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Orders and Observations Work Group | Maturity Level: 1 | Trial Use | Use Context: Any |
The official URL for this profile is:
http://hl7.org/fhir/StructureDefinition/diagnosticreport-genetics
Describes how the DiagnosticReport resource is used to report structured genetic test results
This profile was published on Fri, Oct 9, 2015 00:00+1100 as a draft by Health Level Seven International (Clinical Genomics).
Description of Profiles, Differentials, Snapshots, and how the XML and JSON presentations work.
This structure is derived from DiagnosticReport.
Summary
Prohibited: 1 element
Extensions
This structure refers to these extensions:
This structure is derived from DiagnosticReport.
Name | Flags | Card. | Type | Description & Constraints |
---|---|---|---|---|
DiagnosticReport | 0..* | DiagnosticReport | A Diagnostic report - a combination of request information, atomic results, images, interpretation, as well as formatted reports | |
DiagnosticReport-geneticsAssessedCondition | 0..* | Reference(Condition) | AssessedCondition URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsAssessedCondition | |
DiagnosticReport-geneticsFamilyMemberHistory | 0..* | Reference(FamilyMemberHistory) | FamilyHistory URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsFamilyMemberHistory | |
DiagnosticReport-geneticsAnalysis | 0..* | (Complex) | Analysis URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsAnalysis | |
DiagnosticReport-geneticsReferences | 0..* | (Complex) | References URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsReferences | |
conclusionCode | 0..0 | |||
Documentation for this format |
Name | Flags | Card. | Type | Description & Constraints |
---|---|---|---|---|
DiagnosticReport | I | 0..* | DiagnosticReport | A Diagnostic report - a combination of request information, atomic results, images, interpretation, as well as formatted reports |
id | Σ | 0..1 | id | Logical id of this artifact |
meta | ΣI | 0..1 | Meta | Metadata about the resource |
implicitRules | ?!ΣI | 0..1 | uri | A set of rules under which this content was created |
language | I | 0..1 | code | Language of the resource content Binding: Common Languages (preferred) Max Binding: All Languages |
text | I | 0..1 | Narrative | Text summary of the resource, for human interpretation |
contained | 0..* | Resource | Contained, inline Resources | |
extension | I | 0..* | Extension | Extension Slice: Unordered, Open by value:url |
DiagnosticReport-geneticsAssessedCondition | I | 0..* | Reference(Condition) | AssessedCondition URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsAssessedCondition |
DiagnosticReport-geneticsFamilyMemberHistory | I | 0..* | Reference(FamilyMemberHistory) | FamilyHistory URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsFamilyMemberHistory |
DiagnosticReport-geneticsAnalysis | I | 0..* | (Complex) | Analysis URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsAnalysis |
DiagnosticReport-geneticsReferences | I | 0..* | (Complex) | References URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsReferences |
modifierExtension | ?!I | 0..* | Extension | Extensions that cannot be ignored |
identifier | ΣI | 0..* | Identifier | Business identifier for report |
basedOn | I | 0..* | Reference(CarePlan | ImmunizationRecommendation | MedicationRequest | NutritionOrder | ServiceRequest) | What was requested |
status | ?!ΣI | 1..1 | code | registered | partial | preliminary | final + Binding: DiagnosticReportStatus (required) |
category | ΣI | 0..* | CodeableConcept | Service category Binding: Diagnostic Service Section Codes (example) |
code | ΣI | 1..1 | CodeableConcept | Name/Code for this diagnostic report Binding: LOINC Diagnostic Report Codes (preferred) |
subject | ΣI | 0..1 | Reference(Patient | Group | Device | Location) | The subject of the report - usually, but not always, the patient |
encounter | ΣI | 0..1 | Reference(Encounter) | Health care event when test ordered |
effective[x] | ΣI | 0..1 | Clinically relevant time/time-period for report | |
effectiveDateTime | dateTime | |||
