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10.8.12.17.4 StructureDefinition: MolecularDefinitionVariation - Mappings
Mappings for the variation Profile (see Mappings to Other Standards for further information & status).
10.8.12.18 FiveWs Pattern Mapping (http://hl7.org/fhir/fivews)
MolecularDefinitionVariation |
MolecularDefinition |
|
clinical.diagnostics |
id |
|
|
meta |
|
|
implicitRules |
|
|
language |
|
|
text |
|
|
contained |
|
|
extension |
|
|
modifierExtension |
|
|
identifier |
|
FiveWs.identifier |
type |
|
|
location |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceLocation |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceContext |
|
|
coordinateInterval |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
numberingSystem |
|
|
start[x] |
|
|
end[x] |
|
|
strand |
|
|
cytobandLocation |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
genomeAssembly |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
organism |
|
|
build |
|
|
accession |
|
|
description[x] |
|
|
cytobandInterval |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
chromosome |
|
|
startCytoband |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
arm[x] |
|
|
region[x] |
|
|
band[x] |
|
|
subBand[x] |
|
|
endCytoband |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
arm[x] |
|
|
region[x] |
|
|
band[x] |
|
|
subBand[x] |
|
|
featureLocation |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
geneId |
|
|
representation |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
focus |
|
|
code |
|
|
literal |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
encoding |
|
|
value |
|
|
resolvable |
|
|
extracted |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
startingMolecule |
|
|
start |
|
|
end |
|
|
coordinateSystem |
|
|
reverseComplement |
|
|
repeated |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceMotif |
|
|
copyCount |
|
|
concatenated |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceElement |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequence |
|
|
ordinalIndex |
|
|
relative |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
startingMolecule |
|
|
edit |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
editOrder |
|
|
coordinateSystem |
|
|
start |
|
|
end |
|
|
replacementMolecule |
|
|
replacedMolecule |
|
|
representation |
ContextState |
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
focus |
|
|
code |
|
|
literal |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
encoding |
|
|
value |
|
|
resolvable |
|
|
extracted |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
startingMolecule |
|
|
start |
|
|
end |
|
|
coordinateSystem |
|
|
reverseComplement |
|
|
repeated |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceMotif |
|
|
copyCount |
|
|
concatenated |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceElement |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequence |
|
|
ordinalIndex |
|
|
relative |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
startingMolecule |
|
|
edit |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
editOrder |
|
|
coordinateSystem |
|
|
start |
|
|
end |
|
|
replacementMolecule |
|
|
replacedMolecule |
|
|
representation |
ReferenceState |
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
focus |
|
|
code |
|
|
literal |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
encoding |
|
|
value |
|
|
resolvable |
|
|
extracted |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
startingMolecule |
|
|
start |
|
|
end |
|
|
coordinateSystem |
|
|
reverseComplement |
|
|
repeated |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceMotif |
|
|
copyCount |
|
|
concatenated |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceElement |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequence |
|
|
ordinalIndex |
|
|
relative |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
startingMolecule |
|
|
edit |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
editOrder |
|
|
coordinateSystem |
|
|
start |
|
|
end |
|
|
replacementMolecule |
|
|
replacedMolecule |
|
|
representation |
AlternativeState |
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
focus |
|
|
code |
|
|
literal |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
encoding |
|
|
value |
|
|
resolvable |
|
|
extracted |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
startingMolecule |
|
|
start |
|
|
end |
|
|
coordinateSystem |
|
|
reverseComplement |
|
|
repeated |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceMotif |
|
|
copyCount |
|
|
concatenated |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequenceElement |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
sequence |
|
|
ordinalIndex |
|
|
relative |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
startingMolecule |
|
|
edit |
|
|
id |
|
|
extension |
|
|
modifierExtension |
|
|
editOrder |
|
|
coordinateSystem |
|
|
start |
|
|
end |
|
|
replacementMolecule |
|
|
replacedMolecule |
|
|
10.8.12.19 RIM Mapping (http://hl7.org/v3)
MolecularDefinitionVariation |
MolecularDefinition |
|
Entity, Role, or Act |
id |
|
|
meta |
|
|
implicitRules |
|
|
language |
|
|
text |
|
Act.text? |
contained |
|
N/A |
extension |
|
N/A |
modifierExtension |
|
N/A |
identifier |
|
|
type |
|
|
location |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceLocation |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceContext |
|
|
coordinateInterval |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
numberingSystem |
|
|
start[x] |
|
|
end[x] |
|
|
strand |
|
|
cytobandLocation |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
genomeAssembly |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
organism |
|
|
build |
|
|
accession |
|
|
description[x] |
|
|
cytobandInterval |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
chromosome |
|
|
startCytoband |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
arm[x] |
|
|
region[x] |
|
|
band[x] |
|
|
subBand[x] |
|
|
endCytoband |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
arm[x] |
|
|
region[x] |
|
|
band[x] |
|
|
subBand[x] |
|
|
featureLocation |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
geneId |
|
|
representation |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
focus |
|
|
code |
|
|
literal |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
encoding |
|
|
value |
|
|
resolvable |
|
|
extracted |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
startingMolecule |
|
|
start |
|
|
end |
|
|
coordinateSystem |
|
|
reverseComplement |
|
|
repeated |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceMotif |
|
|
copyCount |
|
|
concatenated |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceElement |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequence |
|
|
ordinalIndex |
|
|
relative |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
startingMolecule |
|
|
edit |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
editOrder |
|
|
coordinateSystem |
|
|
start |
|
|
end |
|
|
replacementMolecule |
|
|
replacedMolecule |
|
|
representation |
ContextState |
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
focus |
|
|
code |
|
|
literal |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
encoding |
|
|
value |
|
|
resolvable |
|
|
extracted |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
startingMolecule |
|
|
start |
|
|
end |
|
|
coordinateSystem |
|
|
reverseComplement |
|
|
repeated |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceMotif |
|
|
copyCount |
|
|
concatenated |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceElement |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequence |
|
|
ordinalIndex |
|
|
relative |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
startingMolecule |
|
|
edit |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
editOrder |
|
|
coordinateSystem |
|
|
start |
|
|
end |
|
|
replacementMolecule |
|
|
replacedMolecule |
|
|
representation |
ReferenceState |
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
focus |
|
|
code |
|
|
literal |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
encoding |
|
|
value |
|
|
resolvable |
|
|
extracted |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
startingMolecule |
|
|
start |
|
|
end |
|
|
coordinateSystem |
|
|
reverseComplement |
|
|
repeated |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceMotif |
|
|
copyCount |
|
|
concatenated |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceElement |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequence |
|
|
ordinalIndex |
|
|
relative |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
startingMolecule |
|
|
edit |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
editOrder |
|
|
coordinateSystem |
|
|
start |
|
|
end |
|
|
replacementMolecule |
|
|
replacedMolecule |
|
|
representation |
AlternativeState |
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
focus |
|
|
code |
|
|
literal |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
encoding |
|
|
value |
|
|
resolvable |
|
|
extracted |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
startingMolecule |
|
|
start |
|
|
end |
|
|
coordinateSystem |
|
|
reverseComplement |
|
|
repeated |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceMotif |
|
|
copyCount |
|
|
concatenated |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequenceElement |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
sequence |
|
|
ordinalIndex |
|
|
relative |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
startingMolecule |
|
|
edit |
|
|
id |
|
n/a |
extension |
|
n/a |
modifierExtension |
|
N/A |
editOrder |
|
|
coordinateSystem |
|
|
start |
|
|
end |
|
|
replacementMolecule |
|
|
replacedMolecule |
|
|