This page is part of the FHIR Specification (v1.4.0: STU 3 Ballot 3). The current version which supercedes this version is 5.0.0. For a full list of available versions, see the Directory of published versions
Definitions for the uslab-obscode Profile.
Observation(USLab-ObsCode) | |
Definition | US Realm laboratory result using CodeableConcept Data Type for non-numeric results. Laboratory results to ordering providers in the ambulatory care setting and "reportable" laboratory test results to local public health agencies. |
Control | 0..* |
Type | Observation |
Alternate Names | Vital Signs, Measurement, Results, Tests, Obs |
Comments | Used for simple observations such as device measurements, laboratory atomic results, vital signs, height, weight, smoking status, comments, etc. Other resources are used to provide context for observations such as lab reports, etc. |
Invariants | Defined on this element obs-6: dataAbsentReason SHALL only be present if Observation.value[x] is not present (xpath: not(exists(f:dataAbsentReason)) or (not(exists(*[starts-with(local-name(.), 'value')])))) obs-7: Component code SHALL not be same as observation code (xpath: not(exists(f:component/f:code)) or count(for $coding in f:code/f:coding return parent::*/f:component/f:code/f:coding[f:code/@value=$coding/f:code/@value and f:system/@value=$coding/f:system/@value])=0) |
Observation.id | |
Definition | The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes. |
Control | 0..1 |
Type | id |
Comments | The only time that a resource does not have an id is when it is being submitted to the server using a create operation. Bundles always have an id, though it is usually a generated UUID. |
Observation.meta | |
Definition | The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content may not always be associated with version changes to the resource. |
Control | 0..1 |
Type | Meta |
Observation.implicitRules | |
Definition | A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. |
Control | 0..1 |
Type | uri |
Is Modifier | true |
Comments | Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element as much as possible. |
Observation.language | |
Definition | The base language in which the resource is written. |
Control | 0..1 |
Binding | A human language. The codes SHALL be taken from http://tools.ietf.org/html/bcp47 |
Type | code |
Comments | Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute). |
Observation.text | |
Definition | A human-readable narrative that contains a summary of the resource, and may be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it "clinically safe" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety. |
Control | 0..1 This element is affected by the following invariants: dom-1 |
Type | Narrative |
Alternate Names | narrative, html, xhtml, display |
Comments | Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative. |
Observation.contained | |
Definition | These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope. |
Control | 0..* |
Type | Resource |
Alternate Names | inline resources, anonymous resources, contained resources |
Comments | This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again. |
Observation.extension | |
Definition | An Extension |
Control | 0..* |
Type | Extension |
Slicing | This element introduces a set of slices. The slicing rules are:
|
Observation.extension (http://hl7.org/fhir/StructureDefinition/uslab-specimenrejectreason) | |
Definition | This extension describes the reason if a test is cancelled for specimen related reason. |
Control | 0..* |
Type | Extension (Extension Type: CodeableConcept) |
Observation.extension.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.extension.extension(extension) | |
Definition | An Extension |
Control | 0..0 |
Type | Extension |
Observation.extension.url | |
Definition | Source of the definition for the extension code - a logical name or a URL. |
Control | 1..1 |
Type | uri |
Comments | The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition should be version specific. This will ideally be the URI for the Resource Profile defining the extension, with the code for the extension after a #. |
Fixed Value | http://hl7.org/fhir/StructureDefinition/uslab-specimenrejectreason |
Observation.extension.valueCodeableConcept | |
Definition | Value of extension - may be a resource or one of a constrained set of the data types (see Extensibility in the spec for list). |
Control | 1..1 |
Binding | Specimen Rejection Reasons codes for identifying why a test was not performed. The codes SHALL be taken from US Laboratory Observation Specimen Rejection Codes; other codes may be used where these codes are not suitable |
Type | CodeableConcept |
Must Support | true |
Observation.extension.valueCodeableConcept.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.extension.valueCodeableConcept.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.extension.valueCodeableConcept.coding | |
Definition | A reference to a code defined by a terminology system. |
Control | 0..* |
Type | Coding |
Must Support | true |
Requirements | Allows for translations and alternate encodings within a code system. Also supports communication of the same instance to systems requiring different encodings. |
