Extensions for Using Data Elements from FHIR R5 in FHIR R4
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Extensions for Using Data Elements from FHIR R5 in FHIR R4 - Downloaded Version null See the Directory of published versions

Resource Profile: Profile_R5_MolecularSequence_R4 - Mappings

Page standards status: Trial-use Maturity Level: 0

Mappings for the profile-MolecularSequence resource profile.

Mappings to Structures in this Implementation Guide

No Mappings Found

Mappings to other Structures

No Mappings Found

Other Mappings

NameFiveWs Pattern MappingRIM Mappingdoco
.. MolecularSequence
  • Entity. Role
  • or Act
... id
... meta
... implicitRules
... text
Act.text?
... contained
N/A
... Slices for extension
.... extension:focus
.... extension:formatted
.... extension:coordinateSystem
.... extension:ordinalPosition
.... extension:sequenceRange
... modifierExtension
N/A
... identifier
FiveWs.identifier
... type
... coordinateSystem
... patient
.... id
n/a
.... Slices for extension
..... extension:subject
.... reference
N/A
.... type
N/A
.... identifier
.identifier
.... display
N/A
... specimen
... device
... performer
... quantity
... referenceSeq
.... id
n/a
.... Slices for extension
..... extension:genomeAssembly
..... extension:sequence
.... modifierExtension
N/A
.... chromosome
..... id
n/a
..... Slices for extension
...... extension:chromosome
..... coding
  • union(.
  • ./translation)
..... text
./originalText[mediaType/code="text/plain"]/data
.... genomeBuild
.... orientation
.... referenceSeqId
.... referenceSeqPointer
.... referenceSeqString
.... strand
.... windowStart
.... windowEnd
... variant
.... id
n/a
.... Slices for extension
..... extension:start
.... modifierExtension
N/A
.... start
.... end
.... observedAllele
.... referenceAllele
.... cigar
.... variantPointer
... observedSeq
... quality
.... id
n/a
.... extension
n/a
.... modifierExtension
N/A
.... type
.... standardSequence
.... start
.... end
.... score
.... method
.... truthTP
.... queryTP
.... truthFN
.... queryFP
.... gtFP
.... precision
.... recall
.... fScore
.... roc
..... id
n/a
..... extension
n/a
..... modifierExtension
N/A
..... score
..... numTP
..... numFP
..... numFN
..... precision
..... sensitivity
..... fMeasure
... readCoverage
... repository
.... id
n/a
.... extension
n/a
.... modifierExtension
N/A
.... type
.... url
.... name
.... datasetId
.... variantsetId
.... readsetId
... pointer
... structureVariant
.... id
n/a
.... extension
n/a
.... modifierExtension
N/A
.... variantType
.... exact
.... length
.... outer
..... id
n/a
..... extension
n/a
..... modifierExtension
N/A
..... start
..... end
.... inner
..... id
n/a
..... extension
n/a
..... modifierExtension
N/A
..... start
..... end

doco Documentation for this format