cc5c620d5

Request:

PUT Library/SupplementalDataElementsFHIR4

Resource Library:

Id:	SupplementalDataElementsFHIR4
Url:	SupplementalDataElementsFHIR4
Version:	2.0.000
Name:	SupplementalDataElementsFHIR4
Title:	SupplementalDataElementsFHIR4
Status:	draft
Experimental:	true
Type:	system: LibraryType code: logic-library display: Logic Library
Related Artifacts:	Dependencies http://fhir.org/guides/cqf/common/Library/FHIR-ModelInfo|4.0.1 http://fhir.org/guides/cqf/Library/FHIRHelpers|4.0.1 Ethnicity ONC Administrative Sex Payer Race
Parameters:	Name Type Min Max In/Out Patient Patient 0 1 out SDE Ethnicity Coding 0 * out SDE Payer Resource 0 * out SDE Race Coding 0 * out SDE Sex Coding 0 1 out
Data Requirements:	Type Profile MS Code Filter Patient http://hl7.org/fhir/StructureDefinition/Patient ;;; Coverage http://hl7.org/fhir/StructureDefinition/Coverage ;; code filter: path: type value set: http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.3591
Content: text/cql library SupplementalDataElementsFHIR4 version '2.0.000' /*@update: @@BTR 2020-03-31 -> Incremented version to 2.0.0 Updated FHIR version to 4.0.1 @@@*/ using FHIR version '4.0.1' include FHIRHelpers version '4.0.1' called FHIRHelpers valueset "Ethnicity": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.837' valueset "ONC Administrative Sex": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1' valueset "Payer": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.3591' valueset "Race": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.836' context Patient define "SDE Ethnicity": (flatten ( Patient.extension Extension where Extension.url = 'http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity' return Extension.extension )) E where E.url = 'ombCategory' or E.url = 'detailed' return E.value as Coding define "SDE Payer": [Coverage: type in "Payer"] Payer return { code: Payer.type, period: Payer.period } define "SDE Race": (flatten ( Patient.extension Extension where Extension.url = 'http://hl7.org/fhir/us/core/StructureDefinition/us-core-race' return Extension.extension )) E where E.url = 'ombCategory' or E.url = 'detailed' return E.value as Coding define "SDE Sex": case when Patient.gender = 'male' then Code { code: 'M', system: 'http://hl7.org/fhir/v3/AdministrativeGender', display: 'Male' } when Patient.gender = 'female' then Code { code: 'F', system: 'http://hl7.org/fhir/v3/AdministrativeGender', display: 'Female' } else null end
Content: application/elm+xml Encoded data (42384 characters)
Content: application/elm+json Encoded data (76656 characters)

Entry 5 - fullUrl = urn:uuid:e3b78b9e-96ee-43fb-aeea-22a7681a1538

Request:

PUT Library/NHSNGlycemicControlHypoglycemicInitialPopulation

Resource Library:

