ext-R5-GenomicStudy.analysis
type: StructureDefinition
node role: treeRoot
id:
  v: ext-R5-GenomicStudy.analysis
text:
  status:
    v: extensions
  div:
    v: Generated Narrative: StructureDefinition ext-R5-GenomicStudy.analysis Name Flags Card. Type Description & Constraints<img src="[binary]" alt="doco" style="background-color: inherit"/> Extension 0..* Extension(4.0.1) R5: Genomic Analysis Event (new) #xD; Slices for extension 0..* Extension Extension Slice: Unordered, Open by value:url #xD; extension:identifier 0..* Extension R5: Identifiers for the analysis event (new) #xD; url 1..1 uri "identifier" #xD; value[x] 0..1 Identifier Identifiers for the analysis event #xD; extension:methodType 0..* Extension R5: Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) (new) #xD; url 1..1 uri "methodType" #xD; value[x] 0..1 CodeableConcept Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) Binding: R5GenomicstudyMethodtypeForR4 (0.1.0) (example): The method type of the GenomicStudy analysis. #xD; extension:changeType 0..* Extension R5: Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) (new) #xD; url 1..1 uri "changeType" #xD; value[x] 0..1 CodeableConcept Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) Binding: R5GenomicstudyChangetypeForR4 (0.1.0) (example): The change type relevant to GenomicStudy analysis. #xD; extension:genomeBuild 0..1 Extension R5: Genome build that is used in this analysis (new) #xD; url 1..1 uri "genomeBuild" #xD; value[x] 0..1 CodeableConcept Genome build that is used in this analysis #xD; extension:instantiatesCanonical 0..1 Extension R5: The defined protocol that describes the analysis (new) #xD; url 1..1 uri "instantiatesCanonical" #xD; value[x] 0..1 canonical(Cross-version Profile for R5.PlanDefinition for use in FHIR R4(0.1.0) | PlanDefinition | Cross-version Profile for R5.ActivityDefinition for use in FHIR R4(0.1.0) | ActivityDefinition) The defined protocol that describes the analysis #xD; extension:instantiatesUri 0..1 Extension R5: The URL pointing to an externally maintained protocol …
extension:
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    v: fhir
extension:
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      l: packageId
    value: Id
      v: hl7.fhir.uv.xver-r5.r4
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      v: version
      l: version
    value: String
      v: 0.1.0
  extension:
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      v: uri
      l: uri
    value: Uri
      v: http://hl7.org/fhir/uv/xver/ImplementationGuide/hl7.fhir.uv.xver-r5.r4
      l: hl7.fhir.uv.xver-r5.r4
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    l: package-source
extension:
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      v: 4.0
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      v: endFhirVersion
      l: endFhirVersion
    value: Code
      v: 4.0
  url:
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    l: version-specific-use
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    v: 0
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        l: structuredefinition-conformance-derivedFrom
      value: Canonical
        v: http://hl7.org/fhir/uv/xver/ImplementationGuide/hl7.fhir.uv.xver-r5.r4
        l: hl7.fhir.uv.xver-r5.r4
extension:
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    l: structuredefinition-standards-status
  value: Code
    v: trial-use
    extension:
      url:
        v: http://hl7.org/fhir/StructureDefinition/structuredefinition-conformance-derivedFrom
        l: structuredefinition-conformance-derivedFrom
      value: Canonical
        v: http://hl7.org/fhir/uv/xver/ImplementationGuide/hl7.fhir.uv.xver-r5.r4
        l: hl7.fhir.uv.xver-r5.r4
url:
  v: http://hl7.org/fhir/5.0/StructureDefinition/extension-GenomicStudy.analysis
  l: extension-GenomicStudy.analysis
version:
  v: 0.1.0
name:
  v: ExtensionGenomicStudy_Analysis
title:
  v: R5: Genomic Analysis Event (new)
status:
  v: active
experimental:
  v: false
date:
  v: 2026-03-17T21:02:03.8104715+00:00
publisher:
  v: FHIR Infrastructure
contact:
  name:
    v: FHIR Infrastructure
  telecom:
    system:
      v: url
    value:
      v: http://www.hl7.org/Special/committees/fiwg
description:
  v: R5: `GenomicStudy.analysis` (new:BackboneElement)
jurisdiction:
  coding:
    system:
      v: http://unstats.un.org/unsd/methods/m49/m49.htm
      l: m49.htm
    code:
      v: 001
    display:
      v: World
purpose:
  v: This extension is part of the cross-version definitions generated to enable use of the element `GenomicStudy.analysis` as defined in FHIR R5 in FHIR R4. The source element is defined as: `GenomicStudy.analysis` 0..* `BackboneElement` Across FHIR versions, the element set has been mapped as: * R5 `GenomicStudy.analysis` 0..* `BackboneElement` Following are the generation technical comments: Element `GenomicStudy.analysis` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
fhir version:
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      v: R5: `GenomicStudy.analysis` (new:BackboneElement)
    comment:
      v: Element `GenomicStudy.analysis` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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v: false