Comments | Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labelled as UserSelected = true. |
Observation.extension.valueCodeableConcept.coding.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.extension.valueCodeableConcept.coding.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.extension.valueCodeableConcept.coding.system | |
Definition | The identification of the code system that defines the meaning of the symbol in the code. |
Control | 1..1 |
Type | uri |
Must Support | true |
Requirements | Need to be unambiguous about the source of the definition of the symbol. |
Comments | The URI may be an OID (urn:oid:...) or a UUID (urn:uuid:...). OIDs and UUIDs SHALL be references to the HL7 OID registry. Otherwise, the URI should come from HL7's list of FHIR defined special URIs or it should de-reference to some definition that establish the system clearly and unambiguously. |
Observation.extension.valueCodeableConcept.coding.version | |
Definition | The version of the code system which was used when choosing this code. Note that a well-maintained code system does not need the version reported, because the meaning of codes is consistent across versions. However this cannot consistently be assured. and when the meaning is not guaranteed to be consistent, the version SHOULD be exchanged. |
Control | 0..1 |
Type | string |
Comments | Where the terminology does not clearly define what string should be used to identify code system versions, the recommendation is to use the date (expressed in FHIR date format) on which that version was officially published as the version date. |
Observation.extension.valueCodeableConcept.coding.code | |
Definition | A symbol in syntax defined by the system. The symbol may be a predefined code or an expression in a syntax defined by the coding system (e.g. post-coordination). |
Control | 1..1 |
Type | code |
Must Support | true |
Requirements | Need to refer to a particular code in the system. |
Observation.extension.valueCodeableConcept.coding.display | |
Definition | A representation of the meaning of the code in the system, following the rules of the system. |
Control | 0..1 |
Type | string |
Must Support | true |
Requirements | Need to be able to carry a human-readable meaning of the code for readers that do not know the system. |
Observation.extension.valueCodeableConcept.coding.userSelected | |
Definition | Indicates that this coding was chosen by a user directly - i.e. off a pick list of available items (codes or displays). |
Control | 0..1 |
Type | boolean |
Requirements | This has been identified as a clinical safety criterium - that this exact system/code pair was chosen explicitly, rather than inferred by the system based on some rules or language processing. |
Comments | Amongst a set of alternatives, a directly chosen code is the most appropriate starting point for new translations. There is some ambiguity about what exactly 'directly chosen' implies, and trading partner agreement may be needed to clarify the use of this element and its consequences more completely. |
Observation.extension.valueCodeableConcept.text | |
Definition | A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user. |
Control | 0..1 |
Type | string |
Must Support | true |
Requirements | The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source. |
Comments | Very often the text is the same as a displayName of one of the codings. |
Observation.extension (http://hl7.org/fhir/StructureDefinition/uslab-observationkind) | |
Definition | This extension is used to classify the kind of observation in Observation.value for laboratory reporting and to differentiate between actual test results, responses to filler questions when ordering tests and other unsolicted responses. This may be required to drive operational functionality. |
Control | 1..1 |
Type | Extension (Extension Type: code) |
Observation.modifierExtension | |
Definition | May be used to represent additional information that is not part of the basic definition of the resource, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. |
Control | 0..* |
Type | Extension |
Is Modifier | true |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.identifier | |
Definition | A unique identifier for the simple observation instance. |
Control | 1..* |
Type | Identifier |
Must Support | true |
Requirements | Allows observations to be distinguished and referenced. |
Observation.identifier.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.identifier.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.identifier.use | |
Definition | The purpose of this identifier. |
Control | 1..1 |
Binding | Identifies the purpose for this identifier, if known . The codes SHALL be taken from IdentifierUse |
Type | code |
Is Modifier | true |
Must Support | true |
Requirements | Allows the appropriate identifier for a particular context of use to be selected from among a set of identifiers. |
Comments | This is labeled as "Is Modifier" because applications should not mistake a temporary id for a permanent one. Applications can assume that an identifier is permanent unless it explicitly says that it is temporary. |
Observation.identifier.type | |
Definition | A coded type for the identifier that can be used to determine which identifier to use for a specific purpose. |
