Retrieval of Real World Data for Clinical Research
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This page is part of the Retrieval of Real World Data for Clinical Research (v1.0.0: STU1) based on FHIR R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

: Covid-19 Example Test Codes - TTL Representation

Active as of 2023-05-26

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:ValueSet ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "ExampleCOVID19TestCodes"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/95209-3/\">95209-3</a></td><td>SARS-CoV+SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94763-0/\">94763-0</a></td><td>SARS-CoV-2 (COVID-19) [Presence] in Specimen by Organism specific culture</td></tr><tr><td><a href=\"https://loinc.org/94762-2/\">94762-2</a></td><td>SARS-CoV-2 (COVID-19) Ab [Presence] in Serum or Plasma by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94558-4/\">94558-4</a></td><td>SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94562-6/\">94562-6</a></td><td>SARS-CoV-2 (COVID-19) IgA Ab [Presence] in Serum or Plasma by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94768-9/\">94768-9</a></td><td>SARS-CoV-2 (COVID-19) IgA Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay</td></tr><tr><td><a href=\"https://loinc.org/95125-1/\">95125-1</a></td><td>SARS-CoV-2 (COVID-19) IgA+IgM [Presence] in Serum or Plasma by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94761-4/\">94761-4</a></td><td>SARS-CoV-2 (COVID-19) IgG Ab [Presence] in DBS by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94563-4/\">94563-4</a></td><td>SARS-CoV-2 (COVID-19) IgG Ab [Presence] in Serum or Plasma by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94507-1/\">94507-1</a></td><td>SARS-CoV-2 (COVID-19) IgG Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94547-7/\">94547-7</a></td><td>SARS-CoV-2 (COVID-19) IgG+IgM Ab [Presence] in Serum or Plasma by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/95416-4/\">95416-4</a></td><td>SARS-CoV-2 (COVID-19) IgM Ab [Presence] in DBS by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94564-2/\">94564-2</a></td><td>SARS-CoV-2 (COVID-19) IgM Ab [Presence] in Serum or Plasma by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94508-9/\">94508-9</a></td><td>SARS-CoV-2 (COVID-19) IgM Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay</td></tr><tr><td><a href=\"https://loinc.org/94760-6/\">94760-6</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Nasopharynx by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/95409-9/\">95409-9</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94533-7/\">94533-7</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94756-4/\">94756-4</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N1</td></tr><tr><td><a href=\"https://loinc.org/94757-2/\">94757-2</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N2</td></tr><tr><td><a href=\"https://loinc.org/94766-3/\">94766-3</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Serum or Plasma by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94316-7/\">94316-7</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94307-6/\">94307-6</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N1</td></tr><tr><td><a href=\"https://loinc.org/94308-4/\">94308-4</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N2</td></tr><tr><td><a href=\"https://loinc.org/95411-5/\">95411-5</a></td><td>SARS-CoV-2 (COVID-19) neutralizing antibody [Presence] in Serum by pVNT</td></tr><tr><td><a href=\"https://loinc.org/94559-2/\">94559-2</a></td><td>SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94639-2/\">94639-2</a></td><td>SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94534-5/\">94534-5</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94314-2/\">94314-2</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94565-9/\">94565-9</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with non-probe detection</td></tr><tr><td><a href=\"https://loinc.org/94759-8/\">94759-8</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/95406-5/\">95406-5</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Nose by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94500-6/\">94500-6</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94845-5/\">94845-5</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94822-4/\">94822-4</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by Sequencing</td></tr><tr><td><a href=\"https://loinc.org/94660-8/\">94660-8</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Serum or Plasma by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94309-2/\">94309-2</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94640-0/\">94640-0</a></td><td>SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94767-1/\">94767-1</a></td><td>SARS-CoV-2 (COVID-19) S gene [Presence] in