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      v: string
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is modifier:
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id:
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    path:
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  description:
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definition:
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  human:
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id:
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path:
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slice name:
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short:
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definition:
  v: R5: `GenomicStudy.analysis.identifier` (new:Identifier)
comment:
  v: Element `GenomicStudy.analysis.identifier` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.identifier` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.identifier` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.identifier` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.identifier` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.identifier` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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id:
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  description:
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short:
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definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
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id:
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short:
  v: identifies the meaning of the extension
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  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
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fixed: Uri
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mapping:
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id:
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is modifier:
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id:
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path:
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slice name:
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short:
  v: R5: Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) (new)
definition:
  v: R5: `GenomicStudy.analysis.methodType` (new:CodeableConcept)
comment:
  v: Element `GenomicStudy.analysis.methodType` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.methodType` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.methodType` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.methodType` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.methodType` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.methodType` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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id:
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slicing:
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  description:
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short:
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definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
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constraint:
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id:
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path:
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representation:
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short:
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definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
min:
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type:
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fixed: Uri
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mapping:
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id:
  v: Extension.extension:methodType.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI)
definition:
  v: Type of the methods used in the analysis, e.g., Fluorescence in situ hybridization (FISH), Karyotyping, or Microsatellite instability testing (MSI).
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is summary:
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    v: The method type of the GenomicStudy analysis.
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comment:
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requirements:
  v: Element `GenomicStudy.analysis.changeType` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.changeType` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.changeType` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
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id:
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requirements:
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  v: Additional content defined by implementations
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requirements:
  v: Element `GenomicStudy.analysis.instantiatesCanonical` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.instantiatesCanonical` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.instantiatesCanonical` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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id:
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    v: N/A

id:
  v: Extension.extension:instantiatesUri
path:
  v: Extension.extension
slice name:
  v: instantiatesUri
short:
  v: R5: The URL pointing to an externally maintained protocol that describes the analysis (new)
definition:
  v: R5: `GenomicStudy.analysis.instantiatesUri` (new:uri)
comment:
  v: Element `GenomicStudy.analysis.instantiatesUri` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.instantiatesUri` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.instantiatesUri` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.instantiatesUri` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.instantiatesUri` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.instantiatesUri` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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  v: 0
max:
  v: 1
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    v: *
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    l: Extension
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  key:
    v: ele-1
  severity:
    v: error
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    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
  v: false
is summary:
  v: false

id:
  v: Extension.extension:instantiatesUri.id
path:
  v: Extension.extension.id
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  v: xmlAttr
short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
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  v: 0
max:
  v: 1
base:
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type:
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    value: Url
      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
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is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
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path:
  v: Extension.extension.extension
slicing:
  discriminator:
    type:
      v: value
    path:
      v: url
  description:
    v: Extensions are always sliced by (at least) url
  rules:
    v: open
short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
alias:
  v: extensions
alias:
  v: user content
min:
  v: 0
max:
  v: *
base:
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    v: 0
  max:
    v: *
type:
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    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
  source:
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
  v: Extension.extension:instantiatesUri.url
path:
  v: Extension.extension.url
representation:
  v: xmlAttr
short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
min:
  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
type:
  extension:
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      v: uri
      l: uri
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
fixed: Uri
  v: instantiatesUri
  l: instantiatesUri
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:instantiatesUri.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: The URL pointing to an externally maintained protocol that describes the analysis
definition:
  v: The URL pointing to an externally maintained protocol that describes the analysis.
min:
  v: 0
max:
  v: 1
base:
  path:
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  min:
    v: 0
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    v: 1
type:
  code:
    v: uri
    l: uri
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  key:
    v: ele-1
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    v: error
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    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
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  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:title
path:
  v: Extension.extension
slice name:
  v: title
short:
  v: R5: Name of the analysis event (human friendly) (new)
definition:
  v: R5: `GenomicStudy.analysis.title` (new:string)
comment:
  v: Element `GenomicStudy.analysis.title` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.title` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.title` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.title` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.title` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.title` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
min:
  v: 0
max:
  v: 1
base:
  path:
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    v: *
type:
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    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
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    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
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    v: http://hl7.org/fhir/StructureDefinition/Extension|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
  v: false
is summary:
  v: false