Control | 0..1 |
Binding | A coded type for an identifier that can be used to determine which identifier to use for a specific purpose. The codes SHALL be taken from Identifier Type Codes; other codes may be used where these codes are not suitable |
Type | CodeableConcept |
Requirements | Allows users to make use of identifiers when the identifier system is not known. |
Comments | This element deals only with general categories of identifiers. It SHOULD not be used for codes that correspond 1..1 with the Identifier.system. Some identifiers may fall into multiple categories due to common usage. Where the system is known, a type is unnecessary because the type is always part of the system definition. However systems often need to handle identifiers where the system is not known. There is not a 1:1 relationship between type and system, since many different systems have the same type. |
Observation.identifier.system | |
Definition | Establishes the namespace in which set of possible id values is unique. |
Control | 1..1 |
Type | uri |
Must Support | true |
Requirements | There are many sequences of identifiers. To perform matching, we need to know what sequence we're dealing with. The system identifies a particular sequence or set of unique identifiers. |
Example | http://www.acme.com/identifiers/patient or urn:ietf:rfc:3986 if the Identifier.value itself is a full uri |
Observation.identifier.value | |
Definition | The portion of the identifier typically relevant to the user and which is unique within the context of the system. |
Control | 1..1 |
Type | string |
Must Support | true |
Comments | If the value is a full URI, then the system SHALL be urn:ietf:rfc:3986. The value's primary purpose is computational mapping. As a result, it may be normalized for comparison purposes (e.g. removing non-significant whitespace, dashes, etc.) A value formatted for human display can be conveyed using the Rendered Value extension. |
Example | 123456 |
Observation.identifier.period | |
Definition | Time period during which identifier is/was valid for use. |
Control | 0..1 |
Type | Period |
Observation.identifier.assigner | |
Definition | Organization that issued/manages the identifier. |
Control | 0..1 |
Type | Reference(Organization) |
Comments | The Identifier.assigner may omit the .reference element and only contain a .display element reflecting the name or other textual information about the assigning organization. |
Observation.status | |
Definition | The status of the result value. |
Control | 1..1 |
Binding | Codes providing the status of an observation. The codes SHALL be taken from ObservationStatus |
Type | code |
Is Modifier | true |
Must Support | true |
Requirements | Need to track the status of individual results. Some results are finalized before the whole report is finalized. |
Observation.category | |
Definition | A code that classifies the general type of observation being made. This is used for searching, sorting and display purposes. |
Control | 0..1 |
Binding | Codes for high level observation categories . For example codes, see Observation Category Codes |
Type | CodeableConcept |
Comments | The level of granularity is defined by the category concepts in the value set. More fine-grained filtering can be performed using the metadata and/or terminology hierarchy in Observation.code. |
Observation.code | |
Definition | The laboratory test that was performed. This is element is bound to LOINC. |
Control | 1..1 |
Binding | LOINC codes The codes SHALL be taken from US Laboratory Observation Profile Observation Name Codes; other codes may be used where these codes are not suitable |
Type | CodeableConcept |
Must Support | true |
Requirements | The use of the Logical Observation Identifiers Names and Codes (LOINC) code system is required where a LOINC code is available for the Observation.code, i.e. the being resulted. |
Alternate Names | Test Name, Observation Identifer |
Comments | UsageNote= The typical patterns for codes are: 1) a LOINC code either as a translation from a "local" code or as a primary code, or 2) a local code only if no suitable LOINC exists, or 3) both the local and the LOINC translation. Systems SHALL be capable of sending the local code if one exists. |
Observation.code.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.code.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.code.coding | |
Definition | A reference to a code defined by a terminology system. |
Control | 1..* |
Type | Coding |
Must Support | true |
Requirements | Allows for translations and alternate encodings within a code system. Also supports communication of the same instance to systems requiring different encodings. |
Comments | Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labelled as UserSelected = true. |
Observation.code.coding.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.code.coding.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.code.coding.system | |
Definition | The identification of the code system that defines the meaning of the symbol in the code. |
Control | 1..1 |
Type | uri |
Must Support | true |
Requirements | Need to be unambiguous about the source of the definition of the symbol. |
