This page is part of the FHIR Specification (v1.6.0: STU 3 Ballot 4). The current version which supercedes this version is 5.0.0. For a full list of available versions, see the Directory of published versions . Page versions: R5 R4B R4 R3 R2
An example of a complex Micro Isolate and Sensitivities
{ "resourceType": "DiagnosticReport", "id": "micro", "text": { "status": "generated", "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: micro</p><p><b>contained</b>: , , , , , , , , , , , , , , , , , , , , , , , , , </p><p><b>identifier</b>: 290741144</p><p><b>status</b>: final</p><p><b>category</b>: Microbiology <span>(Details : {http://hl7.org/fhir/v2/0074 code 'MB' = 'Microbiology)</span></p><p><b>code</b>: Culture, MRSA <span>(Details : {LOINC code '632-0' = 'Bacteria identified in Wound by Aerobe culture)</span></p><p><b>subject</b>: <a>Patient/example</a></p><p><b>effective</b>: 07/08/2009 7:00:00 PM</p><p><b>issued</b>: 10/08/2009 8:25:44 AM</p><p><b>performer</b>: Todd Ashby</p><p><b>request</b>: id: req; 255337816; Original Order <span>(Details : {http://hl7.org/fhir/request-stage code 'original-order' = 'Original Order)</span>; Culture, MRSA <span>(Details : {LOINC code '632-0' = 'Bacteria identified in Wound by Aerobe culture)</span>; ????</p><p><b>result</b>: id: org1; status: final; Staphylococcus aureus Panel <span>(Details : {http://acme.org/lab/codes/organisms code 'Staaur' = '??)</span>; ????</p></div>" }, "contained": [ { "resourceType": "Observation", "id": "obx1-4", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "ORGANISM" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueCodeableConcept": { "coding": [ { "system": "http://acme.org/lab/codes/organisms", "code": "Staaur" } ], "text": "Staphylococcus aureus" } }, { "resourceType": "Observation", "id": "obx1-5", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "CULTPOSNEG" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueCodeableConcept": { "coding": [ { "system": "http://acme.org/lab/codes/flags", "code": "POS" } ] } }, { "resourceType": "Observation", "id": "obx2-1", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60504", "display": "Ampicillin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "R" } ] } }, { "resourceType": "Observation", "id": "obx2-2", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60512", "display": "Cefazolin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 2, "comparator": "<=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-4", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60516", "display": "Cefoxitin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 4, "comparator": "<=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-6", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60527", "display": "Clindamycin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 0.5, "comparator": ">=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-8", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "61203", "display": "Daptomycin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 1, "comparator": ">=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-10", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60532", "display": "Doxycycline" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 0.5, "comparator": "<=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-12", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60533", "display": "Erythromycin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 8, "comparator": ">=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "R" } ] } }, { "resourceType": "Observation", "id": "obx2-14", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60536", "display": "Gentamicin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 2, "comparator": "<=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-16", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "61007", "display": "Levofloxacin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 0.5, "comparator": "<=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-18", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60699", "display": "Linezolid" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 4 }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-20", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "61204", "display": "Moxifloxacin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 0.5, "comparator": "<=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-22", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60551", "display": "Oxacillin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 0.5 }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-24", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60552", "display": "Penicillin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 2, "comparator": ">=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "R" } ] } }, { "resourceType": "Observation", "id": "obx2-26", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60697", "display": "Quinupristin/Dalfopristin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 