Id:	NHSN Glycemic Control, Hypoglycemia Initial Population
Url:	NHSN Glycemic Control Hypoglycemic Initial Population
Version:	0.0.002
Name:	NHSNGlycemicControlHypoglycemicInitialPopulation
Title:	NHSN Glycemic Control Hypoglycemic Initial Population
Status:	draft
Experimental:	true
Type:	system: LibraryType code: logic-library display: Logic Library
Related Artifacts:	Dependencies http://fhir.org/guides/cqf/common/Library/FHIR-ModelInfo|4.0.1 http://fhir.org/guides/cqf/Library/FHIRHelpers|4.0.1 SupplementalDataElementsFHIR4 MAT Global Common Functions FHIRR4 ActCode Diagnosis Role specimenType Observation Category Codes Condition Category Codes Blood Glucose Laboratory and Point of Care Tests http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1046.265 Discharge disposition Antidiabetic Medications Emergency Department Visit Encounter Inpatient Observation Services Payer
Parameters:	Name Type Min Max In/Out Measurement Period Period 0 1 in Patient Patient 0 1 out Inpatient Encounter Encounter 0 * out Patient Hospital Locations Encounter 0 * out Antidiabetic Drugs Administered or Ordered Resource 0 * out Initial Population Encounter 0 * out SDE Chief Complaint Encounter 0 * out SDE Condition Condition 0 * out SDE Condition during Encounter Condition 0 * out SDE Encounter Discharge Dispositions Encounter 0 * out SDE Encounter Locations Encounter 0 * out SDE Medication Administration MedicationAdministration 0 * out SDE Medication Request MedicationRequest 0 * out SDE Blood Glucose Observation Observation 0 * out SDE Payer Resource 0 * out SDE Specimen Specimen 0 * out SDE Minimal Patient Patient 0 1 out SDE Minimal Medication Requests MedicationRequest 0 * out
Data Requirements:	Type Profile MS Code Filter Patient http://hl7.org/fhir/StructureDefinition/Patient Encounter http://hl7.org/fhir/StructureDefinition/Encounter ; code filter: path: class system: ActCode code: IMP display: inpatient encounter system: ActCode code: ACUTE display: inpatient acute system: ActCode code: NONAC display: inpatient non-acute system: ActCode code: SS display: short stay Encounter http://hl7.org/fhir/StructureDefinition/Encounter ;;; code filter: path: type value set: http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.666.5.307 Encounter http://hl7.org/fhir/StructureDefinition/Encounter ;; Encounter http://hl7.org/fhir/StructureDefinition/Encounter ;;; code filter: path: type value set: http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1111.143 Encounter http://hl7.org/fhir/StructureDefinition/Encounter ;;; code filter: path: type value set: http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292 Location http://hl7.org/fhir/StructureDefinition/Location ; Medication http://hl7.org/fhir/StructureDefinition/Medication ; MedicationAdministration http://hl7.org/fhir/StructureDefinition/MedicationAdministration ;;; MedicationRequest http://hl7.org/fhir/StructureDefinition/MedicationRequest ;; Specimen http://hl7.org/fhir/StructureDefinition/Specimen ;;; Condition http://hl7.org/fhir/StructureDefinition/Condition ;; Observation http://hl7.org/fhir/StructureDefinition/Observation ;;;;;; code filter: path: code value set: http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1190.38 Coverage http://hl7.org/fhir/StructureDefinition/Coverage ;; code filter: path: type value set: http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.114222.4.11.3591
Content: text/cql library NHSNGlycemicControlHypoglycemicInitialPopulation version '0.0.002' using FHIR version '4.0.1' include FHIRHelpers version '4.0.1' called FHIRHelpers include SupplementalDataElementsFHIR4 version '2.0.000' called SDE include MATGlobalCommonFunctionsFHIR4 version '6.1.000' called Global codesystem "ActCode": 'http://terminology.hl7.org/CodeSystem/v3-ActCode' codesystem "Diagnosis Role": 'http://terminology.hl7.org/CodeSystem/diagnosis-role' codesystem "Specimen Type": 'http://terminology.hl7.org/CodeSystem/v2-0487' codesystem "Observation Category": 'http://terminology.hl7.org/CodeSystem/observation-category' codesystem "Condition Category": 'http://terminology.hl7.org/CodeSystem/condition-category' valueset "Blood Glucose Laboratory and Point of Care Tests": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1190.38' valueset "Inpatient, Emergency, and Observation Locations": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1046.265' valueset "Discharge Disposition": 'http://terminology.hl7.org/ValueSet/encounter-discharge-disposition' valueset "Antidiabetic Medications": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1190.58' valueset "Emergency Department Visit": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.117.1.7.1.292' valueset "Encounter Inpatient": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113883.3.666.5.307' valueset "Observation Services": 'http://cts.nlm.nih.gov/fhir/ValueSet/2.16.840.1.113762.1.4.1111.143' code "Chief Complaint": 'CC' from "Diagnosis Role" display 'Chief complaint' code "emergency": 'EMER' from "ActCode" display 'emergency' code "inpatient acute": 'ACUTE' from "ActCode" display 'inpatient acute' code "inpatient encounter": 'IMP' from "ActCode" display 'inpatient encounter' code "inpatient non-acute": 'NONAC' from "ActCode" display 'inpatient non-acute' code "observation encounter": 'OBSENC' from "ActCode" display 'observation encounter' code "short stay": 'SS' from "ActCode" display 'short stay' code "laboratory": 'laboratory' from "Observation Category" display 'Laboratory' code "encounter-diagnosis": 'encounter-diagnosis' from "Condition Category" display'encounter-diagnosis' parameter "Measurement Period" Interval<DateTime> default Interval[@2022-01-01T00:00:00.0, @2022-01-31T00:00:00.0) context Patient define "Initial Population": ("Inpatient Encounter" union "Patient Hospital Locations") InpatientEncounters with "Antidiabetic Drugs Administered or Ordered" ADD such that Coalesce(start of Global."Normalize Interval"(ADD.effective), ADD.authoredOn) during "HospitalizationWithObservationOrEmergency"(InpatientEncounters) and Coalesce(start of Global."Normalize Interval"(ADD.effective), ADD.authoredOn) during "Measurement Period" define "Inpatient Encounter": [Encounter: class in {"inpatient encounter", "inpatient acute", "inpatient non-acute", "short stay"}] union [Encounter: "Encounter Inpatient"] Encounters where Encounters.status in {'in-progress', 'finished'} and Encounters.period overlaps "Measurement Period" define "Patient Hospital Locations": [Encounter] Encounters where exists( Encounters.location EncounterLocation where Global.GetLocation(EncounterLocation.location).type in "Inpatient, Emergency, and Observation Locations" and EncounterLocation.period during Encounters.period ) define "Antidiabetic Drugs Administered or Ordered": ([MedicationAdministration] ADDMedAdmin where GetMedicationCode(ADDMedAdmin.medication) in "Antidiabetic Medications" and ADDMedAdmin.status ~ 'completed') union ( [MedicationRequest] MedicationRequests where GetMedicationCode(MedicationRequests.medication) in "Antidiabetic Medications" ) define function "GetMedicationCode"(choice Choice<FHIR.CodeableConcept, FHIR.Reference>): case when choice is FHIR.CodeableConcept then choice as FHIR.CodeableConcept when choice is FHIR.Reference then GetMedication(choice as FHIR.Reference).code else null as FHIR.CodeableConcept end define function "GetMedication"(reference Reference ): singleton from ( [Medication] M where M.id = Global.GetId(reference.reference) ) define function "HospitalizationWithObservationOrEmergency"(TheEncounter FHIR.Encounter ): TheEncounter Visit let ObsVisit: Last([Encounter: "Observation Services"] LastObs where LastObs.class ~ "observation encounter" and LastObs.period ends 1 hour or less on or before start of Visit.period sort by end of period ), VisitStart: Coalesce(start of ObsVisit.period, start of Visit.period), EDVisit: Last([Encounter: "Emergency Department Visit"] LastED where LastED.class ~ "emergency" and LastED.period ends 1 hour or less on or before start of Visit.period sort by end of period ) return Interval[Coalesce(start of EDVisit.period, VisitStart), end of Visit.period] define function "GetSpecimen"(reference Reference): singleton from ( [Specimen] S where S.id = Global.GetId(reference.reference) ) define function "GetPatientExtensions"(domainResource DomainResource): domainResource.extension E where E.url = 'http://hl7.org/fhir/us/core/StructureDefinition/us-core-race' or E.url = 'http://hl7.org/fhir/us/core/StructureDefinition/us-core-ethnicity' or E.url = 'http://hl7.org/fhir/us/core/StructureDefinition/us-core-birthsex' or E.url = 'https://hl7.org/fhir/us/core/StructureDefinition-us-core-genderIdentity' return