effectivePeriod | Period | |||
issued | ΣI | 0..1 | instant | DateTime this version was made |
performer | ΣI | 0..* | Reference(Practitioner | PractitionerRole | Organization | CareTeam) | Responsible Diagnostic Service |
resultsInterpreter | ΣI | 0..* | Reference(Practitioner | PractitionerRole | Organization | CareTeam) | Primary result interpreter |
specimen | I | 0..* | Reference(Specimen) | Specimens this report is based on |
result | I | 0..* | Reference(Observation) | Observations |
imagingStudy | I | 0..* | Reference(ImagingStudy) | Reference to full details of imaging associated with the diagnostic report |
media | ΣI | 0..* | BackboneElement | Key images associated with this report |
id | 0..1 | id | Unique id for inter-element referencing | |
extension | I | 0..* | Extension | Additional content defined by implementations |
modifierExtension | ?!ΣI | 0..* | Extension | Extensions that cannot be ignored even if unrecognized |
comment | I | 0..1 | string | Comment about the image (e.g. explanation) |
link | ΣI | 1..1 | Reference(DocumentReference) | Reference to the image source |
conclusion | I | 0..1 | string | Clinical conclusion (interpretation) of test results |
presentedForm | I | 0..* | Attachment | Entire report as issued |
Documentation for this format |
<!-- DiagnosticReport-Genetics --> <DiagnosticReport xmlns="http://hl7.org/fhir" > <!-- from Element: extension --> <id value="[id]"/><!-- 0..1 Logical id of this artifact --> <meta><!-- 0..1 Meta Metadata about the resource --></meta> <implicitRules value="[uri]"/><!-- 0..1 A set of rules under which this content was created --> <language value="[code]"/><!-- 0..1 Language of the resource content --> <text><!-- 0..1 Narrative Text summary of the resource, for human interpretation --></text> <contained><!-- 0..* Resource Contained, inline Resources --></contained> <modifierExtension><!-- 0..* Extension Extensions that cannot be ignored --></modifierExtension> <identifier><!-- 0..* Identifier Business identifier for report --></identifier> <basedOn><!-- 0..* Reference(CarePlan) What was requested --></basedOn> <status value="[code]"/><!-- 1..1 registered | partial | preliminary | final + --> <category><!-- 0..* CodeableConcept Service category --></category> <code><!-- 1..1 CodeableConcept Name/Code for this diagnostic report --></code> <subject><!-- 0..1 Reference(Patient) The subject of the report - usually, but not always, the patient --></subject> <encounter><!-- 0..1 Reference(Encounter) Health care event when test ordered --></encounter> <effective[x]><!-- 0..1 dateTime|Period Clinically relevant time/time-period for report --></effective[x]> <issued value="[instant]"/><!-- 0..1 DateTime this version was made --> <performer><!-- 0..* Reference(Practitioner) Responsible Diagnostic Service --></performer> <resultsInterpreter><!-- 0..* Reference(Practitioner) Primary result interpreter --></resultsInterpreter> <specimen><!-- 0..* Reference(Specimen) Specimens this report is based on --></specimen> <result><!-- 0..* Reference(Observation) Observations --></result> <imagingStudy><!-- 0..* Reference(ImagingStudy) Reference to full details of imaging associated with the diagnostic report --></imagingStudy> <media> 0..* BackboneElement <!-- 0..* Key images associated with this report --> <modifierExtension><!-- 0..* Extension Extensions that cannot be ignored even if unrecognized --></modifierExtension> <comment value="[string]"/><!-- 0..1 Comment about the image (e.g. explanation) --> <link><!-- 1..1 Reference(DocumentReference) Reference to the image source --></link> </media> <conclusion value="[string]"/><!-- 0..1 Clinical conclusion (interpretation) of test results --> <conclusionCode><!-- 0..0 CodeableConcept Codes for the clinical conclusion of test results --></conclusionCode> <presentedForm><!-- 0..* Attachment Entire report as issued --></presentedForm> </DiagnosticReport>
