Genomics Reporting Implementation Guide
2.0.0 - trial-use

This page is part of the Genetic Reporting Implementation Guide (v2.0.0: STU 2) based on FHIR R4. This is the current published version. For a full list of available versions, see the Directory of published versions

: VCFFile - TTL Representation

Raw ttl | Download


@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:DocumentReference;
  fhir:nodeRole fhir:treeRoot;
  fhir:Resource.id [ fhir:value "VCFFile"];
  fhir:Resource.meta [
     fhir:Meta.profile [
       fhir:value "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-document-reference";
       fhir:index 0;
       fhir:link <http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/genomics-document-reference>     ]
  ];
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ];
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource \"VCFFile\" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-genomics-document-reference.html\">Genomics DocumentReference</a></p></div><p><b>status</b>: current</p><p><b>subject</b>: <a href=\"Patient-CGPatientExample01.html\">Patient/CGPatientExample01</a> \" EVERYMAN\"</p><p><b>description</b>: ... details about how this VCF was generated ...</p><blockquote><p><b>content</b></p></blockquote><h3>Contexts</h3><table class=\"grid\"><tr><td>-</td><td><b>Related</b></td></tr><tr><td>*</td><td><a href=\"DiagnosticReport-PGxGenomicsReportEMERGE.html\">DiagnosticReport/PGxGenomicsReportEMERGE</a></td></tr></table></div>"
  ];
  fhir:DocumentReference.status [ fhir:value "current"];
  fhir:DocumentReference.subject [
     fhir:Reference.reference [ fhir:value "Patient/CGPatientExample01" ]
  ];
  fhir:DocumentReference.description [ fhir:value "... details about how this VCF was generated ..."];
  fhir:DocumentReference.content [
     fhir:index 0;
     fhir:DocumentReference.content.attachment [
       fhir:Attachment.url [ fhir:value "http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/ALL.chr1.phase3_shapeit2_mvncall_integrated_v5b.20130502.genotypes.vcf.gz" ]     ]
  ];
  fhir:DocumentReference.context [
     fhir:DocumentReference.context.related [
       fhir:index 0;
       fhir:Reference.reference [ fhir:value "DiagnosticReport/PGxGenomicsReportEMERGE" ]     ]
  ].

# - ontology header ------------------------------------------------------------

 a owl:Ontology;
  owl:imports fhir:fhir.ttl.