E define function "GetPatientAddress"(addresses List<FHIR.Address>): addresses address return FHIR.Address{ postalCode: address.postalCode } define function "MedicationRequestResource"(medicationRequest MedicationRequest): medicationRequest m return MedicationRequest{ id: FHIR.id {value: 'new-' + m.id}, medication: GetMedicationCode(m.medication), dosageInstruction: m.dosageInstruction } //Supplement Data Elements define "SDE Chief Complaint": "Initial Population" IP with IP.diagnosis InitialPopulationDiagnosis such that InitialPopulationDiagnosis.use ~ "Chief Complaint" define "SDE Condition": [Condition] Conditions with "Initial Population" InitialPopulation such that Global."Normalize Interval"(Conditions.onset) overlaps InitialPopulation.period define "SDE Condition during Encounter": [Condition] ConditionEncounterDiagnosis with ConditionEncounterDiagnosis.category Category such that Category ~ "encounter-diagnosis" and exists("Initial Population") define "SDE Encounter Discharge Dispositions": "Initial Population" DischargeDispositions where DischargeDispositions.hospitalization.dischargeDisposition in "Discharge Disposition" define "SDE Encounter Locations": "Initial Population" InitialPopulation where exists ( InitialPopulation.location InitialPopulationLocation where (Global.GetLocation(InitialPopulationLocation.location).type in "Inpatient, Emergency, and Observation Locations" and InitialPopulationLocation.period during InitialPopulation.period) ) define "SDE Medication Administration": [MedicationAdministration] MedicationAdministrations with "Initial Population" InitialPopulation such that start of Global."Normalize Interval"(MedicationAdministrations.effective) during "HospitalizationWithObservationOrEmergency"(InitialPopulation) and start of Global."Normalize Interval"(MedicationAdministrations.effective) during "Measurement Period" define "SDE Medication Request": [MedicationRequest] MedicationRequests with "Initial Population" InitialPopulation such that MedicationRequests.authoredOn during "HospitalizationWithObservationOrEmergency"(InitialPopulation) and MedicationRequests.authoredOn during "Measurement Period" define "SDE Blood Glucose Observation": [Observation: "Blood Glucose Laboratory and Point of Care Tests"] Observations with "Initial Population" InitialPopulation such that start of Global."Normalize Interval"(Observations.effective) during InitialPopulation.period or Global."Normalize Interval"(GetSpecimen(Observations.specimen).collection.collected) during InitialPopulation.period with Observations.category category such that category ~ "laboratory" define "SDE Payer": SDE."SDE Payer" Payer with "Initial Population" InitialPopulation such that start of Payer.period before end of InitialPopulation.period define "SDE Specimen": [Specimen] Specimen with "Initial Population" InitialPopulation such that Global."Normalize Interval"(Specimen.collection.collected) during InitialPopulation.period //Change on CQF ruler happened on 8/12. Check to make sure CQF-Ruler version is dated at or after (version 2.0.0). //Wait 2-3 days before the changes are actually applied to the CQF-Ruler. define "SDE Minimal Patient": Patient{ id: Patient.id, extension: GetPatientExtensions(Patient), identifier: Patient.identifier, gender: Patient.gender, birthDate: Patient.birthDate, deceased: Patient.deceased, address: GetPatientAddress(Patient.address) } define "SDE Minimal Medication Requests": [MedicationRequest] MedicationRequests return MedicationRequestResource(MedicationRequests) /*define "SDE Resource Construction Test Inlib": FHIR.Observation { id: FHIR.id { value: 'observation-sdetestinlib-' + ToString(Now()) }, status: FHIR.ObservationStatus { value: 'final' }, code: FHIR.CodeableConcept { coding: { FHIR.Coding { code: FHIR.code { value: 'days-since-appointment' } } } }, subject: FHIR.Reference { reference: FHIR.string { value: Patient.id.value }} //value: FHIR.integer { value: Abs(difference in days between end of SDE."Last Appointment".period and ToDateTime(Today())) } }*/ define "SDE Ethnicity Coding": SDE."SDE Ethnicity" define "SDE Race Coding": SDE."SDE Race"

Entry 6 - fullUrl = urn:uuid:61d3ae55-c7b7-484f-96df-4f3ef8c080c0

Request:

PUT Measure/NHSNGlycemicControlHypoglycemicInitialPopulation

Resource Measure:

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