Generated Narrative: StructureDefinition ext-R5-SubstanceProtein.subunit Name Flags Card. Type Description & Constraints Extension 0..* Extension(4.0.1) R5: This subclause refers to the description of each subunit constituting the SubstanceProtein. A subunit is a linear sequence of amino acids linked through peptide bonds. The Subunit information shall be provided when the finished SubstanceProtein is a complex of multiple sequences; subunits are not used to delineate domains within a single sequence. Subunits are listed in order of decreasing length; sequences of the same length will be ordered by decreasing molecular weight; subunits that have identical sequences will be repeated multiple times (new) #xD; Slices for extension 0..* Extension Extension Slice: Unordered, Open by value:url #xD; extension:subunit 0..1 Extension R5: Index of primary sequences of amino acids linked through peptide bonds in order of decreasing length. Sequences of the same length will be ordered by molecular weight. Subunits that have identical sequences will be repeated and have sequential subscripts (new) #xD; url 1..1 uri "subunit" #xD; value[x] 0..1 integer Index of primary sequences of amino acids linked through peptide bonds in order of decreasing length. Sequences of the same length will be ordered by molecular weight. Subunits that have identical sequences will be repeated and have sequential subscripts #xD; extension:sequence 0..1 Extension R5: The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence (new) #xD; url 1..1 uri "sequence" #xD; <a href="StructureDefinition-ext-R5-SubstanceProtein.subunit-definitions.html#Extension.extension:sequence.value[x]" title="The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence.">value[x] 0..1 string The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence #xD; extension:length 0..1 Extension R5: Length of linear sequences of amino acids contained in the subunit (new) #xD; url 1..1 uri "length" #xD; value[x] 0..1 integer Length of linear sequences of amino acids contained in the subunit #xD; extension:sequenceAttachment 0..1 Extension R5: The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence (new) #xD; url 1..1 uri "sequenceAttachment" #xD; <a href="StructureDefinition-ext-R5-SubstanceProtein.subunit-definitions.html#Extension.extension:sequenceAttachment.value[x]" title="The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence.">value[x] 0..1 Attachment The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence #xD; extension:nTerminalModificationId 0..1 Extension R5: Unique identifier for molecular fragment modification based on the ISO 11238 Substance ID (new) #xD; url 1..1 uri "nTerminalModificationId" #xD; value[x] 0..1 Identifier Unique identifier for molecular fragment modification based on the ISO 11238 Substance ID #xD; extension:nTerminalModification 0..1 Extension R5: The name of the fragment modified at the N-terminal of the SubstanceProtein shall be specified (new) #xD; url 1..1 uri "nTerminalModification" #xD; value[x] 0..1 string The name of the fragment modified at the N-terminal of the SubstanceProtein shall be specified #xD; extension:cTerminalModificationId 0..1 Extension R5: Unique identifier for molecular fragment modification based on the ISO 11238 Substance ID (new) #xD; url 1..1 uri "cTerminalModificationId" #xD; value[x] 0..1 Identifier Unique identifier for molecular fragment modification based on the ISO 11238 Substance ID #xD; extension:cTerminalModification 0..1 Extension R5: The modification at the C-terminal shall be specified (new) #xD; url 1..1 uri "cTerminalModification" #xD; value[x] 0..1 string The modification at the C-terminal shall be specified #xD; url 1..1 uri "http://hl7.org/fhir/5.0/StructureDefinition/extension-SubstanceProtein.subunit" #xD; value[x] 0..0 Value of extension #xD; Documentation for this format
R5: This subclause refers to the description of each subunit constituting the SubstanceProtein. A subunit is a linear sequence of amino acids linked through peptide bonds. The Subunit information shall be provided when the finished SubstanceProtein is a complex of multiple sequences; subunits are not used to delineate domains within a single sequence. Subunits are listed in order of decreasing length; sequences of the same length will be ordered by decreasing molecular weight; subunits that have identical sequences will be repeated multiple times (new)
R5: `SubstanceProtein.subunit` (new:BackboneElement)
This extension is part of the cross-version definitions generated to enable use of the element `SubstanceProtein.subunit` as defined in FHIR R5 in FHIR R4. The source element is defined as: `SubstanceProtein.subunit` 0..* `BackboneElement` Across FHIR versions, the element set has been mapped as: * R5 `SubstanceProtein.subunit` 0..* `BackboneElement` Following are the generation technical comments: Element `SubstanceProtein.subunit` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
Element `SubstanceProtein.subunit` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
All FHIR elements must have a @value or children
hasValue() or (children().count() > id.count())
Must have either extensions or value[x], not both
exists(f:extension)!=exists(f:*[starts-with(local-name(.), 'value')])
Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
Extensions are always sliced by (at least) url
exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
R5: Index of primary sequences of amino acids linked through peptide bonds in order of decreasing length. Sequences of the same length will be ordered by molecular weight. Subunits that have identical sequences will be repeated and have sequential subscripts (new)
R5: `SubstanceProtein.subunit.subunit` (new:integer)
Element `SubstanceProtein.subunit.subunit` is part of an existing definition because parent element `SubstanceProtein.subunit` requires a cross-version extension. Element `SubstanceProtein.subunit.subunit` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit.subunit` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
Additional content defined by implementations
May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
Source of the definition for the extension code - a logical name or a URL.