id:
  v: Extension.extension:title.id
path:
  v: Extension.extension.id
representation:
  v: xmlAttr
short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
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  v: 0
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  v: 1
base:
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    v: 0
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    v: 1
type:
  extension:
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      l: structuredefinition-fhir-type
    value: Url
      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
  v: Extension.extension:title.extension
path:
  v: Extension.extension.extension
slicing:
  discriminator:
    type:
      v: value
    path:
      v: url
  description:
    v: Extensions are always sliced by (at least) url
  rules:
    v: open
short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
alias:
  v: extensions
alias:
  v: user content
min:
  v: 0
max:
  v: *
base:
  path:
    v: Element.extension
  min:
    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
  source:
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
  v: Extension.extension:title.url
path:
  v: Extension.extension.url
representation:
  v: xmlAttr
short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
min:
  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
type:
  extension:
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      l: structuredefinition-fhir-type
    value: Url
      v: uri
      l: uri
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
fixed: Uri
  v: title
  l: title
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:title.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: Name of the analysis event (human friendly)
definition:
  v: Name of the analysis event (human friendly).
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
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    v: 1
type:
  code:
    v: string
    l: string
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
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    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:focus
path:
  v: Extension.extension
slice name:
  v: focus
short:
  v: R5: What the genomic analysis is about, when it is not about the subject of record (new)
definition:
  v: R5: `GenomicStudy.analysis.focus` (new:Reference(Resource))
comment:
  v: Element `GenomicStudy.analysis.focus` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.focus` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.focus` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element). If the focus of the analysis is not known, the value of this field SHALL use the data absent extension.
requirements:
  v: Element `GenomicStudy.analysis.focus` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.focus` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.focus` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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  v: 0
max:
  v: *
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  min:
    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
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    l: http://hl7.org/fhir/StructureDefinition/Extension
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is summary:
  v: false

id:
  v: Extension.extension:focus.id
path:
  v: Extension.extension.id
representation:
  v: xmlAttr
short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
min:
  v: 0
max:
  v: 1
base:
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    v: Element.id
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    v: 0
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    v: 1
type:
  extension:
    url:
      v: http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type
      l: structuredefinition-fhir-type
    value: Url
      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
  v: Extension.extension:focus.extension
path:
  v: Extension.extension.extension
slicing:
  discriminator:
    type:
      v: value
    path:
      v: url
  description:
    v: Extensions are always sliced by (at least) url
  rules:
    v: open
short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
alias:
  v: extensions
alias:
  v: user content
min:
  v: 0
max:
  v: *
base:
  path:
    v: Element.extension
  min:
    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
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  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
  source:
    v: http://hl7.org/fhir/StructureDefinition/Extension|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
  v: Extension.extension:focus.url
path:
  v: Extension.extension.url
representation:
  v: xmlAttr
short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
min:
  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
type:
  extension:
    url:
      v: http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type
      l: structuredefinition-fhir-type
    value: Url
      v: uri
      l: uri
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
fixed: Uri
  v: focus
  l: focus
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:focus.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: What the genomic analysis is about, when it is not about the subject of record
definition:
  v: The focus of a genomic analysis when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, child, or sibling. For example, in trio testing, the GenomicStudy.subject would be the child (proband) and the GenomicStudy.analysis.focus of a specific analysis would be the parent.
comment:
  v: If the focus of the analysis is not known, the value of this field SHALL use the data absent extension.
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1
type:
  code:
    v: Reference
    l: Reference
  target profile:
    v: http://hl7.org/fhir/5.0/StructureDefinition/profile-Resource|0.1.0
    l: http://hl7.org/fhir/5.0/StructureDefinition/profile-Resource
  target profile:
    v: http://hl7.org/fhir/StructureDefinition/Resource|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Resource
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:specimen
path:
  v: Extension.extension
slice name:
  v: specimen
short:
  v: R5: The specimen used in the analysis event (new)
definition:
  v: R5: `GenomicStudy.analysis.specimen` (new:Reference(Specimen))
comment:
  v: Element `GenomicStudy.analysis.specimen` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.specimen` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.specimen` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.specimen` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.specimen` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.specimen` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
min:
  v: 0
max:
  v: *
base:
  path:
    v: Element.extension
  min:
    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
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    v: http://hl7.org/fhir/StructureDefinition/Extension|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
  v: false
is summary:
  v: false