Comments | The URI may be an OID (urn:oid:...) or a UUID (urn:uuid:...). OIDs and UUIDs SHALL be references to the HL7 OID registry. Otherwise, the URI should come from HL7's list of FHIR defined special URIs or it should de-reference to some definition that establish the system clearly and unambiguously. |
Observation.code.coding.version | |
Definition | The version of the code system which was used when choosing this code. Note that a well-maintained code system does not need the version reported, because the meaning of codes is consistent across versions. However this cannot consistently be assured. and when the meaning is not guaranteed to be consistent, the version SHOULD be exchanged. |
Control | 0..1 |
Type | string |
Comments | Where the terminology does not clearly define what string should be used to identify code system versions, the recommendation is to use the date (expressed in FHIR date format) on which that version was officially published as the version date. |
Observation.code.coding.code | |
Definition | A symbol in syntax defined by the system. The symbol may be a predefined code or an expression in a syntax defined by the coding system (e.g. post-coordination). |
Control | 1..1 |
Type | code |
Must Support | true |
Requirements | Need to refer to a particular code in the system. |
Comments | Logical Observation Identifiers Names and Codes (LOINC) is a database and universal standard for identifying medical laboratory observations. |
Observation.code.coding.display | |
Definition | A representation of the meaning of the code in the system, following the rules of the system. |
Control | 0..1 |
Type | string |
Must Support | true |
Requirements | Need to be able to carry a human-readable meaning of the code for readers that do not know the system. |
Comments | When using LOINC 'long common name' is preferred although the LOINC 'short name' or the LOINC 'fully-specified name can also be used. ( http://lionc.org.terms-of-use). |
Observation.code.coding.userSelected | |
Definition | Indicates that this coding was chosen by a user directly - i.e. off a pick list of available items (codes or displays). |
Control | 0..1 |
Type | boolean |
Requirements | This has been identified as a clinical safety criterium - that this exact system/code pair was chosen explicitly, rather than inferred by the system based on some rules or language processing. |
Comments | Amongst a set of alternatives, a directly chosen code is the most appropriate starting point for new translations. There is some ambiguity about what exactly 'directly chosen' implies, and trading partner agreement may be needed to clarify the use of this element and its consequences more completely. |
Observation.code.text | |
Definition | This is the laboratory defined display text for the lab test if different from the code display text(s). |
Control | 0..1 |
Type | string |
Must Support | true |
Requirements | Used when the laboratory define how the dsplay text if different from the code display text. |
Comments | If this exists, this is the text to be used for display. |
Observation.subject | |
Definition | The patient, or group of patients, location, or device whose characteristics (direct or indirect) are described by the observation and into whose record the observation is placed. Comments: Indirect characteristics may be those of a specimen, fetus, donor, other observer (for example a relative or EMT), or any observation made about the subject. |
Control | 1..1 |
Type | Choice of: Reference(US Laboratory Patient Profile), Reference(US Laboratory Patient Profile) |
Must Support | true |
Requirements | Observations have no value if you don't know who or what they're about. |
Comments | One would expect this element to be a cardinality of 1..1. The only circumstance in which the subject can be missing is when the observation is made by a device that does not know the patient. In this case, the observation SHALL be matched to a patient through some context/channel matching technique, and at this point, the observation should be updated. If the target of the observation is different than the subject, the general extension observation-focal-subject. may be used. However, the distinction between the patient's own value for an observation versus that of the fetus, or the donor or blood product unit, etc., are often specified in the observation code. |
Observation.encounter | |
Definition | The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made. |
Control | 0..1 |
Type | Reference(Encounter) |
Requirements | For some observations it may be important to know the link between an observation and a particular encounter. |
Observation.effective[x] | |
Definition | For lab tests this is the specimen collection date. For Ask at Order Entry Questions (AOE)'s this is the date the question was asked. |
Control | 0..1 |
Type | Choice of: dateTime, Period |
[x] Note | See Choice of Data Types for further information about how to use [x] |
Must Support | true |
Requirements | Minimum Precision to Day. |
Comments | At least a date should be present unless this observation is a historical report. |
Invariants | Defined on this element inv-1: Datetime must be at least to day. (xpath: f:matches(./\d{4}-[01]\d-[0-3]\dT[0-2]\d:[0-5]\d([+-][0-2]\d:[0-5]\d|Z)/)) |
