STU3 Candidate

This page is part of the FHIR Specification (v1.8.0: STU 3 Draft). The current version which supercedes this version is 5.0.0. For a full list of available versions, see the Directory of published versions . Page versions: R4 R3

4.2.11.471 Code System http://hl7.org/fhir/variant-state

This is a value set defined by the FHIR project.

Summary

Defining URL:http://hl7.org/fhir/variant-state
Name:sequenceStatus
Definition:Codes providing the status of the variant test result
Committee:Clinical Genomics Work Group
OID:2.16.840.1.113883.4.642.1.471 (for OID based terminology systems)
Source ResourceXML / JSON

This Code system is used in the following value sets:

  • sequenceStatus (Codes providing the status of the variant test result)

4.2.11.471.1 Content

4.2.11.471.2 sequenceStatus

Codes providing the status of the variant test result

This code system http://hl7.org/fhir/variant-state defines the following codes:

CodeDisplayDefinition
positive positivethe variant is detected
negative negativeno variant is detected
absent absentresult of the variant is missing

 

See the full registry of value sets defined as part of FHIR.

Explanation of the columns that may appear on this page:

LevelA few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
SourceThe source of the definition of the code (when the value set draws in codes defined elsewhere)
CodeThe code (used as the code in the resource instance)
DisplayThe display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
DefinitionAn explanation of the meaning of the concept
CommentsAdditional notes about how to use the code