id:
  v: Extension.extension:specimen.id
path:
  v: Extension.extension.id
representation:
  v: xmlAttr
short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Element.id
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    v: 0
  max:
    v: 1
type:
  extension:
    url:
      v: http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type
      l: structuredefinition-fhir-type
    value: Url
      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
  v: Extension.extension:specimen.extension
path:
  v: Extension.extension.extension
slicing:
  discriminator:
    type:
      v: value
    path:
      v: url
  description:
    v: Extensions are always sliced by (at least) url
  rules:
    v: open
short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
alias:
  v: extensions
alias:
  v: user content
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  v: 0
max:
  v: *
base:
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    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
  source:
    v: http://hl7.org/fhir/StructureDefinition/Extension|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
  v: Extension.extension:specimen.url
path:
  v: Extension.extension.url
representation:
  v: xmlAttr
short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
min:
  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
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type:
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      l: structuredefinition-fhir-type
    value: Url
      v: uri
      l: uri
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
fixed: Uri
  v: specimen
  l: specimen
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:specimen.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: The specimen used in the analysis event
definition:
  v: The specimen used in the analysis event.
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1
type:
  code:
    v: Reference
    l: Reference
  target profile:
    v: http://hl7.org/fhir/5.0/StructureDefinition/profile-Specimen|0.1.0
    l: http://hl7.org/fhir/5.0/StructureDefinition/profile-Specimen
  target profile:
    v: http://hl7.org/fhir/StructureDefinition/Specimen|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Specimen
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:date
path:
  v: Extension.extension
slice name:
  v: date
short:
  v: R5: The date of the analysis event (new)
definition:
  v: R5: `GenomicStudy.analysis.date` (new:dateTime)
comment:
  v: Element `GenomicStudy.analysis.date` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.date` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.date` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.date` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.date` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.date` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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  v: 1
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    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
  source:
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
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is summary:
  v: false

id:
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path:
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representation:
  v: xmlAttr
short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
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  v: 0
max:
  v: 1
base:
  path:
    v: Element.id
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    v: 0
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    v: 1
type:
  extension:
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      v: http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type
      l: structuredefinition-fhir-type
    value: Url
      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
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path:
  v: Extension.extension.extension
slicing:
  discriminator:
    type:
      v: value
    path:
      v: url
  description:
    v: Extensions are always sliced by (at least) url
  rules:
    v: open
short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
alias:
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alias:
  v: user content
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  v: 0
max:
  v: *
base:
  path:
    v: Element.extension
  min:
    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
  source:
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
  v: Extension.extension:date.url
path:
  v: Extension.extension.url
representation:
  v: xmlAttr
short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
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  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
type:
  extension:
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      v: http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type
      l: structuredefinition-fhir-type
    value: Url
      v: uri
      l: uri
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
fixed: Uri
  v: date
  l: date
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:date.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: The date of the analysis event
definition:
  v: The date of the analysis event.
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  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1
type:
  code:
    v: dateTime
    l: dateTime
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:note
path:
  v: Extension.extension
slice name:
  v: note
short:
  v: R5: Any notes capture with the analysis event (new)
definition:
  v: R5: `GenomicStudy.analysis.note` (new:Annotation)
comment:
  v: Element `GenomicStudy.analysis.note` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.note` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.note` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.note` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.note` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.note` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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  v: 0
max:
  v: *
base:
  path:
    v: Element.extension
  min:
    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
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    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
  source:
    v: http://hl7.org/fhir/StructureDefinition/Extension|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
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is summary:
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id:
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path:
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representation:
  v: xmlAttr
short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
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  v: 0
max:
  v: 1
base:
  path:
    v: Element.id
  min:
    v: 0
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    v: 1
type:
  extension:
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      v: http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type
      l: structuredefinition-fhir-type
    value: Url
      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
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path:
  v: Extension.extension.extension
slicing:
  discriminator:
    type:
      v: value
    path:
      v: url
  description:
    v: Extensions are always sliced by (at least) url
  rules:
    v: open
short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
alias:
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alias:
  v: user content
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  v: 0
max:
  v: *
base:
  path:
    v: Element.extension
  min:
    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
  source:
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
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is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
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path:
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representation:
  v: xmlAttr
short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
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max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
type:
  extension:
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      v: http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type
      l: structuredefinition-fhir-type
    value: Url
      v: uri
      l: uri
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
fixed: Uri
  v: note
  l: note
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:note.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: Any notes capture with the analysis event
definition:
  v: Any notes capture with the analysis event.
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1
type:
  code:
    v: Annotation
    l: Annotation
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:protocolPerformed
path:
  v: Extension.extension
slice name:
  v: protocolPerformed
short:
  v: R5: The protocol that was performed for the analysis event (new)
definition:
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comment:
  v: Element `GenomicStudy.analysis.protocolPerformed` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.protocolPerformed` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.protocolPerformed` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.protocolPerformed` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.protocolPerformed` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.protocolPerformed` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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  v: 0
max:
  v: 1
base:
  path:
    v: Element.extension
  min:
    v: 0
  max:
    v: *
type:
  code:
    v: Extension
    l: Extension
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
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    v: http://hl7.org/fhir/StructureDefinition/Extension|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
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is summary:
  v: false