{ // DiagnosticReport-Genetics // from Element: extension "meta" : { Meta }, // C?Metadata about the resource "implicitRules" : "<uri>", // C?A set of rules under which this content was created "language" : "<code>", // C?Language of the resource content "text" : { Narrative }, // C?Text summary of the resource, for human interpretation "contained" : [{ Resource }], //Contained, inline Resources "extension" : [ // sliced by value:url in the specified order, Open { // AssessedCondition // C? // from Element: extension }, { // FamilyHistory // C? // from Element: extension }, { // Analysis // C? // from Element: extension }, { // References // C? // from Element: extension } ], "modifierExtension" : [{ Extension }], // C?Extensions that cannot be ignored "identifier" : [{ Identifier }], // C?Business identifier for report "basedOn" : [{ Reference(CarePlan) }], // C?What was requested "status" : "<code>", // C? R! registered | partial | preliminary | final + "category" : [{ CodeableConcept }], // C?Service category "code" : { CodeableConcept }, // C? R! Name/Code for this diagnostic report "subject" : { Reference(Patient) }, // C?The subject of the report - usually, but not always, the patient "encounter" : { Reference(Encounter) }, // C?Health care event when test ordered // value[x]: Clinically relevant time/time-period for report. One of these 2: "effectiveDateTime" : "<dateTime>", // C?Clinically relevant time/time-period for report "effectivePeriod" : { Period }, // C?Clinically relevant time/time-period for report "issued" : "<instant>", // C?DateTime this version was made "performer" : [{ Reference(Practitioner) }], // C?Responsible Diagnostic Service "resultsInterpreter" : [{ Reference(Practitioner) }], // C?Primary result interpreter "specimen" : [{ Reference(Specimen) }], // C?Specimens this report is based on "result" : [{ Reference(Observation) }], // C?Observations "imagingStudy" : [{ Reference(ImagingStudy) }], // C?Reference to full details of imaging associated with the diagnostic report "media" : [{ BackboneElement }], // C?Key images associated with this report "conclusion" : "<string>", // C?Clinical conclusion (interpretation) of test results "presentedForm" : [{ Attachment }], // C?Entire report as issued }
This structure is derived from DiagnosticReport.
Summary
Prohibited: 1 element
Extensions
This structure refers to these extensions:
Differential View
This structure is derived from DiagnosticReport.
Name | Flags | Card. | Type | Description & Constraints |
---|---|---|---|---|
DiagnosticReport | 0..* | DiagnosticReport | A Diagnostic report - a combination of request information, atomic results, images, interpretation, as well as formatted reports | |
DiagnosticReport-geneticsAssessedCondition | 0..* | Reference(Condition) | AssessedCondition URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsAssessedCondition | |
DiagnosticReport-geneticsFamilyMemberHistory | 0..* | Reference(FamilyMemberHistory) | FamilyHistory URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsFamilyMemberHistory | |
DiagnosticReport-geneticsAnalysis | 0..* | (Complex) | Analysis URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsAnalysis | |
DiagnosticReport-geneticsReferences | 0..* | (Complex) | References URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsReferences | |
conclusionCode | 0..0 | |||
Documentation for this format |
Snapshot View
Name | Flags | Card. | Type | Description & Constraints |
---|---|---|---|---|
DiagnosticReport | I | 0..* | DiagnosticReport | A Diagnostic report - a combination of request information, atomic results, images, interpretation, as well as formatted reports |
id | Σ | 0..1 | id | Logical id of this artifact |
meta | ΣI | 0..1 | Meta | Metadata about the resource |
implicitRules | ?!ΣI | 0..1 | uri | A set of rules under which this content was created |
language | I | 0..1 | code | Language of the resource content Binding: Common Languages (preferred) Max Binding: All Languages |
text | I | 0..1 | Narrative | Text summary of the resource, for human interpretation |
contained | 0..* | Resource | Contained, inline Resources | |
extension | I | 0..* | Extension | Extension Slice: Unordered, Open by value:url |