Serum or Plasma by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/94641-8/\">94641-8</a></td><td>SARS-CoV-2 (COVID-19) S gene [Presence] in Specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/95825-6/\">95825-6</a></td><td>SARS-CoV-2 (COVID-19) Ab [Presence] in DBS by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/95542-7/\">95542-7</a></td><td>SARS-CoV-2 (COVID-19) Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay</td></tr><tr><td><a href=\"https://loinc.org/96119-3/\">96119-3</a></td><td>SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/95425-5/\">95425-5</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96448-6/\">96448-6</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N1</td></tr><tr><td><a href=\"https://loinc.org/95824-9/\">95824-9</a></td><td>SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Saliva (oral fluid) by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96120-1/\">96120-1</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Lower respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96091-4/\">96091-4</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Saliva (oral fluid) by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96123-5/\">96123-5</a></td><td>SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Upper respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/95608-6/\">95608-6</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with non-probe detection</td></tr><tr><td><a href=\"https://loinc.org/95424-8/\">95424-8</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by Sequencing</td></tr><tr><td><a href=\"https://loinc.org/95609-4/\">95609-4</a></td><td>SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory specimen by Sequencing</td></tr><tr><td><a href=\"https://loinc.org/96603-6/\">96603-6</a></td><td>SARS-CoV-2 (COVID-19) S protein RBD neutralizing antibody [Presence] in Serum or Plasma by sVNT</td></tr><tr><td><a href=\"https://loinc.org/95970-0/\">95970-0</a></td><td>SARS-CoV-2 (COVID-19) specific TCRB gene rearrangements [Presence] in Blood by Sequencing</td></tr><tr><td><a href=\"https://loinc.org/95971-8/\">95971-8</a></td><td>SARS-CoV-2 stimulated gamma interferon [Presence] in Blood</td></tr><tr><td><a href=\"https://loinc.org/96121-9/\">96121-9</a></td><td>SARS-related coronavirus E gene [Presence] in Lower respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/95823-1/\">95823-1</a></td><td>SARS-related coronavirus E gene [Presence] in Saliva (oral fluid) by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96122-7/\">96122-7</a></td><td>SARS-related coronavirus E gene [Presence] in Upper respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/97097-0/\">97097-0</a></td><td>SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Rapid immunoassay</td></tr><tr><td><a href=\"https://loinc.org/96763-8/\">96763-8</a></td><td>SARS-CoV-2 (COVID-19) E gene [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96957-6/\">96957-6</a></td><td>SARS-CoV-2 (COVID-19) M gene [Presence] in Upper respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96986-5/\">96986-5</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with non-probe detection</td></tr><tr><td><a href=\"https://loinc.org/96958-4/\">96958-4</a></td><td>SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N2</td></tr><tr><td><a href=\"https://loinc.org/97098-8/\">97098-8</a></td><td>SARS-CoV-2 (COVID-19) Nsp2 gene [Presence] in Upper respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96797-6/\">96797-6</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Oropharyngeal wash by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96829-7/\">96829-7</a></td><td>SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen from Donor by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96765-3/\">96765-3</a></td><td>SARS-CoV-2 (COVID-19) S gene [Presence] in Saliva (oral fluid) by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/96752-1/\">96752-1</a></td><td>SARS-CoV-2 (COVID-19) S gene mutation [Presence] in Specimen by Molecular genetics method</td></tr><tr><td><a href=\"https://loinc.org/98069-8/\">98069-8</a></td><td>SARS-CoV-2 (COVID-19) Ab [Presence] in Saliva (oral fluid) by Rapid immunoassay</td></tr><tr><td><a href=\"https://loinc.org/98132-4/\">98132-4</a></td><td>SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/98494-8/\">98494-8</a></td><td>SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Saliva (oral fluid) by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/98131-6/\">98131-6</a></td><td>SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Respiratory specimen by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/98493-0/\">98493-0</a></td><td>SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Saliva (oral fluid) by NAA with probe detection</td></tr><tr><td><a href=\"https://loinc.org/99596-9/\">99596-9</a></td><td>SARS-CoV-2 (COVID-19) N protein IgG Ab [Presence] in Serum or Plasma by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/99597-7/\">99597-7</a></td><td>SARS-CoV-2 (COVID-19) S protein IgG Ab [Presence] in Serum or Plasma by Immunoassay</td></tr><tr><td><a href=\"https://loinc.org/99772-6/\">99772-6</a></td><td>SARS-CoV-2 stimulated gamma interferon [Interpretation] in Blood Qualitative</td></tr></table></li></ul></div>"