id:
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path:
  v: Extension.extension.id
representation:
  v: xmlAttr
short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
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  v: 0
max:
  v: 1
base:
  path:
    v: Element.id
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    v: 0
  max:
    v: 1
type:
  extension:
    url:
      v: http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type
      l: structuredefinition-fhir-type
    value: Url
      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
  v: Extension.extension:protocolPerformed.extension
path:
  v: Extension.extension.extension
slicing:
  discriminator:
    type:
      v: value
    path:
      v: url
  description:
    v: Extensions are always sliced by (at least) url
  rules:
    v: open
short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
alias:
  v: extensions
alias:
  v: user content
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    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
  xpath:
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    l: http://hl7.org/fhir/StructureDefinition/Extension
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is summary:
  v: false

id:
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path:
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slice name:
  v: file
short:
  v: R5: File containing input data (new)
definition:
  v: R5: `GenomicStudy.analysis.input.file` (new:Reference(DocumentReference))
comment:
  v: Element `GenomicStudy.analysis.input.file` is part of an existing definition because parent element `GenomicStudy.analysis.input` requires a cross-version extension. Element `GenomicStudy.analysis.input.file` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.input.file` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.input.file` is part of an existing definition because parent element `GenomicStudy.analysis.input` requires a cross-version extension. Element `GenomicStudy.analysis.input.file` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.input.file` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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    v: hasValue() or (children().count() > id.count())
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    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
  human:
    v: Must have either extensions or value[x], not both
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    l: http://hl7.org/fhir/StructureDefinition/Extension
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is summary:
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id:
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path:
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short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
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  v: 0
max:
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type:
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    value: Url
      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
is modifier:
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  v: false
mapping:
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    v: rim
  map:
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id:
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path:
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slicing:
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    type:
      v: value
    path:
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  description:
    v: Extensions are always sliced by (at least) url
  rules:
    v: open
short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
alias:
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alias:
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    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
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  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
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    v: Must have either extensions or value[x], not both
  expression:
    v: extension.exists() != value.exists()
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    v: exists(f:extension)!=exists(f:*[starts-with(local-name(.), "value")])
  source:
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
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is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
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id:
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path:
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representation:
  v: xmlAttr
short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
min:
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max:
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base:
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  min:
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  max:
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type:
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      v: uri
      l: uri
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
fixed: Uri
  v: file
  l: file
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:input.extension:file.value[x]
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  v: File containing input data
definition:
  v: File containing input data.
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base:
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    l: http://hl7.org/fhir/5.0/StructureDefinition/profile-DocumentReference-for-Media
  target profile:
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    l: http://hl7.org/fhir/StructureDefinition/Media
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
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    l: http://hl7.org/fhir/StructureDefinition/Element
is modifier:
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is summary:
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mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
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path:
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slice name:
  v: type
short:
  v: R5: Type of input data (e.g., BAM, CRAM, or FASTA) (new)
definition:
  v: R5: `GenomicStudy.analysis.input.type` (new:CodeableConcept)
comment:
  v: Element `GenomicStudy.analysis.input.type` is part of an existing definition because parent element `GenomicStudy.analysis.input` requires a cross-version extension. Element `GenomicStudy.analysis.input.type` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.input.type` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.input.type` is part of an existing definition because parent element `GenomicStudy.analysis.input` requires a cross-version extension. Element `GenomicStudy.analysis.input.type` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.input.type` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
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    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
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    v: ext-1
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    v: error
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
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is summary:
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id:
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path:
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short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
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  v: 0
max:
  v: 1
base:
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    v: Element.id
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type:
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      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
is modifier:
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is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
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path:
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slicing:
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      v: value
    path:
      v: url
  description:
    v: Extensions are always sliced by (at least) url
  rules:
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short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
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alias:
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    v: error
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  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
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  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
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    v: ext-1
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    v: error
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    v: Must have either extensions or value[x], not both
  expression:
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
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path:
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representation:
  v: xmlAttr
short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
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max:
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  min:
    v: 1
  max:
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type:
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      l: structuredefinition-fhir-type
    value: Url
      v: uri
      l: uri
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
fixed: Uri
  v: type
  l: type
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:input.extension:type.value[x]
path:
  v: Extension.extension.extension.value[x]
short:
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definition:
  v: Type of input data, e.g., BAM, CRAM, or FASTA.
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  v: 1
base:
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  min:
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type:
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    l: CodeableConcept
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
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  source:
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    l: http://hl7.org/fhir/StructureDefinition/Element
is modifier:
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is summary:
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binding:
  strength:
    v: example
  description:
    v: The data format of the data file.
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    l: http://hl7.org/fhir/uv/xver/ValueSet/R5-genomicstudy-dataformat-for-R4
mapping:
  identity:
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  map:
    v: N/A

