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4.19.6 Resource Specimen - Formal Definitions

Formal definitions for the elements in the Specimen resource.

Specimen
DefinitionSample for analysis.
Control1..1
Specimen.identifier
DefinitionId for specimen.
Control0..*
TypeIdentifier
Specimen.type
DefinitionKind of material that forms the specimen.
Control0..1
BindingSpecimenType: (See http://hl7.org/fhir/v2/vs/0487)
TypeCodeableConcept
CommentsThe type can change the way that a specimen is handled, and drives what kind of analyses can properly be performed on the specimen. It is frequently used in diagnostic work flow decision making systems.
Specimen.source
DefinitionParent specimen from which the focal specimen was a component.
Control0..*
To DoSource isn't a great name if it can also be a child. Why not two separate associations?.
Specimen.source.relationship
DefinitionWhether this relationship is to a parent or to a child.
Control1..1
BindingHierarchicalRelationshipType: Type indicating if this is a parent or child relationship (see http://hl7.org/fhir/hierarchical-relationship-type for values)
Typecode
Specimen.source.target
DefinitionThe specimen resource that is the target of this relationship.
Control0..*
TypeResource(Specimen)
Specimen.subject
DefinitionWhere the specimen came from. This may be the patient(s) or from the environment or a device.
Control1..1
TypeResource(Patient | Group | Device | Substance)
RequirementsMust know the subject context.
Specimen.accessionIdentifier
DefinitionThe identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures.
Control0..1
TypeIdentifier
Specimen.receivedTime
DefinitionTime when specimen was received for processing or testing.
Control0..1
TypedateTime
Specimen.collection
DefinitionDetails concerning the specimen collection.
Control1..1
Specimen.collection.collector
DefinitionPerson who collected the specimen.
Control0..1
TypeResource(Practitioner)
Specimen.collection.comment
DefinitionTo communicate any details or issues encountered during the specimen collection procedure.
Control0..*
Typestring
Specimen.collection.collected[x]
DefinitionTime when specimen was collected from subject - the physiologically relevant time.
Control0..1
TypedateTime|Period
Specimen.collection.quantity
DefinitionThe quantity of specimen collected; for instance the volume of a blood sample, or the physical measurement of an anatomic pathology sample.
Control0..1
TypeQuantity
Specimen.collection.method
DefinitionA coded value specifying the technique that is used to perform the procedure.
Control0..1
BindingSpecimenCollectionMethod: (See http://hl7.org/fhir/vs/specimen-collection-method)
TypeCodeableConcept
Specimen.collection.sourceSite
DefinitionAnatomical location from which the specimen should be collected (if subject is a patient). This element is not used for environmental specimens.
Control0..1
BindingBodySite: SNOMED CT Body site concepts (See http://hl7.org/fhir/vs/body-site)
TypeCodeableConcept
To DoIs this approach or target site?.
Specimen.treatment
DefinitionDetails concerning treatment and processing steps for the specimen.
Control0..*
Specimen.treatment.description
DefinitionTextual description of procedure.
Control0..1
Typestring
Specimen.treatment.procedure
DefinitionA coded value specifying the procedure used to process the specimen.
Control0..1
BindingSpecimenTreatmentProcedure: (See http://hl7.org/fhir/vs/specimen-treatment-procedure)
TypeCodeableConcept
Specimen.treatment.additive
DefinitionMaterial used in the processing step.
Control0..*
TypeResource(Substance)
Specimen.container
DefinitionThe container holding the specimen. The recursive nature of containers; i.e. blood in tube in tray in rack is not addressed here.
Control0..*
Specimen.container.identifier
DefinitionId for container. There may be multiple; a manufacturer's bar code, lab assigned identifier, etc. The container ID may differ from the specimen id in some circumstances.
Control0..*
TypeIdentifier
Specimen.container.description
DefinitionTextual description of the container.
Control0..1
Typestring
Specimen.container.type
DefinitionThe type of container associated with the specimen (e.g. slide, aliquot, etc).
Control0..1
BindingSpecimenContainerType: (See http://hl7.org/fhir/vs/specimen-container-type)
TypeCodeableConcept
Specimen.container.capacity
DefinitionThe capacity (volume or other measure) the container may contain.
Control0..1
TypeQuantity
Specimen.container.specimenQuantity
DefinitionThe quantity of specimen in the container; may be volume, dimensions, or other appropriate measurements, depending on the specimen type.
Control0..1
TypeQuantity
Specimen.container.additive
DefinitionAdditive associated with the container.
Control0..1
TypeResource(Substance)

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