Obs-uslab-example2.xml

USLab Coded Observation Profile Canonical Example: N gonorrhoeae PCR (id = "uslab-example2")

Raw XML

<Observation xmlns="http://hl7.org/fhir">
  <id value="uslab-example2"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><!-- Snipped for brevity --></div>
  </text><!--    extenstion for specimen reject goes here - not for this use case
  &lt;extension url=&quot;http://hl7.org/fhir/ExtensionDefinition/uslabspecimenrejectreason&quot;&gt;
    &lt;valueCodeableConcept&gt;
      &lt;coding&gt;
        &lt;system value=&quot;http://hl7.org/fhir/v2/0490&quot;/&gt;
        &lt;code value=&quot;EX&quot;/&gt;
        &lt;display value=&quot;Expired&quot;/&gt;
      &lt;/coding&gt;
    &lt;/valueCodeableConcept&gt;
  &lt;/extension&gt;
   --><!--    extenstion for observation kind goes here    -->
  <extension url="http://hl7.org/fhir/ExtensionDefinition/uslabobservationkind">
    <valueCode value="result"/>
  </extension><!--   EH :  The local and LOINC test codes go here    -->
  <code><!--    EH: LOINC code goes here   -->
    <coding>
      <system value="http://loinc.org"/>
      <code value="43305-2"/>
      <display value="Neisseria gonorrhoeae rRNA [Presence] in Unspecified specimen by Probe and target amplification
       method"/>
    </coding><!--    EH: LOCAL code goes here   -->
    <coding>
      <system value="urn:oid:2.16.840.1.113883.3.72.5.24"/>
      <code value="GCPCR"/>
      <display value="APTIMA GC"/>
    </coding>
    <text value="Neisseria gonorrhoeae by PCR"/>
  </code><!--   EH :  The local and SNOMED Result codes go here    -->
  <valueCodeableConcept>
    <coding>
      <system value="http://snomed.info/sct"/>
      <code value="10828004"/>
      <display value="Positive"/>
    </coding>
    <coding>
      <system value="urn:oid:2.16.840.1.113883.3.72.5.24"/>
      <code value="POS"/>
      <display value="Positive"/>
    </coding>
    <text value="Positive for Neisseira gonorrheoea rRNA"/>
  </valueCodeableConcept><!--     eH dataabsent reason  would go here if valueQuantity was empty e.g.:
  &lt;dataAbsentReason value=&quot;error&quot;&lt;/dataAbsentReason&gt;    -->
  <interpretation>
    <coding>
      <system value="http://hl7.org/fhir/v2/0078"/>
      <code value="A"/>
    </coding>
  </interpretation>
  <appliesDateTime value="2014-12-05"/><!--    EH: Showing dateTime to ss with TZO although only needed to Day    -->
  <issued value="2014-12-06T15:42:15-08:00"/>
  <status value="final"/>
  <identifier>
    <use value="official"/>
    <label value="lab test result ID"/>
    <system value="http://lis.acmelabs.org/identifiers/labtestresult"/>
    <value value="2345"/>
  </identifier>
  <subject>
    <reference value="Patient/uslab-example1"/>
    <display value="Todd Lerr"/>
  </subject>
  <specimen>
    <reference value="Specimen/uslab-example1"/>
    <display value="Blood sample"/>
  </specimen>
  <performer>
    <reference value="Practitioner/uslab-example1"/>
    <display value="Dr Leonard T Bloodraw Jr"/>
  </performer>
</Observation>