id:
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path:
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slice name:
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short:
  v: R5: The analysis event or other GenomicStudy that generated this input file (new)
definition:
  v: R5: `GenomicStudy.analysis.input.generatedBy[x]` (new:Identifier, Reference(GenomicStudy))
comment:
  v: Element `GenomicStudy.analysis.input.generatedBy[x]` is part of an existing definition because parent element `GenomicStudy.analysis.input` requires a cross-version extension. Element `GenomicStudy.analysis.input.generatedBy[x]` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.input.generatedBy[x]` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.input.generatedBy[x]` is part of an existing definition because parent element `GenomicStudy.analysis.input` requires a cross-version extension. Element `GenomicStudy.analysis.input.generatedBy[x]` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.input.generatedBy[x]` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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  expression:
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  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
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    l: http://hl7.org/fhir/StructureDefinition/Extension
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is summary:
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id:
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  v: xmlAttr
short:
  v: Unique id for inter-element referencing
definition:
  v: Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.
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max:
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base:
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type:
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      l: structuredefinition-fhir-type
    value: Url
      v: string
      l: string
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
is modifier:
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is summary:
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mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
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slicing:
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      v: value
    path:
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  description:
    v: Extensions are always sliced by (at least) url
  rules:
    v: open
short:
  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
alias:
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alias:
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max:
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base:
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type:
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    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
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  source:
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    l: http://hl7.org/fhir/StructureDefinition/Element
constraint:
  key:
    v: ext-1
  severity:
    v: error
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    v: Must have either extensions or value[x], not both
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    l: http://hl7.org/fhir/StructureDefinition/Extension
is modifier:
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is summary:
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mapping:
  identity:
    v: rim
  map:
    v: n/a

id:
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path:
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representation:
  v: xmlAttr
short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
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max:
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  min:
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  max:
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type:
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      l: structuredefinition-fhir-type
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      v: uri
      l: uri
  code:
    v: http://hl7.org/fhirpath/System.String
    l: System.String
fixed: Uri
  v: generatedBy
  l: generatedBy
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
  v: Extension.extension:input.extension:generatedBy.value[x]
path:
  v: Extension.extension.extension.value[x]
short:
  v: The analysis event or other GenomicStudy that generated this input file
definition:
  v: The analysis event or other GenomicStudy that generated this input file.
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base:
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  min:
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  max:
    v: 1
type:
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    l: Identifier
type:
  code:
    v: Reference
    l: Reference
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    l: http://hl7.org/fhir/5.0/StructureDefinition/profile-GenomicStudy
  target profile:
    v: http://hl7.org/fhir/StructureDefinition/Basic|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Basic
constraint:
  key:
    v: ele-1
  severity:
    v: error
  human:
    v: All FHIR elements must have a @value or children
  expression:
    v: hasValue() or (children().count() > id.count())
  xpath:
    v: @value|f:*|h:div
  source:
    v: http://hl7.org/fhir/StructureDefinition/Element|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Element
is modifier:
  v: false
is summary:
  v: false
mapping:
  identity:
    v: rim
  map:
    v: N/A

id:
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path:
  v: Extension.extension.url
representation:
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code:
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requirements:
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requirements:
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    v: boolean
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code:
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code:
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code:
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code:
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v: false

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id:
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requirements:
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id:
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comment:
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requirements:
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  v: Additional content defined by implementations
definition:
  v: May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
comment:
  v: There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.
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alias:
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    l: Extension
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id:
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path:
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representation:
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short:
  v: identifies the meaning of the extension
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  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
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  v: identifies the meaning of the extension
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  v: Source of the definition for the extension code - a logical name or a URL.
comment:
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path:
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code:
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code:
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  l: UsageContext

code:
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code:
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v: false

identity:
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id:
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short:
  v: identifies the meaning of the extension
definition:
  v: Source of the definition for the extension code - a logical name or a URL.
comment:
  v: The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.
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fixed: Uri
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  v: false
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short:
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definition:
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v: false

v: false

identity:
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map:
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element:
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  path:
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  comment:
    v: Element `GenomicStudy.analysis` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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      path:
        v: url
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element:
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    v: Element `GenomicStudy.analysis.identifier` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.identifier` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.identifier` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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  definition:
    v: Identifiers for the analysis event.
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element:
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  path:
    v: Extension.extension
  slice name:
    v: methodType
  short:
    v: R5: Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI) (new)
  definition:
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  comment:
    v: Element `GenomicStudy.analysis.methodType` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.methodType` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.methodType` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
  requirements:
    v: Element `GenomicStudy.analysis.methodType` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.methodType` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.methodType` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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element:
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element:
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  short:
    v: Type of the methods used in the analysis (e.g., FISH, Karyotyping, MSI)
  definition:
    v: Type of the methods used in the analysis, e.g., Fluorescence in situ hybridization (FISH), Karyotyping, or Microsatellite instability testing (MSI).
  min:
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    description:
      v: The method type of the GenomicStudy analysis.
    value set:
      v: http://hl7.org/fhir/uv/xver/ValueSet/R5-genomicstudy-methodtype-for-R4|0.1.0
      l: http://hl7.org/fhir/uv/xver/ValueSet/R5-genomicstudy-methodtype-for-R4
element:
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    v: Extension.extension:changeType
  path:
    v: Extension.extension