Observation.issued | |
Definition | The date and time this observation was made available to providers, typically after the results have been reviewed and verified. |
Control | 0..1 |
Type | instant |
Must Support | true |
Requirements | Minimum Precision to Day. |
Comments | Updated when the result is updated. |
Invariants | Defined on this element inv-4: Datetime must be at least to day. (xpath: f:matches(./\d{4}-[01]\d-[0-3]\dT[0-2]\d:[0-5]\d([+-][0-2]\d:[0-5]\d|Z)/)) |
Observation.performer | |
Definition | Who was responsible for asserting the observed value as "true". |
Control | 0..1 |
Type | Choice of: Reference(Practitioner), Reference(Organization), Reference(Patient), Reference(RelatedPerson) |
Requirements | May give a degree of confidence in the observation and also indicates where follow-up questions should be directed. |
Slicing | This element introduces a set of slices. The slicing rules are:
|
Observation.performer(USLabPerformingLabSlice) | |
Definition | Who was responsible for asserting the observed value as "true". |
Control | 1..1 |
Type | Reference(US Laboratory Organization Profile) |
Must Support | true |
Requirements | If lab generated results need organization. |
Observation.value[x] | |
Definition | This is the actual coded result. |
Control | 0..1 |
Binding | SNOMED CT for coded results The codes SHALL be taken from SNOMED CT Codes; other codes may be used where these codes are not suitable |
Type | Choice of: Quantity, CodeableConcept, string, Range, Ratio, SampledData, Attachment, time, dateTime, Period |
[x] Note | See Choice of Data Types for further information about how to use [x] |
Must Support | true |
Requirements | The use of the SNOMED-CT code system is required where a SNOMED-CT concept code is available for Observation.valueCodeableConcept, i.e. the actual coded result. |
Alternate Names | coded result |
Comments | Normally, an observation will have either a value or a set of related observations. A few observations (e.g. Apgar score) may have both a value and related observations (for an Apgar score, the observations from which the measure is derived). If a value is present, the datatype for this element should be determined by Observation.code. This element has a variable name depending on the type as follows: valueQuantity, valueCodeableConcept, valueString, valueRange, valueRatio, valueSampledData, valueAttachment, valueTime, valueDateTime, or valuePeriod. (The name format is "'value' + the type name" with a capital on the first letter of the type). If the data element is usually coded or if the type associated with the Observation.value defines a coded value, use CodeableConcept instead of string datatype even if the value is uncoded text. A value set is bound to the ValueCodeableConcept element. For boolean values use valueCodeableConcept and select codes from HL7 Version 2 Table 0136. These "yes/no" concepts can be mapped to the display name "true/false" or other mutually exclusive terms that may be needed. For further discussion and examples see the notes section below. |
Observation.dataAbsentReason | |
Definition | Provides a reason why the expected value in the element Observation.value[x] is missing. |
Control | 0..1 This element is affected by the following invariants: obs-6 |
Binding | Codes specifying why the result (Observation.value[x]) is missing. The codes SHALL be taken from Observation Value Absent Reason; other codes may be used where these codes are not suitable |
Type | CodeableConcept |
Must Support | true |
Requirements | For many results it is necessary to handle exceptional values in measurements. |
Comments | Null or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be "detected", "not detected", "inconclusive", or "specimen unsatisfactory". The alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code "error" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values. |
Observation.interpretation | |
Definition | The assessment made based on the result of the observation. Intended as a simple compact code often placed adjacent to the result value in reports and flow sheets to signal the meaning/normalcy status of the result. Otherwise known as abnormal flag. |
Control | 0..1 |
Binding | Codes identifying interpretations of observations The codes SHALL be taken from US Laboratory Observation Profile Interpretation Codes |
Type | CodeableConcept |
Must Support | true |
Requirements | For some results, particularly numeric results, an interpretation is necessary to fully understand the significance of a result. |
Alternate Names | Abnormal Flag |
Observation.interpretation.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.interpretation.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.interpretation.coding | |
Definition | A reference to a code defined by a terminology system. |
Control | 1..* |
Type | Coding |
Must Support | true |
Requirements | Allows for translations and alternate encodings within a code system. Also supports communication of the same instance to systems requiring different encodings. |
Comments | Codes may be defined very casually in enumerations, or code lists, up to very formal definitions such as SNOMED CT - see the HL7 v3 Core Principles for more information. Ordering of codings is undefined and SHALL NOT be used to infer meaning. Generally, at most only one of the coding values will be labelled as UserSelected = true. |