The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
Index of primary sequences of amino acids linked through peptide bonds in order of decreasing length. Sequences of the same length will be ordered by molecular weight. Subunits that have identical sequences will be repeated and have sequential subscripts
Index of primary sequences of amino acids linked through peptide bonds in order of decreasing length. Sequences of the same length will be ordered by molecular weight. Subunits that have identical sequences will be repeated and have sequential subscripts.
R5: The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence (new)
R5: `SubstanceProtein.subunit.sequence` (new:string)
Element `SubstanceProtein.subunit.sequence` is part of an existing definition because parent element `SubstanceProtein.subunit` requires a cross-version extension. Element `SubstanceProtein.subunit.sequence` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit.sequence` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence
The sequence information shall be provided enumerating the amino acids from N- to C-terminal end using standard single-letter amino acid codes. Uppercase shall be used for L-amino acids and lowercase for D-amino acids. Transcribed SubstanceProteins will always be described using the translated sequence; for synthetic peptide containing amino acids that are not represented with a single letter code an X should be used within the sequence. The modified amino acids will be distinguished by their position in the sequence.
R5: Length of linear sequences of amino acids contained in the subunit (new)
R5: `SubstanceProtein.subunit.length` (new:integer)
Element `SubstanceProtein.subunit.length` is part of an existing definition because parent element `SubstanceProtein.subunit` requires a cross-version extension. Element `SubstanceProtein.subunit.length` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit.length` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
Length of linear sequences of amino acids contained in the subunit
Length of linear sequences of amino acids contained in the subunit.
R5: `SubstanceProtein.subunit.sequenceAttachment` (new:Attachment)
Element `SubstanceProtein.subunit.sequenceAttachment` is part of an existing definition because parent element `SubstanceProtein.subunit` requires a cross-version extension. Element `SubstanceProtein.subunit.sequenceAttachment` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit.sequenceAttachment` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
R5: Unique identifier for molecular fragment modification based on the ISO 11238 Substance ID (new)
R5: `SubstanceProtein.subunit.nTerminalModificationId` (new:Identifier)
Element `SubstanceProtein.subunit.nTerminalModificationId` is part of an existing definition because parent element `SubstanceProtein.subunit` requires a cross-version extension. Element `SubstanceProtein.subunit.nTerminalModificationId` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit.nTerminalModificationId` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
Unique identifier for molecular fragment modification based on the ISO 11238 Substance ID
Unique identifier for molecular fragment modification based on the ISO 11238 Substance ID.
R5: The name of the fragment modified at the N-terminal of the SubstanceProtein shall be specified (new)
R5: `SubstanceProtein.subunit.nTerminalModification` (new:string)
Element `SubstanceProtein.subunit.nTerminalModification` is part of an existing definition because parent element `SubstanceProtein.subunit` requires a cross-version extension. Element `SubstanceProtein.subunit.nTerminalModification` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit.nTerminalModification` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
The name of the fragment modified at the N-terminal of the SubstanceProtein shall be specified
The name of the fragment modified at the N-terminal of the SubstanceProtein shall be specified.
R5: `SubstanceProtein.subunit.cTerminalModificationId` (new:Identifier)
Element `SubstanceProtein.subunit.cTerminalModificationId` is part of an existing definition because parent element `SubstanceProtein.subunit` requires a cross-version extension. Element `SubstanceProtein.subunit.cTerminalModificationId` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit.cTerminalModificationId` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
R5: The modification at the C-terminal shall be specified (new)
R5: `SubstanceProtein.subunit.cTerminalModification` (new:string)
Element `SubstanceProtein.subunit.cTerminalModification` is part of an existing definition because parent element `SubstanceProtein.subunit` requires a cross-version extension. Element `SubstanceProtein.subunit.cTerminalModification` is not mapped to FHIR R4, since FHIR R5 `SubstanceProtein` is not mapped. Element `SubstanceProtein.subunit.cTerminalModification` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
The modification at the C-terminal shall be specified
The modification at the C-terminal shall be specified.
Value of extension - must be one of a constrained set of the data types (see [Extensibility](http://hl7.org/fhir/R4/extensibility.html) for a list).