Provenance-example-biocompute-object.xml

Provenance example for Biocompute objects (id = "example-biocompute-object")

<?xml version="1.0" encoding="UTF-8"?>

<Provenance xmlns="http://hl7.org/fhir">
  <id value="example-biocompute-object"/> 
  <text> 
    <status value="generated"/> 
    <div xmlns="http://www.w3.org/1999/xhtml">
      <p> 
        <b> Generated Narrative with Details</b> 
      </p> <p> 
        <b> id</b> : example-biocompute-object</p> <p> 
        <b> target</b> : <a href="http://build.fhir.org/sequence-example.html">MolecularSequence/example</a> 
      </p> <p> 
        <b> period</b> : 2017-6-6 --&gt; (ongoing)</p> <p> 
        <b> recorded</b> : 2016-6-9 8:12:14</p> <p> 
        <b> reason</b> : antiviral resistance detection (Details: [not stated] code null = 'null', stated as
         'antiviral resistance detection')</p> 
      <h3> Agents</h3> 
      <table> 
        <tr> 
          <td> -</td> 
          <td> 
            <b> Role</b> 
          </td> 
          <td> 
            <b> Who</b> 
          </td> 
        </tr> 
        <tr> 
          <td> *</td> 
          <td> Author (Details: http://hl7.org/fhir/provenance-participant-role code author = 'Author',
             stated as 'null')</td> 
          <td> 
            <a href="http://build.fhir.org/practitioner-example.html">Practitioner/example</a> 
          </td> 
        </tr> 
      </table> 
      <h3> Entities</h3> 
      <table> 
        <tr> 
          <td> -</td> 
          <td> 
            <b> Role</b> 
          </td> 
          <td> 
            <b> Reference</b> 
          </td> 
        </tr> 
        <tr> 
          <td> *</td> 
          <td> source</td> 
          <td> 
            <a href="https://hive.biochemistry.gwu.edu/cgi-bin/prd/htscsrs/servlet.cgi?pageid=bcoexample_1">Biocompute example</a> 
          </td> 
        </tr> 
      </table> 
    </div> 
  </text> 
  <target> 
    <reference value="MolecularSequence/example"/> 
  </target> 
  <occurredPeriod> 
    <start value="2017-06-06"/> 
  </occurredPeriod> 
  <recorded value="2016-06-09T08:12:14+10:00"/> 
  <reason> 
    <text value="antiviral resistance detection"/> 
  </reason> 

  <agent> 
    <type> 
      <coding> 
        <system value="http://terminology.hl7.org/CodeSystem/v3-ParticipationType"/> 
        <code value="AUT"/> 
      </coding> 
    </type> 
    <who> 
      <reference value="Practitioner/example"/> 
    </who> 
  </agent> 

  <entity> 
    <role value="source"/> 
    <what> 
      <identifier> 
        <!--      <reference value="https://hive.biochemistry.gwu.edu/cgi-bin/prd/htscsrs/servlet.cgi?pageid=bcoe
        xample_1"/>  todo: this is not legal; fix once definition is fixed   -->
        <type> 
          <coding> 
            <system value="https://hive.biochemistry.gwu.edu"/> 
            <code value="biocompute"/> 
            <display value="obj.1001"/> 
          </coding> 
        </type> 
        <value value="https://hive.biochemistry.gwu.edu/cgi-bin/prd/htscsrs/servlet.cgi?pageid=bcoexample_1"/> 
      </identifier> 
    </what> 
  </entity> 
</Provenance>