Observation.interpretation.coding.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.interpretation.coding.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.interpretation.coding.system | |
Definition | The identification of the code system that defines the meaning of the symbol in the code. |
Control | 1..1 |
Type | uri |
Must Support | true |
Requirements | Need to be unambiguous about the source of the definition of the symbol. |
Comments | The URI may be an OID (urn:oid:...) or a UUID (urn:uuid:...). OIDs and UUIDs SHALL be references to the HL7 OID registry. Otherwise, the URI should come from HL7's list of FHIR defined special URIs or it should de-reference to some definition that establish the system clearly and unambiguously. |
Observation.interpretation.coding.version | |
Definition | The version of the code system which was used when choosing this code. Note that a well-maintained code system does not need the version reported, because the meaning of codes is consistent across versions. However this cannot consistently be assured. and when the meaning is not guaranteed to be consistent, the version SHOULD be exchanged. |
Control | 0..1 |
Type | string |
Comments | Where the terminology does not clearly define what string should be used to identify code system versions, the recommendation is to use the date (expressed in FHIR date format) on which that version was officially published as the version date. |
Observation.interpretation.coding.code | |
Definition | A symbol in syntax defined by the system. The symbol may be a predefined code or an expression in a syntax defined by the coding system (e.g. post-coordination). |
Control | 1..1 |
Type | code |
Must Support | true |
Requirements | Need to refer to a particular code in the system. |
Observation.interpretation.coding.display | |
Definition | A representation of the meaning of the code in the system, following the rules of the system. |
Control | 0..1 |
Type | string |
Requirements | Need to be able to carry a human-readable meaning of the code for readers that do not know the system. |
Observation.interpretation.coding.userSelected | |
Definition | Indicates that this coding was chosen by a user directly - i.e. off a pick list of available items (codes or displays). |
Control | 0..1 |
Type | boolean |
Requirements | This has been identified as a clinical safety criterium - that this exact system/code pair was chosen explicitly, rather than inferred by the system based on some rules or language processing. |
Comments | Amongst a set of alternatives, a directly chosen code is the most appropriate starting point for new translations. There is some ambiguity about what exactly 'directly chosen' implies, and trading partner agreement may be needed to clarify the use of this element and its consequences more completely. |
Observation.interpretation.text | |
Definition | A human language representation of the concept as seen/selected/uttered by the user who entered the data and/or which represents the intended meaning of the user. |
Control | 0..1 |
Type | string |
Requirements | The codes from the terminologies do not always capture the correct meaning with all the nuances of the human using them, or sometimes there is no appropriate code at all. In these cases, the text is used to capture the full meaning of the source. |
Comments | Very often the text is the same as a displayName of one of the codings. |
Observation.comment | |
Definition | May include statements about significant, unexpected or unreliable values, or information about the source of the value where this may be relevant to the interpretation of the result. |
Control | 0..1 |
Type | string |
Requirements | Need to be able to provide free text additional information. |
Observation.bodySite | |
Definition | Indicates the site on the subject's body where the observation was made (i.e. the target site). |
Control | 0..0 |
Binding | Codes describing anatomical locations. May include laterality. For example codes, see SNOMED CT Body Structures |
Type | CodeableConcept |
Requirements | Knowing where the observation is made is important for tracking if multiple sites are possible. |
Comments | Only used if not implicit in code found in Observation.code. If the use case requires BodySite to be handled as a separate resource instead of an inline coded element (e.g. to identify and track separately) then use the standard extension body-site-instance. |
Observation.method | |
Definition | Indicates the mechanism used to perform the observation. |
Control | 0..1 |
Binding | Methods for simple observations. For example codes, see Observation Methods |
Type | CodeableConcept |
Requirements | In some cases, method can impact results and is thus used for determining whether results can be compared or determining significance of results. |
Comments | Only used if not implicit in code for Observation.code. |
Observation.specimen | |
Definition | The specimen that was used when this observation was made. |
Control | 0..1 |
Type | Reference(US Laboratory Specimen Profile) |
Must Support | true |
