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Clinical Genomics Work Group | Maturity Level: N/A | Standards Status: Informative | Compartments: Patient |
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MolecularSequence Graphic example-4
@prefix fhir: <http://hl7.org/fhir/> . @prefix owl: <http://www.w3.org/2002/07/owl#> . @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . # - resource ------------------------------------------------------------------- <http://hl7.org/fhir/MolecularSequence/graphic-example-4> a fhir:MolecularSequence; fhir:nodeRole fhir:treeRoot; fhir:Resource.id [ fhir:value "graphic-example-4"]; fhir:DomainResource.text [ fhir:Narrative.status [ fhir:value "generated" ]; fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: graphic-example-4</p><p><b>type</b>: dna</p><p><b>coordinateSystem</b>: 0</p><h3>ReferenceSeqs</h3><table><tr><td>-</td><td><b>Chromosome</b></td><td><b>GenomeBuild</b></td><td><b>Strand</b></td><td><b>WindowStart</b></td><td><b>WindowEnd</b></td></tr><tr><td>*</td><td>chromosome 2 <span>(Details : {http://terminology.hl7.org/CodeSystem/chromosome-human code '2' = 'chromosome 2', given as 'chromosome 2'})</span></td><td>GRCh 38</td><td>watson</td><td>128273736</td><td>128273740</td></tr></table></div>" ]; fhir:MolecularSequence.type [ fhir:value "dna"]; fhir:MolecularSequence.coordinateSystem [ fhir:value "0"^^xsd:integer]; fhir:MolecularSequence.referenceSeq [ fhir:MolecularSequence.referenceSeq.chromosome [ fhir:CodeableConcept.coding [ fhir:index 0; fhir:Coding.system [ fhir:value "http://terminology.hl7.org/CodeSystem/chromosome-human" ]; fhir:Coding.code [ fhir:value "2" ]; fhir:Coding.display [ fhir:value "chromosome 2" ] ] ]; fhir:MolecularSequence.referenceSeq.genomeBuild [ fhir:value "GRCh 38" ]; fhir:MolecularSequence.referenceSeq.strand [ fhir:value "watson" ]; fhir:MolecularSequence.referenceSeq.windowStart [ fhir:value "128273736"^^xsd:integer ]; fhir:MolecularSequence.referenceSeq.windowEnd [ fhir:value "128273740"^^xsd:integer ] ] . # - ontology header ------------------------------------------------------------ <http://hl7.org/fhir/MolecularSequence/graphic-example-4.ttl> a owl:Ontology; owl:imports fhir:fhir.ttl; owl:versionIRI <http://build.fhir.org/MolecularSequence/graphic-example-4.ttl> . # -------------------------------------------------------------------------------------
Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.