v: changeType

v: R5: Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change) (new)

v: R5: `GenomicStudy.analysis.changeType` (new:CodeableConcept)

v: Element `GenomicStudy.analysis.changeType` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.changeType` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.changeType` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).

v: Element `GenomicStudy.analysis.changeType` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.changeType` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.changeType` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).

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v: *

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max:
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id:
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max:
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fixed: Uri
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id:
  v: Extension.extension:changeType.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: Type of the genomic changes studied in the analysis (e.g., DNA, RNA, or AA change)
definition:
  v: Type of the genomic changes studied in the analysis, e.g., DNA, RNA, or amino acid change.
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  v: 0
max:
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type:
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binding:
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    v: example
  description:
    v: The change type relevant to GenomicStudy analysis.
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    v: http://hl7.org/fhir/uv/xver/ValueSet/R5-genomicstudy-changetype-for-R4|0.1.0
    l: http://hl7.org/fhir/uv/xver/ValueSet/R5-genomicstudy-changetype-for-R4

id:
  v: Extension.extension:genomeBuild
path:
  v: Extension.extension
slice name:
  v: genomeBuild
short:
  v: R5: Genome build that is used in this analysis (new)
definition:
  v: R5: `GenomicStudy.analysis.genomeBuild` (new:CodeableConcept)
comment:
  v: Element `GenomicStudy.analysis.genomeBuild` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.genomeBuild` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.genomeBuild` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.genomeBuild` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.genomeBuild` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.genomeBuild` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
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max:
  v: 1
base:
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    v: Extension.extension
  min:
    v: 0
  max:
    v: *

id:
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path:
  v: Extension.extension.url
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  v: 1
max:
  v: 1
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  path:
    v: Extension.url
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    v: 1
  max:
    v: 1
fixed: Uri
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  l: genomeBuild

id:
  v: Extension.extension:genomeBuild.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: Genome build that is used in this analysis
definition:
  v: The reference genome build that is used in this analysis.
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1
type:
  code:
    v: CodeableConcept
    l: CodeableConcept

id:
  v: Extension.extension:instantiatesCanonical
path:
  v: Extension.extension
slice name:
  v: instantiatesCanonical
short:
  v: R5: The defined protocol that describes the analysis (new)
definition:
  v: R5: `GenomicStudy.analysis.instantiatesCanonical` (new:canonical(PlanDefinition,ActivityDefinition))
comment:
  v: Element `GenomicStudy.analysis.instantiatesCanonical` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.instantiatesCanonical` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.instantiatesCanonical` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.instantiatesCanonical` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.instantiatesCanonical` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.instantiatesCanonical` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.extension
  min:
    v: 0
  max:
    v: *

id:
  v: Extension.extension:instantiatesCanonical.url
path:
  v: Extension.extension.url
min:
  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
fixed: Uri
  v: instantiatesCanonical
  l: instantiatesCanonical

id:
  v: Extension.extension:instantiatesCanonical.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: The defined protocol that describes the analysis
definition:
  v: The defined protocol that describes the analysis.
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1
type:
  code:
    v: canonical
    l: canonical
  target profile:
    v: http://hl7.org/fhir/5.0/StructureDefinition/profile-PlanDefinition|0.1.0
    l: http://hl7.org/fhir/5.0/StructureDefinition/profile-PlanDefinition
  target profile:
    v: http://hl7.org/fhir/StructureDefinition/PlanDefinition|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/PlanDefinition
  target profile:
    v: http://hl7.org/fhir/5.0/StructureDefinition/profile-ActivityDefinition|0.1.0
    l: http://hl7.org/fhir/5.0/StructureDefinition/profile-ActivityDefinition
  target profile:
    v: http://hl7.org/fhir/StructureDefinition/ActivityDefinition|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/ActivityDefinition

id:
  v: Extension.extension:instantiatesUri
path:
  v: Extension.extension
slice name:
  v: instantiatesUri
short:
  v: R5: The URL pointing to an externally maintained protocol that describes the analysis (new)
definition:
  v: R5: `GenomicStudy.analysis.instantiatesUri` (new:uri)
comment:
  v: Element `GenomicStudy.analysis.instantiatesUri` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.instantiatesUri` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.instantiatesUri` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.instantiatesUri` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.instantiatesUri` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.instantiatesUri` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.extension
  min:
    v: 0
  max:
    v: *