DiagnosticReport-geneticsAssessedCondition | I | 0..* | Reference(Condition) | AssessedCondition URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsAssessedCondition |
DiagnosticReport-geneticsFamilyMemberHistory | I | 0..* | Reference(FamilyMemberHistory) | FamilyHistory URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsFamilyMemberHistory |
DiagnosticReport-geneticsAnalysis | I | 0..* | (Complex) | Analysis URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsAnalysis |
DiagnosticReport-geneticsReferences | I | 0..* | (Complex) | References URL: http://hl7.org/fhir/StructureDefinition/DiagnosticReport-geneticsReferences |
modifierExtension | ?!I | 0..* | Extension | Extensions that cannot be ignored |
identifier | ΣI | 0..* | Identifier | Business identifier for report |
basedOn | I | 0..* | Reference(CarePlan | ImmunizationRecommendation | MedicationRequest | NutritionOrder | ServiceRequest) | What was requested |
status | ?!ΣI | 1..1 | code | registered | partial | preliminary | final + Binding: DiagnosticReportStatus (required) |
category | ΣI | 0..* | CodeableConcept | Service category Binding: Diagnostic Service Section Codes (example) |
code | ΣI | 1..1 | CodeableConcept | Name/Code for this diagnostic report Binding: LOINC Diagnostic Report Codes (preferred) |
subject | ΣI | 0..1 | Reference(Patient | Group | Device | Location) | The subject of the report - usually, but not always, the patient |
encounter | ΣI | 0..1 | Reference(Encounter) | Health care event when test ordered |
effective[x] | ΣI | 0..1 | Clinically relevant time/time-period for report | |
effectiveDateTime | dateTime | |||
effectivePeriod | Period | |||
issued | ΣI | 0..1 | instant | DateTime this version was made |
performer | ΣI | 0..* | Reference(Practitioner | PractitionerRole | Organization | CareTeam) | Responsible Diagnostic Service |
resultsInterpreter | ΣI | 0..* | Reference(Practitioner | PractitionerRole | Organization | CareTeam) | Primary result interpreter |
specimen | I | 0..* | Reference(Specimen) | Specimens this report is based on |
result | I | 0..* | Reference(Observation) | Observations |
imagingStudy | I | 0..* | Reference(ImagingStudy) | Reference to full details of imaging associated with the diagnostic report |
media | ΣI | 0..* | BackboneElement | Key images associated with this report |
id | 0..1 | id | Unique id for inter-element referencing | |
extension | I | 0..* | Extension | Additional content defined by implementations |
modifierExtension | ?!ΣI | 0..* | Extension | Extensions that cannot be ignored even if unrecognized |
comment | I | 0..1 | string | Comment about the image (e.g. explanation) |
link | ΣI | 1..1 | Reference(DocumentReference) | Reference to the image source |
conclusion | I | 0..1 | string | Clinical conclusion (interpretation) of test results |
presentedForm | I | 0..* | Attachment | Entire report as issued |
Documentation for this format |
XML Template
<!-- DiagnosticReport-Genetics --> <DiagnosticReport xmlns="http://hl7.org/fhir" > <!-- from Element: extension --> <id value="[id]"/><!-- 0..1 Logical id of this artifact --> <meta><!-- 0..1 Meta Metadata about the resource --></meta> <implicitRules value="[uri]"/><!-- 0..1 A set of rules under which this content was created --> <language value="[code]"/><!-- 0..1 Language of the resource content --> <text><!-- 0..1 Narrative Text summary of the resource, for human interpretation --></text> <contained><!-- 0..* Resource Contained, inline Resources --></contained> <modifierExtension><!-- 0..* Extension Extensions that cannot be ignored --></modifierExtension> <identifier><!-- 0..* Identifier Business identifier for report --></identifier> <basedOn><!-- 0..* Reference(CarePlan) What was requested --></basedOn> <status value="[code]"/><!-- 1..1 registered | partial | preliminary | final + --> <category><!-- 0..* CodeableConcept Service category --></category> <code><!-- 1..1 CodeableConcept Name/Code for this diagnostic report --></code> <subject><!-- 0..1 Reference(Patient) The subject of the report - usually, but not always, the patient --></subject> <encounter><!-- 0..1 Reference(Encounter) Health care event when test ordered --></encounter> <effective[x]><!