Extensions for Using Data Elements from FHIR R5 in FHIR STU3
0.1.0 - STU International flag

Extensions for Using Data Elements from FHIR R5 in FHIR STU3 - Downloaded Version null See the Directory of published versions

ValueSet: R5GenomicstudyMethodtypeForR3

Official URL: http://hl7.org/fhir/uv/xver/ValueSet/R5-genomicstudy-methodtype-for-R3 Version: 0.1.0
Standards status: Trial-use Maturity Level: 1 Responsible: Clinical Genomics Computable Name: R5GenomicstudyMethodtypeForR3

This cross-version ValueSet represents content from http://hl7.org/fhir/ValueSet/genomicstudy-methodtype|5.0.0 for use in FHIR STU3.

This value set is part of the cross-version definitions generated to enable use of the value set http://hl7.org/fhir/ValueSet/genomicstudy-methodtype|5.0.0 as defined in FHIR R5 in FHIR STU3.

The source value set is bound to the following FHIR R5 elements:

  • GenomicStudy.analysis.methodType

Note that all concepts are included in this cross-version definition because no concepts have compatible representations

Following are the generation technical comments:

FHIR ValueSet http://hl7.org/fhir/ValueSet/genomicstudy-methodtype|5.0.0, defined in FHIR R5 does not have any mapping to FHIR STU3

References

Logical Definition (CLD)

 

Expansion

This value set expansion contains 81 concepts.

SystemVersionCodeDisplayJSONXML
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  alternative-splicing-detectionAlternative splicing detection
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  analyteAnalyte
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  aspeAllele-specific primer extension (ASPE)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  bi-directional-sanger-sequence-analysisBi-directional Sanger Sequence Analysis
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  biochemical-geneticsBiochemical Genetics
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  c-bandingC-banding
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  chromatin-immunoprecipitation-on-chipChromatin Immunoprecipitation on ChIP
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  chromosome-breakage-studiesChromosome breakage studies
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  ciaChemiluminescent Immunoassay (CIA)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  comparative-genomic-hybridizationComparative Genomic Hybridization
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  cytogeneticsCytogenetics
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  damidDamID
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  deletion-duplication-analysisDeletion/duplication analysis
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  detection-of-homozygosityDetection of homozygosity
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  digital-microfluidic-microspheresDigital microfluidic microspheres
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  digital-virtual-karyotypingDigital / Virtual karyotyping
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  elisaEnzyme-Linked Immunosorbent Assays (ELISA)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  enzymatic-levelsEnzymatic levels
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  enzyme-activityEnzyme activity
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  enzyme-assayEnzyme assay
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  fishFluorescence in situ hybridization (FISH)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  fish-interphaseFISH-interphase
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  fish-metaphaseFISH-metaphase
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  flow-cytometryFlow cytometry
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  fluorometryFluorometry
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  fusion-genes-microarraysFusion genes microarrays
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  g-bandingG-banding
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  gc-msGas chromatography–mass spectrometry (GC-MS)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  gene-expression-profilingGene expression profiling
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  gene-idGeneID
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  gold-nanoparticle-probe-technologyGold nanoparticle probe technology
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  hplcHigh-performance liquid chromatography (HPLC)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  immunohistochemistryImmunohistochemistry
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  karyotypingKaryotyping
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  lc-msLiquid chromatography mass spectrometry (LC-MS)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  lc-ms-msLiquid chromatography-tandem mass spectrometry (LC-MS/MS)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  linkage-analysisLinkage analysis
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  m-fishMulticolor FISH (M-FISH)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  metabolite-levelsMetabolite levels
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  methylation-analysisMethylation analysis
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  methylation-specific-pcrMethylation-specific PCR
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  microarrayMicroarray
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  mlpaMultiplex Ligation-dependent Probe Amplification (MLPA)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  molecular-geneticsMolecular Genetics
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  ms-msTandem mass spectrometry (MS/MS)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  msiMicrosatellite instability testing (MSI)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  mutation-scanning-of-select-exonsMutation scanning of select exons
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  mutation-scanning-of-the-entire-coding-regionMutation scanning of the entire coding region
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  ngs-mpsNext-Generation (NGS)/Massively parallel sequencing (MPS)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  olaOligonucleotide Ligation Assay (OLA)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  oligonucleotide-hybridization-based-dna-sequencingOligonucleotide hybridization-based DNA sequencing
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  otherOther
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  pcrPCR
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  pcr-rflp-with-southern-hybridizationPCR-RFLP with Southern hybridization
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  pcr-with-allele-specific-hybridizationPCR with allele specific hybridization
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  protein-analysisProtein analysis
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  protein-expressionProtein expression
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  protein-truncation-testProtein truncation test
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  pyrosequencingPyrosequencing
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  q-bandingQ-banding
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  qpcrQuantitative PCR (qPCR)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  r-bandingR-banding
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  rflpRFLP
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  rna-analysisRNA analysis
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  rt-lampRT-LAMP
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  rt-pcrRT-PCR
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  rt-pcr-with-gel-analysisRT-PCR with gel analysis
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  rt-qpcrRT-qPCR
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  sequence-analysis-of-select-exonsSequence analysis of select exons
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  sequence-analysis-of-the-entire-coding-regionSequence analysis of the entire coding region
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  silver-stainingSilver staining
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  sister-chromatid-exchangeSister chromatid exchange
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  skySpectral karyotyping (SKY)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  snp-detectionSNP Detection
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  t-bandingT-banding
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  targeted-variant-analysisTargeted variant analysis
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  tetra-nucleotide-repeat-by-pcr-or-southern-blotTetra-nucleotide repeat by PCR or Southern Blot
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  tiling-arraysTiling Arrays
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  trinucleotide-repeat-by-pcr-or-southern-blotTrinucleotide repeat by PCR or Southern Blot
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  udpUniparental disomy study (UPD)
http://hl7.org/fhir/genomicstudy-methodtype5.0.0  uni-directional-sanger-sequencingUni-directional Sanger sequencing

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code