id:
  v: Extension.extension:instantiatesUri.url
path:
  v: Extension.extension.url
min:
  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
fixed: Uri
  v: instantiatesUri
  l: instantiatesUri

id:
  v: Extension.extension:instantiatesUri.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: The URL pointing to an externally maintained protocol that describes the analysis
definition:
  v: The URL pointing to an externally maintained protocol that describes the analysis.
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1
type:
  code:
    v: uri
    l: uri

id:
  v: Extension.extension:title
path:
  v: Extension.extension
slice name:
  v: title
short:
  v: R5: Name of the analysis event (human friendly) (new)
definition:
  v: R5: `GenomicStudy.analysis.title` (new:string)
comment:
  v: Element `GenomicStudy.analysis.title` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.title` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.title` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.title` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.title` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.title` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.extension
  min:
    v: 0
  max:
    v: *

id:
  v: Extension.extension:title.url
path:
  v: Extension.extension.url
min:
  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
fixed: Uri
  v: title
  l: title

id:
  v: Extension.extension:title.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: Name of the analysis event (human friendly)
definition:
  v: Name of the analysis event (human friendly).
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1
type:
  code:
    v: string
    l: string

id:
  v: Extension.extension:focus
path:
  v: Extension.extension
slice name:
  v: focus
short:
  v: R5: What the genomic analysis is about, when it is not about the subject of record (new)
definition:
  v: R5: `GenomicStudy.analysis.focus` (new:Reference(Resource))
comment:
  v: Element `GenomicStudy.analysis.focus` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.focus` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.focus` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element). If the focus of the analysis is not known, the value of this field SHALL use the data absent extension.
requirements:
  v: Element `GenomicStudy.analysis.focus` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.focus` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.focus` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
min:
  v: 0
max:
  v: *
base:
  path:
    v: Extension.extension
  min:
    v: 0
  max:
    v: *

id:
  v: Extension.extension:focus.url
path:
  v: Extension.extension.url
min:
  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
fixed: Uri
  v: focus
  l: focus

id:
  v: Extension.extension:focus.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: What the genomic analysis is about, when it is not about the subject of record
definition:
  v: The focus of a genomic analysis when it is not the patient of record representing something or someone associated with the patient such as a spouse, parent, child, or sibling. For example, in trio testing, the GenomicStudy.subject would be the child (proband) and the GenomicStudy.analysis.focus of a specific analysis would be the parent.
comment:
  v: If the focus of the analysis is not known, the value of this field SHALL use the data absent extension.
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1
type:
  code:
    v: Reference
    l: Reference
  target profile:
    v: http://hl7.org/fhir/5.0/StructureDefinition/profile-Resource|0.1.0
    l: http://hl7.org/fhir/5.0/StructureDefinition/profile-Resource
  target profile:
    v: http://hl7.org/fhir/StructureDefinition/Resource|4.0.1
    l: http://hl7.org/fhir/StructureDefinition/Resource

id:
  v: Extension.extension:specimen
path:
  v: Extension.extension
slice name:
  v: specimen
short:
  v: R5: The specimen used in the analysis event (new)
definition:
  v: R5: `GenomicStudy.analysis.specimen` (new:Reference(Specimen))
comment:
  v: Element `GenomicStudy.analysis.specimen` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.specimen` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.specimen` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
requirements:
  v: Element `GenomicStudy.analysis.specimen` is part of an existing definition because parent element `GenomicStudy.analysis` requires a cross-version extension. Element `GenomicStudy.analysis.specimen` is not mapped to FHIR R4, since FHIR R5 `GenomicStudy` is not mapped. Element `GenomicStudy.analysis.specimen` has no mapping targets in FHIR R4. Typically, this is because the element has been added (is a new element).
min:
  v: 0
max:
  v: *
base:
  path:
    v: Extension.extension
  min:
    v: 0
  max:
    v: *

id:
  v: Extension.extension:specimen.url
path:
  v: Extension.extension.url
min:
  v: 1
max:
  v: 1
base:
  path:
    v: Extension.url
  min:
    v: 1
  max:
    v: 1
fixed: Uri
  v: specimen
  l: specimen

id:
  v: Extension.extension:specimen.value[x]
path:
  v: Extension.extension.value[x]
short:
  v: The specimen used in the analysis event
definition:
  v: The specimen used in the analysis event.
min:
  v: 0
max:
  v: 1
base:
  path:
    v: Extension.value[x]
  min:
    v: 0
  max:
    v: 1