This page is part of the Genetic Reporting Implementation Guide (v0.1.0: STU 1 Ballot 1) based on FHIR v3.3.0. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

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Raw xml 


<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="genetic-coordinate-system"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><h2>GeneticCoordinateSystem</h2><div><p>Base coordinate systems start and end measurements for variants</p>
</div><p>This code system http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genetic-coordinate-system defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style="white-space:nowrap">0<a name="genetic-coordinate-system-0"> </a></td><td>0-based</td><td>0-based numbering or interbase coordinate system, inclusive start, exclusive end</td></tr><tr><td style="white-space:nowrap">1<a name="genetic-coordinate-system-1"> </a></td><td>1-based</td><td>1 for 1-based numbering or base coordinate system, inclusive start, inclusive end</td></tr></table></div>
  </text>
  <url
       value="http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/genetic-coordinate-system"/>
  <version value="2018may"/>
  <name value="GeneticCoordinateSystem"/>
  <status value="draft"/>
  <experimental value="false"/>
  <date value="2018-04-04T06:23:39+10:00"/>
  <contact>
    <telecom>
      <system value="url"/>
    </telecom>
    <telecom>
      <system value="email"/>
    </telecom>
  </contact>
  <description
               value="Base coordinate systems start and end measurements for variants"/>
  <caseSensitive value="true"/>
  <valueSet
            value="http://hl7.org/fhir/uv/genomics-reporting/ValueSet/genetic-coordinate-system"/>
  <content value="complete"/>
  <concept>
    <code value="0"/>
    <display value="0-based"/>
    <definition
                value="0-based numbering or interbase coordinate system, inclusive start, exclusive end"/>
  </concept>
  <concept>
    <code value="1"/>
    <display value="1-based"/>
    <definition
                value="1 for 1-based numbering or base coordinate system, inclusive start, inclusive end"/>
  </concept>
</CodeSystem>