  ] ; # 
  fhir:url [ fhir:v "http://hl7.org/fhir/uv/vulcan-rwd/ValueSet/ExampleCOVID19TestCodes"^^xsd:anyURI] ; # 
  fhir:version [ fhir:v "1.0.0"] ; # 
  fhir:name [ fhir:v "ExampleCOVID19TestCodes"] ; # 
  fhir:title [ fhir:v "Covid-19 Example Test Codes"] ; # 
  fhir:status [ fhir:v "active"] ; # 
  fhir:experimental [ fhir:v "true"^^xsd:boolean] ; # 
  fhir:date [ fhir:v "2023-05-26T22:51:53+10:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "HL7 International - Biomedical Research & Regulation Work Group"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "HL7 International - Biomedical Research & Regulation Work Group" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "http://hl7.org/Special/committees/rcrim" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "An example value set of LOINC codes representing COVID-19 tests."] ; # 
  fhir:jurisdiction ( [
    ( fhir:coding [
fhir:system [ fhir:v "http://unstats.un.org/unsd/methods/m49/m49.htm"^^xsd:anyURI ] ;
fhir:code [ fhir:v "001" ] ;
fhir:display [ fhir:v "World" ]     ] )
  ] ) ; # 
  fhir:copyright [ fhir:v "This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2020, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc"] ; # 
  fhir:compose [
    ( fhir:include [
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
      ( fhir:concept [
fhir:code [ fhir:v "95209-3" ]       ] [
fhir:code [ fhir:v "94763-0" ]       ] [
fhir:code [ fhir:v "94762-2" ]       ] [
fhir:code [ fhir:v "94558-4" ]       ] [
fhir:code [ fhir:v "94562-6" ]       ] [
fhir:code [ fhir:v "94768-9" ]       ] [
fhir:code [ fhir:v "95125-1" ]       ] [
fhir:code [ fhir:v "94761-4" ]       ] [
fhir:code [ fhir:v "94563-4" ]       ] [
fhir:code [ fhir:v "94507-1" ]       ] [
fhir:code [ fhir:v "94547-7" ]       ] [
fhir:code [ fhir:v "95416-4" ]       ] [
fhir:code [ fhir:v "94564-2" ]       ] [
fhir:code [ fhir:v "94508-9" ]       ] [
fhir:code [ fhir:v "94760-6" ]       ] [
fhir:code [ fhir:v "95409-9" ]       ] [
fhir:code [ fhir:v "94533-7" ]       ] [
fhir:code [ fhir:v "94756-4" ]       ] [
fhir:code [ fhir:v "94757-2" ]       ] [
fhir:code [ fhir:v "94766-3" ]       ] [
fhir:code [ fhir:v "94316-7" ]       ] [
fhir:code [ fhir:v "94307-6" ]       ] [
fhir:code [ fhir:v "94308-4" ]       ] [
fhir:code [ fhir:v "95411-5" ]       ] [
fhir:code [ fhir:v "94559-2" ]       ] [
fhir:code [ fhir:v "94639-2" ]       ] [
fhir:code [ fhir:v "94534-5" ]       ] [
fhir:code [ fhir:v "94314-2" ]       ] [
fhir:code [ fhir:v "94565-9" ]       ] [
fhir:code [ fhir:v "94759-8" ]       ] [
fhir:code [ fhir:v "95406-5" ]       ] [
fhir:code [ fhir:v "94500-6" ]       ] [
fhir:code [ fhir:v "94845-5" ]       ] [
fhir:code [ fhir:v "94822-4" ]       ] [
fhir:code [ fhir:v "94660-8" ]       ] [
fhir:code [ fhir:v "94309-2" ]       ] [
fhir:code [ fhir:v "94640-0" ]       ] [
fhir:code [ fhir:v "94767-1" ]       ] [
fhir:code [ fhir:v "94641-8" ]       ] [
fhir:code [ fhir:v "95825-6" ]       ] [
fhir:code [ fhir:v "95542-7" ]       ] [
fhir:code [ fhir:v "96119-3" ]       ] [
fhir:code [ fhir:v "95425-5" ]       ] [
fhir:code [ fhir:v "96448-6" ]       ] [
fhir:code [ fhir:v "95824-9" ]       ] [
fhir:code [ fhir:v "96120-1" ]       ] [
fhir:code [ fhir:v "96091-4" ]       ] [
fhir:code [ fhir:v "96123-5" ]       ] [
fhir:code [ fhir:v "95608-6" ]       ] [
fhir:code [ fhir:v "95424-8" ]       ] [
fhir:code [ fhir:v "95609-4" ]       ] [
fhir:code [ fhir:v "96603-6" ]       ] [
fhir:code [ fhir:v "95970-0" ]       ] [
fhir:code [ fhir:v "95971-8" ]       ] [
fhir:code [ fhir:v "96121-9" ]       ] [
fhir:code [ fhir:v "95823-1" ]       ] [
fhir:code [ fhir:v "96122-7" ]       ] [
fhir:code [ fhir:v "97097-0" ]       ] [
fhir:code [ fhir:v "96763-8" ]       ] [
fhir:code [ fhir:v "96957-6" ]       ] [
fhir:code [ fhir:v "96986-5" ]       ] [
fhir:code [ fhir:v "96958-4" ]       ] [
fhir:code [ fhir:v "97098-8" ]       ] [
fhir:code [ fhir:v "96797-6" ]       ] [
fhir:code [ fhir:v "96829-7" ]       ] [
fhir:code [ fhir:v "96765-3" ]       ] [
fhir:code [ fhir:v "96752-1" ]       ] [
fhir:code [ fhir:v "98069-8" ]       ] [
fhir:code [ fhir:v "98132-4" ]       ] [
fhir:code [ fhir:v "98494-8" ]       ] [
fhir:code [ fhir:v "98131-6" ]       ] [
fhir:code [ fhir:v "98493-0" ]       ] [
fhir:code [ fhir:v "99596-9" ]       ] [
fhir:code [ fhir:v "99597-7" ]       ] [
fhir:code [ fhir:v "99772-6" ]       ] )     ] )
  ] . #