minimal Common Oncology Data Elements (mCODE) Implementation Guide
2.1.0 - STU 2.1 United States of America flag

This page is part of the HL7 FHIR Implementation Guide: minimal Common Oncology Data Elements (mCODE) Release 1 - US Realm | STU1 (v2.1.0: STU 2) based on FHIR R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

: genomics-report-john-anyperson - XML Representation

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<DiagnosticReport xmlns="http://hl7.org/fhir">
  <id value="genomics-report-john-anyperson"/>
  <meta>
    <profile
             value="http://hl7.org/fhir/us/mcode/StructureDefinition/mcode-genomics-report"/>
  </meta>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><h2><span title="Codes: {http://loinc.org 81247-9}">Master HL7 genetic variant reporting panel</span> (<span title="Codes: {http://terminology.hl7.org/CodeSystem/v2-0074 LAB}">Laboratory</span>, <span title="Codes: {http://terminology.hl7.org/CodeSystem/v2-0074 GE}">Genetics</span>) </h2><table class="grid"><tr><td>Subject</td><td><b>John B. Anyperson </b> male, DoB: 1951-01-20 ( Medical Record Number: m123 (use: USUAL))</td></tr><tr><td>When For</td><td>2019-04-01</td></tr><tr><td>Reported</td><td>2019-04-01 11:45:33+1100</td></tr></table><p><b>Report Details</b></p><table class="grid"><tr><td><b>Code</b></td><td><b>Value</b></td><td><b>Flags</b></td><td><b>When For</b></td><td><b>Reported</b></td></tr><tr><td><a href="Observation-genomic-variant-somatic-single-nucleotide.html"><span title="Codes: {http://loinc.org 69548-6}">Genetic variant assessment</span></a></td><td><span title="Codes: {http://loinc.org LA9633-4}">Present</span></td><td><span title="Codes: {http://snomed.info/sct 10828004}">Positive (qualifier value)</span></td><td>2019-04-01</td><td/></tr><tr><td><a href="Observation-genomic-region-studied-stk11.html"><span title="Codes: {http://loinc.org 53041-0}">DNA region of interest panel</span></a></td><td/><td/><td>2019-04-01</td><td/></tr></table></div>
  </text>
  <status value="final"/>
  <category>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/v2-0074"/>
      <code value="LAB"/>
    </coding>
  </category>
  <category>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/v2-0074"/>
      <code value="GE"/>
    </coding>
  </category>
  <code>
    <coding>
      <system value="http://loinc.org"/>
      <code value="81247-9"/>
    </coding>
  </code>
  <subject>
    <reference value="Patient/cancer-patient-john-anyperson"/>
  </subject>
  <effectiveDateTime value="2019-04-01"/>
  <issued value="2019-04-01T11:45:33+11:00"/>
  <specimen>
    <reference value="Specimen/genomic-specimen-lung"/>
  </specimen>
  <result>
    <reference value="Observation/genomic-variant-somatic-single-nucleotide"/>
  </result>
  <result>
    <reference value="Observation/genomic-region-studied-stk11"/>
  </result>
</DiagnosticReport>