0.5 }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-28", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60555", "display": "Rifampin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 0.5, "comparator": "<=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-30", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60558", "display": "Tetracycline" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 0.5, "comparator": "<=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-32", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60561", "display": "Trimethoprim/Sulfamethoxazole" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 0.0526, "comparator": "<=" }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obx2-34", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60563", "display": "Vancomycin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueQuantity": { "value": 1 }, "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "nte-1", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "2099930", "display": "D-Test" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "valueString": "D-Test: Negative - This isolate does not demonstrate inducible clindamycin resistance in vitro." }, { "resourceType": "Observation", "id": "obx3-1", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/tests", "code": "60036", "display": "Oxacillin" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "interpretation": { "coding": [ { "system": "http://hl7.org/fhir/v2/0078", "code": "S" } ] } }, { "resourceType": "Observation", "id": "obr-2", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/panels", "code": "60790", "display": "Susceptibility - Automated broth dilution (Billed)" } ] }, "subject": { "reference": "Patient/example" }, "performer": [ { "display": "Todd Ashby" } ], "related": [ { "type": "has-member", "target": { "reference": "#obx2-1" } }, { "type": "has-member", "target": { "reference": "#obx2-2" } }, { "type": "has-member", "target": { "reference": "#obx2-4" } }, { "type": "has-member", "target": { "reference": "#obx2-6" } }, { "type": "has-member", "target": { "reference": "#obx2-8" } }, { "type": "has-member", "target": { "reference": "#obx2-10" } }, { "type": "has-member", "target": { "reference": "#obx2-12" } }, { "type": "has-member", "target": { "reference": "#obx2-14" } }, { "type": "has-member", "target": { "reference": "#obx2-16" } }, { "type": "has-member", "target": { "reference": "#obx2-18" } }, { "type": "has-member", "target": { "reference": "#obx2-20" } }, { "type": "has-member", "target": { "reference": "#obx2-22" } }, { "type": "has-member", "target": { "reference": "#obx2-24" } }, { "type": "has-member", "target": { "reference": "#obx2-26" } }, { "type": "has-member", "target": { "reference": "#obx2-28" } }, { "type": "has-member", "target": { "reference": "#obx2-30" } }, { "type": "has-member", "target": { "reference": "#obx2-32" } }, { "type": "has-member", "target": { "reference": "#obx2-34" } }, { "type": "has-member", "target": { "reference": "#nte-1" } } ] }, { "resourceType": "Observation", "id": "obr-3", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/panels", "code": "60418", "display": "Susceptibility - Disk diffusion (Billed)" } ] }, "subject": { "reference": "Patient/example" }, "related": [ { "type": "has-member", "target": { "reference": "#obx3-1" } } ] }, { "resourceType": "Observation", "id": "org1", "status": "final", "code": { "coding": [ { "system": "http://acme.org/lab/codes/organisms", "code": "Staaur" } ], "text": "Staphylococcus aureus Panel" }, "subject": { "reference": "Patient/example" }, "related": [ { "type": "has-member", "target": { "reference": "#obx1-4" } }, { "type": "has-member", "target": { "reference": "#obx1-5" } }, { "type": "has-member", "target": { "reference": "#obr-2" } }, { "type": "has-member", "target": { "reference": "#obr-3" } } ] }, { "resourceType": "DiagnosticRequest", "id": "req", "identifier": [ { "value": "255337816" } ], "stage": { "coding": [ { "system": "http://hl7.org/fhir/request-stage", "code": "original-order" } ] }, "code": { "coding": [ { "system": "http://loinc.org", "code": "632-0" } ], "text": "Culture, MRSA" }, "subject": { "reference": "Patient/example" } } ], "identifier": [ { "system": "http://hnam.org/identifiers/orders", "value": "290741144" } ], "status": "final", "category": { "coding": [ { "system": "http://hl7.org/fhir/v2/0074", "code": "MB" } ] }, "code": { "coding": [ { "system": "http://loinc.org", "code": "632-0" } ], "text": "Culture, MRSA" }, "subject": { "reference": "Patient/example" }, "effectiveDateTime": "2009-08-07T19:00:00+10:00", "issued": "2009-08-10T08:25:44+10:00", "performer": [ { "display": "Todd Ashby" } ], "request": [ { "reference": "#req" } ], "result": [ { "reference": "#org1" } ] }
Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.