Extensions for Using Data Elements from FHIR R5 in FHIR STU3 - Downloaded Version null See the Directory of published versions
| Official URL: http://hl7.org/fhir/uv/xver/ValueSet/R5-genomicstudy-methodtype-for-R3 | Version: 0.1.0 | |||
| Standards status: Trial-use | Maturity Level: 1 | Responsible: Clinical Genomics | Computable Name: R5GenomicstudyMethodtypeForR3 | |
This cross-version ValueSet represents content from http://hl7.org/fhir/ValueSet/genomicstudy-methodtype|5.0.0 for use in FHIR STU3.
This value set is part of the cross-version definitions generated to enable use of the
value set http://hl7.org/fhir/ValueSet/genomicstudy-methodtype|5.0.0 as defined in FHIR R5
in FHIR STU3.
The source value set is bound to the following FHIR R5 elements:
GenomicStudy.analysis.methodTypeNote that all concepts are included in this cross-version definition because no concepts have compatible representations
Following are the generation technical comments:
FHIR ValueSet http://hl7.org/fhir/ValueSet/genomicstudy-methodtype|5.0.0, defined in FHIR R5 does not have any mapping to FHIR STU3
References
http://hl7.org/fhir/genomicstudy-methodtype version 📍5.0.0| Code | Display |
| alternative-splicing-detection | Alternative splicing detection |
| analyte | Analyte |
| aspe | Allele-specific primer extension (ASPE) |
| bi-directional-sanger-sequence-analysis | Bi-directional Sanger Sequence Analysis |
| biochemical-genetics | Biochemical Genetics |
| c-banding | C-banding |
| chromatin-immunoprecipitation-on-chip | Chromatin Immunoprecipitation on ChIP |
| chromosome-breakage-studies | Chromosome breakage studies |
| cia | Chemiluminescent Immunoassay (CIA) |
| comparative-genomic-hybridization | Comparative Genomic Hybridization |
| cytogenetics | Cytogenetics |
| damid | DamID |
| deletion-duplication-analysis | Deletion/duplication analysis |
| detection-of-homozygosity | Detection of homozygosity |
| digital-microfluidic-microspheres | Digital microfluidic microspheres |
| digital-virtual-karyotyping | Digital / Virtual karyotyping |
| elisa | Enzyme-Linked Immunosorbent Assays (ELISA) |
| enzymatic-levels | Enzymatic levels |
| enzyme-activity | Enzyme activity |
| enzyme-assay | Enzyme assay |
| fish | Fluorescence in situ hybridization (FISH) |
| fish-interphase | FISH-interphase |
| fish-metaphase | FISH-metaphase |
| flow-cytometry | Flow cytometry |
| fluorometry | Fluorometry |
| fusion-genes-microarrays | Fusion genes microarrays |
| g-banding | G-banding |
| gc-ms | Gas chromatography–mass spectrometry (GC-MS) |
| gene-expression-profiling | Gene expression profiling |
| gene-id | GeneID |
| gold-nanoparticle-probe-technology | Gold nanoparticle probe technology |
| hplc | High-performance liquid chromatography (HPLC) |
| immunohistochemistry | Immunohistochemistry |
| karyotyping | Karyotyping |
| lc-ms | Liquid chromatography mass spectrometry (LC-MS) |
| lc-ms-ms | Liquid chromatography-tandem mass spectrometry (LC-MS/MS) |
| linkage-analysis | Linkage analysis |
| m-fish | Multicolor FISH (M-FISH) |
| metabolite-levels | Metabolite levels |
| methylation-analysis | Methylation analysis |
| methylation-specific-pcr | Methylation-specific PCR |
| microarray | Microarray |
| mlpa | Multiplex Ligation-dependent Probe Amplification (MLPA) |
| molecular-genetics | Molecular Genetics |
| ms-ms | Tandem mass spectrometry (MS/MS) |
| msi | Microsatellite instability testing (MSI) |
| mutation-scanning-of-select-exons | Mutation scanning of select exons |
| mutation-scanning-of-the-entire-coding-region | Mutation scanning of the entire coding region |
| ngs-mps | Next-Generation (NGS)/Massively parallel sequencing (MPS) |
| ola | Oligonucleotide Ligation Assay (OLA) |
| oligonucleotide-hybridization-based-dna-sequencing | Oligonucleotide hybridization-based DNA sequencing |
| other | Other |
| pcr | PCR |
| pcr-rflp-with-southern-hybridization | PCR-RFLP with Southern hybridization |
| pcr-with-allele-specific-hybridization | PCR with allele specific hybridization |
| protein-analysis | Protein analysis |
| protein-expression | Protein expression |
| protein-truncation-test | Protein truncation test |
| pyrosequencing | Pyrosequencing |
| q-banding | Q-banding |
| qpcr | Quantitative PCR (qPCR) |
| r-banding | R-banding |
| rflp | RFLP |
| rna-analysis | RNA analysis |
| rt-lamp | RT-LAMP |
| rt-pcr | RT-PCR |
| rt-pcr-with-gel-analysis | RT-PCR with gel analysis |
| rt-qpcr | RT-qPCR |
| sequence-analysis-of-select-exons | Sequence analysis of select exons |
| sequence-analysis-of-the-entire-coding-region | Sequence analysis of the entire coding region |
| silver-staining | Silver staining |
| sister-chromatid-exchange | Sister chromatid exchange |
| sky | Spectral karyotyping (SKY) |
| snp-detection | SNP Detection |
| t-banding | T-banding |
| targeted-variant-analysis | Targeted variant analysis |
| tetra-nucleotide-repeat-by-pcr-or-southern-blot | Tetra-nucleotide repeat by PCR or Southern Blot |
| tiling-arrays | Tiling Arrays |
| trinucleotide-repeat-by-pcr-or-southern-blot | Trinucleotide repeat by PCR or Southern Blot |
| udp | Uniparental disomy study (UPD) |
| uni-directional-sanger-sequencing | Uni-directional Sanger sequencing |
This value set expansion contains 81 concepts.