Comments | Observations are not made on specimens themselves; they are made on a subject, but usually by the means of a specimen. Note that although specimens are often involved, they are not always tracked and reported explicitly. Also note that observation resources may be used in contexts that track the specimen explicitly (e.g. Diagnostic Report). |
Observation.device | |
Definition | The device used to generate the observation data. |
Control | 0..1 |
Type | Choice of: Reference(Device), Reference(DeviceMetric) |
Comments | An extension should be used if further typing of the device is needed. Devices used to support obtaining an observation can be represented using either extension or through the Observation.related element. |
Observation.referenceRange | |
Definition | Guidance on how to interpret the value by comparison to a normal or recommended range. |
Control | 0..* |
Type | BackboneElement |
Requirements | Knowing what values are considered "normal" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts. |
Comments | Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g. specific to the patient's age, gender, weight and other factors), but this may not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties. |
Invariants | Defined on this element obs-3: Must have at least a low or a high or text (xpath: (exists(f:low) or exists(f:high)or exists(f:text))) |
Observation.referenceRange.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.referenceRange.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.referenceRange.modifierExtension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. |
Control | 0..* |
Type | Extension |
Is Modifier | true |
Alternate Names | extensions, user content, modifiers |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.referenceRange.low | |
Definition | The value of the low bound of the reference range. The low bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the low bound is omitted, it is assumed to be meaningless (e.g. reference range is <=2.3). |
Control | 0..1 This element is affected by the following invariants: obs-3 |
Type | Quantity(SimpleQuantity) |
Observation.referenceRange.high | |
Definition | The value of the high bound of the reference range. The high bound of the reference range endpoint is inclusive of the value (e.g. reference range is >=5 - <=9). If the high bound is omitted, it is assumed to be meaningless (e.g. reference range is >= 2.3). |
Control | 0..1 This element is affected by the following invariants: obs-3 |
Type | Quantity(SimpleQuantity) |
Observation.referenceRange.meaning | |
Definition | Code for the meaning of the reference range. |
Control | 0..1 |
Binding | Code for the meaning of a reference range. For example codes, see Observation Reference Range Meaning Codes |
Type | CodeableConcept |
Requirements | Need to be able to say what kind of reference range this is - normal, recommended, therapeutic, or perhaps what state this reference range applies to (i.e. age, hormonal cycles, etc.). |
Comments | This SHOULD be populated if there is more than one range. |
Observation.referenceRange.age | |
Definition | The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so. |
Control | 0..1 |
Type | Range |
Requirements | Some analytes vary greatly over age. |
Observation.referenceRange.text | |
Definition | Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of "Negative" or a list or table of 'normals'. |
Control | 0..1 |
Type | string |
Observation.related | |
Definition | A reference to another resource (usually another Observation but could also be a QuestionnaireAnswer) whose relationship is defined by the relationship type code. |
Control | 0..0 |
Type | BackboneElement |
Requirements | Normally, an observation will have either a value or a set of related observations. A few observations (e.g. Apgar score) may have both a value and a set of related observations or sometimes QuestionnaireResponse from which the measure is derived. |
Comments | For a discussion on the ways Observations can assembled in groups together see Notes below. |
Observation.related.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.related.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.related.modifierExtension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. |
Control | 0..* |
Type | Extension |
Is Modifier | true |
Alternate Names | extensions, user content, modifiers |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.related.type | |
Definition | A code specifying the kind of relationship that exists with the target resource. |
Control | 0..1 |
Binding | Codes specifying how two observations are related. The codes SHALL be taken from ObservationRelationshipType |
Type | code |
Requirements | A relationship type SHOULD be provided. |
Comments | "derived-from" is only logical choice when referencing QuestionnaireAnswer resource. |
Observation.related.target | |
Definition | A reference to the observation or QuestionnaireResponse resource that is related to this observation. |
Control | 1..1 |
Type | Choice of: Reference(Observation), Reference(QuestionnaireResponse) |
Observation.component | |
Definition | Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations. |
Control | 0..* |
Type | BackboneElement |