-- 0..1 dateTime|Period Clinically relevant time/time-period for report --></effective[x]> <issued value="[instant]"/><!-- 0..1 DateTime this version was made --> <performer><!-- 0..* Reference(Practitioner) Responsible Diagnostic Service --></performer> <resultsInterpreter><!-- 0..* Reference(Practitioner) Primary result interpreter --></resultsInterpreter> <specimen><!-- 0..* Reference(Specimen) Specimens this report is based on --></specimen> <result><!-- 0..* Reference(Observation) Observations --></result> <imagingStudy><!-- 0..* Reference(ImagingStudy) Reference to full details of imaging associated with the diagnostic report --></imagingStudy> <media> 0..* BackboneElement <!-- 0..* Key images associated with this report --> <modifierExtension><!-- 0..* Extension Extensions that cannot be ignored even if unrecognized --></modifierExtension> <comment value="[string]"/><!-- 0..1 Comment about the image (e.g. explanation) --> <link><!-- 1..1 Reference(DocumentReference) Reference to the image source --></link> </media> <conclusion value="[string]"/><!-- 0..1 Clinical conclusion (interpretation) of test results --> <conclusionCode><!-- 0..0 CodeableConcept Codes for the clinical conclusion of test results --></conclusionCode> <presentedForm><!-- 0..* Attachment Entire report as issued --></presentedForm> </DiagnosticReport>
JSON Template
{ // DiagnosticReport-Genetics // from Element: extension "meta" : { Meta }, // C?Metadata about the resource "implicitRules" : "<uri>", // C?A set of rules under which this content was created "language" : "<code>", // C?Language of the resource content "text" : { Narrative }, // C?Text summary of the resource, for human interpretation "contained" : [{ Resource }], //Contained, inline Resources "extension" : [ // sliced by value:url in the specified order, Open { // AssessedCondition // C? // from Element: extension }, { // FamilyHistory // C? // from Element: extension }, { // Analysis // C? // from Element: extension }, { // References // C? // from Element: extension } ], "modifierExtension" : [{ Extension }], // C?Extensions that cannot be ignored "identifier" : [{ Identifier }], // C?Business identifier for report "basedOn" : [{ Reference(CarePlan) }], // C?What was requested "status" : "<code>", // C? R! registered | partial | preliminary | final + "category" : [{ CodeableConcept }], // C?Service category "code" : { CodeableConcept }, // C? R! Name/Code for this diagnostic report "subject" : { Reference(Patient) }, // C?The subject of the report - usually, but not always, the patient "encounter" : { Reference(Encounter) }, // C?Health care event when test ordered // value[x]: Clinically relevant time/time-period for report. One of these 2: "effectiveDateTime" : "<dateTime>", // C?Clinically relevant time/time-period for report "effectivePeriod" : { Period }, // C?Clinically relevant time/time-period for report "issued" : "<instant>", // C?DateTime this version was made "performer" : [{ Reference(Practitioner) }], // C?Responsible Diagnostic Service "resultsInterpreter" : [{ Reference(Practitioner) }], // C?Primary result interpreter "specimen" : [{ Reference(Specimen) }], // C?Specimens this report is based on "result" : [{ Reference(Observation) }], // C?Observations "imagingStudy" : [{ Reference(ImagingStudy) }], // C?Reference to full details of imaging associated with the diagnostic report "media" : [{ BackboneElement }], // C?Key images associated with this report "conclusion" : "<string>", // C?Clinical conclusion (interpretation) of test results "presentedForm" : [{ Attachment }], // C?Entire report as issued }
Alternate definitions: Master Definition (XML, JSON), Schematron
Path | Name | Conformance | ValueSet |
DiagnosticReport.language | Common Languages | preferred | Common Languages |
DiagnosticReport.status | DiagnosticReportStatus | required | DiagnosticReportStatus |
DiagnosticReport.category | Diagnostic Service Section Codes | example | Diagnostic Service Section Codes |
DiagnosticReport.code | LOINC Diagnostic Report Codes | preferred | LOINC Diagnostic Report Codes |