Release 4

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Sequence-graphic-example-2.ttl

Clinical Genomics Work Group

Maturity Level: N/A

Standards Status: Informative

Compartments: Patient

Raw Turtle (+ also see Turtle/RDF Format Specification)

MolecularSequence Graphic example-2

@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

<http://hl7.org/fhir/MolecularSequence/graphic-example-2> a fhir:MolecularSequence;
  fhir:nodeRole fhir:treeRoot;
  fhir:Resource.id [ fhir:value "graphic-example-2"];
  fhir:DomainResource.text [
     fhir:Narrative.status [ fhir:value "generated" ];
     fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: graphic-example-2</p><p><b>type</b>: dna</p><p><b>coordinateSystem</b>: 0</p><h3>ReferenceSeqs</h3><table><tr><td>-</td><td><b>ReferenceSeqString</b></td><td><b>Strand</b></td><td><b>WindowStart</b></td><td><b>WindowEnd</b></td></tr><tr><td>*</td><td>CGCCATTG</td><td>watson</td><td>0</td><td>8</td></tr></table><p><b>pointer</b>: <a>MolecularSequence/graphic-example-3</a></p></div>"
  ];
  fhir:MolecularSequence.type [ fhir:value "dna"];
  fhir:MolecularSequence.coordinateSystem [ fhir:value "0"^^xsd:integer];
  fhir:MolecularSequence.referenceSeq [
     fhir:MolecularSequence.referenceSeq.referenceSeqString [ fhir:value "CGCCATTG" ];
     fhir:MolecularSequence.referenceSeq.strand [ fhir:value "watson" ];
     fhir:MolecularSequence.referenceSeq.windowStart [ fhir:value "0"^^xsd:integer ];
     fhir:MolecularSequence.referenceSeq.windowEnd [ fhir:value "8"^^xsd:integer ]
  ];
  fhir:MolecularSequence.pointer [
     fhir:index 0;
     fhir:link <http://hl7.org/fhir/MolecularSequence/graphic-example-3>;
     fhir:Reference.reference [ fhir:value "MolecularSequence/graphic-example-3" ]
  ] .

<http://hl7.org/fhir/MolecularSequence/graphic-example-3> a fhir:MolecularSequence .

# - ontology header ------------------------------------------------------------

<http://hl7.org/fhir/MolecularSequence/graphic-example-2.ttl> a owl:Ontology;
  owl:imports fhir:fhir.ttl;
  owl:versionIRI <http://build.fhir.org/MolecularSequence/graphic-example-2.ttl> .

# -------------------------------------------------------------------------------------

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.