Requirements | Component observations share the same attributes in the Observation resource as the primary observation and are always treated a part of a single observation (they are not separable). However, the reference range for the primary observation value is not inherited by the component values and is required when appropriate for each component observation. |
Comments | For a discussion on the ways Observations can assembled in groups together see Notes below. |
Observation.component.id | |
Definition | unique id for the element within a resource (for internal references). |
Control | 0..1 |
Type | id |
Observation.component.extension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. |
Control | 0..* |
Type | Extension |
Alternate Names | extensions, user content |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.component.modifierExtension | |
Definition | May be used to represent additional information that is not part of the basic definition of the element, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions. |
Control | 0..* |
Type | Extension |
Is Modifier | true |
Alternate Names | extensions, user content, modifiers |
Comments | There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone. |
Observation.component.code | |
Definition | Describes what was observed. Sometimes this is called the observation "code". |
Control | 1..1 This element is affected by the following invariants: obs-7 |
Binding | Codes identifying names of simple observations. For example codes, see LOINC Codes |
Type | CodeableConcept |
Requirements | Knowing what kind of observation is being made is essential to understanding the observation. |
Observation.component.value[x] | |
Definition | The information determined as a result of making the observation, if the information has a simple value. |
Control | 0..1 |
Type | Choice of: Quantity, CodeableConcept, string, Range, Ratio, SampledData, Attachment, time, dateTime, Period |
[x] Note | See Choice of Data Types for further information about how to use [x] |
Requirements | An observation exists to have a value, though it may not if it is in error, or it represents a group of observations. |
Comments | Normally, an observation will have either a value or a set of related observations. A few observations (e.g. Apgar score) may have both a value and related observations (for an Apgar score, the observations from which the measure is derived). If a value is present, the datatype for this element should be determined by Observation.code. A CodeableConcept with just a text would be used instead of a string if the field was usually coded, or if the type associated with the Observation.code defines a coded value. For boolean values use valueCodeableConcept and select codes from <http://hl7.org/fhir/ValueSet/v2-0136> (These "yes/no" concepts can be mapped to the display name "true/false" or other mutually exclusive terms that may be needed"). The element, Observation.value[x], has a variable name depending on the type as follows: valueQuantity, valueCodeableConcept, valueRatio, valueChoice, valuePeriod, valueSampleData, or valueString (The name format is "'value' + the type name" with a capital on the first letter of the type). |
Observation.component.dataAbsentReason | |
Definition | Provides a reason why the expected value in the element Observation.value[x] is missing. |
Control | 0..1 This element is affected by the following invariants: obs-6 |
Binding | Codes specifying why the result (Observation.value[x]) is missing. The codes SHALL be taken from Observation Value Absent Reason; other codes may be used where these codes are not suitable |
Type | CodeableConcept |
Requirements | For many results it is necessary to handle exceptional values in measurements. |
Comments | "Null" or exceptional values can be represented two ways in FHIR Observations. One way is to simply include them in the value set and represent the exceptions in the value. For example, measurement values for a serology test could be "detected", "not detected", "inconclusive", or "test not done". The alternate way is to use the value element for actual observations and use the explicit dataAbsentReason element to record exceptional values. For example, the dataAbsentReason code "error" could be used when the measurement was not completed. Because of these options, use-case agreements are required to interpret general observations for exceptional values. |
Observation.component.referenceRange | |
Definition | Guidance on how to interpret the value by comparison to a normal or recommended range. |
Control | 0..* |
Type | See referenceRange |
Requirements | Knowing what values are considered "normal" can help evaluate the significance of a particular result. Need to be able to provide multiple reference ranges for different contexts. |
Comments | Most observations only have one generic reference range. Systems MAY choose to restrict to only supplying the relevant reference range based on knowledge about the patient (e.g. specific to the patient's age, gender, weight and other factors), but this may not be possible or appropriate. Whenever more than one reference range is supplied, the differences between them SHOULD be provided in the reference range and/or age properties. |