| System | Version | Code | Display | JSON | XML |
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | alternative-splicing-detection | Alternative splicing detection | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | analyte | Analyte | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | aspe | Allele-specific primer extension (ASPE) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | bi-directional-sanger-sequence-analysis | Bi-directional Sanger Sequence Analysis | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | biochemical-genetics | Biochemical Genetics | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | c-banding | C-banding | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | chromatin-immunoprecipitation-on-chip | Chromatin Immunoprecipitation on ChIP | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | chromosome-breakage-studies | Chromosome breakage studies | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | cia | Chemiluminescent Immunoassay (CIA) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | comparative-genomic-hybridization | Comparative Genomic Hybridization | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | cytogenetics | Cytogenetics | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | damid | DamID | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | deletion-duplication-analysis | Deletion/duplication analysis | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | detection-of-homozygosity | Detection of homozygosity | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | digital-microfluidic-microspheres | Digital microfluidic microspheres | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | digital-virtual-karyotyping | Digital / Virtual karyotyping | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | elisa | Enzyme-Linked Immunosorbent Assays (ELISA) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | enzymatic-levels | Enzymatic levels | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | enzyme-activity | Enzyme activity | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | enzyme-assay | Enzyme assay | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | fish | Fluorescence in situ hybridization (FISH) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | fish-interphase | FISH-interphase | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | fish-metaphase | FISH-metaphase | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | flow-cytometry | Flow cytometry | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | fluorometry | Fluorometry | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | fusion-genes-microarrays | Fusion genes microarrays | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | g-banding | G-banding | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | gc-ms | Gas chromatography–mass spectrometry (GC-MS) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | gene-expression-profiling | Gene expression profiling | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | gene-id | GeneID | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | gold-nanoparticle-probe-technology | Gold nanoparticle probe technology | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | hplc | High-performance liquid chromatography (HPLC) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | immunohistochemistry | Immunohistochemistry | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | karyotyping | Karyotyping | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | lc-ms | Liquid chromatography mass spectrometry (LC-MS) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | lc-ms-ms | Liquid chromatography-tandem mass spectrometry (LC-MS/MS) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | linkage-analysis | Linkage analysis | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | m-fish | Multicolor FISH (M-FISH) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | metabolite-levels | Metabolite levels | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | methylation-analysis | Methylation analysis | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | methylation-specific-pcr | Methylation-specific PCR | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | microarray | Microarray | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | mlpa | Multiplex Ligation-dependent Probe Amplification (MLPA) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | molecular-genetics | Molecular Genetics | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | ms-ms | Tandem mass spectrometry (MS/MS) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | msi | Microsatellite instability testing (MSI) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | mutation-scanning-of-select-exons | Mutation scanning of select exons | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | mutation-scanning-of-the-entire-coding-region | Mutation scanning of the entire coding region | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | ngs-mps | Next-Generation (NGS)/Massively parallel sequencing (MPS) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | ola | Oligonucleotide Ligation Assay (OLA) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | oligonucleotide-hybridization-based-dna-sequencing | Oligonucleotide hybridization-based DNA sequencing | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | other | Other | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | pcr | PCR | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | pcr-rflp-with-southern-hybridization | PCR-RFLP with Southern hybridization | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | pcr-with-allele-specific-hybridization | PCR with allele specific hybridization | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | protein-analysis | Protein analysis | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | protein-expression | Protein expression | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | protein-truncation-test | Protein truncation test | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | pyrosequencing | Pyrosequencing | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | q-banding | Q-banding | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | qpcr | Quantitative PCR (qPCR) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | r-banding | R-banding | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | rflp | RFLP | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | rna-analysis | RNA analysis | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | rt-lamp | RT-LAMP | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | rt-pcr | RT-PCR | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | rt-pcr-with-gel-analysis | RT-PCR with gel analysis | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | rt-qpcr | RT-qPCR | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | sequence-analysis-of-select-exons | Sequence analysis of select exons | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | sequence-analysis-of-the-entire-coding-region | Sequence analysis of the entire coding region | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | silver-staining | Silver staining | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | sister-chromatid-exchange | Sister chromatid exchange | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | sky | Spectral karyotyping (SKY) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | snp-detection | SNP Detection | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | t-banding | T-banding | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | targeted-variant-analysis | Targeted variant analysis | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | tetra-nucleotide-repeat-by-pcr-or-southern-blot | Tetra-nucleotide repeat by PCR or Southern Blot | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | tiling-arrays | Tiling Arrays | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | trinucleotide-repeat-by-pcr-or-southern-blot | Trinucleotide repeat by PCR or Southern Blot | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | udp | Uniparental disomy study (UPD) | ||
http://hl7.org/fhir/genomicstudy-methodtype | 5.0.0 | uni-directional-sanger-sequencing | Uni-directional Sanger sequencing |
Explanation of the columns that may appear on this page:
| Level | A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies |
| System | The source of the definition of the code (when the value set draws in codes defined elsewhere) |
| Code | The code (used as the code in the resource instance) |
| Display | The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application |
| Definition | An explanation of the meaning of the concept |
| Comments | Additional notes about how to use the code |