FHIR Cross-Version Extensions package for FHIR R5 from FHIR R4B
0.0.1-snapshot-2 - informative International flag

FHIR Cross-Version Extensions package for FHIR R5 from FHIR R4B - Version 0.0.1-snapshot-2. See the Directory of published versions

Extension: Ext_R4B_MolecularSequence_repository - Detailed Descriptions

Page standards status: Informative Maturity Level: 0

Definitions for the ext-R4B-MolecularSequence.repository extension.

Guidance on how to interpret the contents of this table can be foundhere

0. Extension
Definition

Configurations of the external repository. The repository shall store target's observedSeq or records related with target's observedSeq.

ShortExternal repository which contains detailed report related with observedSeq in this resource
Comments

MolecularSequence.repository has no related element in R5:MolecularSequence

Control0..*
2. Extension.extension
Control1..*
SlicingThis element introduces a set of slices on Extension.extension. The slices areUnordered and Closed, and can be differentiated using the following discriminators:
  • value @ url
  • 4. Extension.extension:type
    Slice Nametype
    Definition

    Click and see / RESTful API / Need login to see / RESTful API with authentication / Other ways to see resource.

    Shortdirectlink | openapi | login | oauth | other
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Control1..1
    6. Extension.extension:type.url
    Control1..1
    Fixed Valuetype
    8. Extension.extension:type.value[x]
    Definition

    Click and see / RESTful API / Need login to see / RESTful API with authentication / Other ways to see resource.

    Shortdirectlink | openapi | login | oauth | other
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    BindingThe codes SHALL be taken from R4B_repository_type_for_R5 (0.0.1-snapshot-2)
    (required to http://hl7.org/fhir/4.3/ValueSet/R4B-repository-type-for-R5|0.0.1-snapshot-2)

    Type for repository

    Typecode
    [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
    10. Extension.extension:url
    Slice Nameurl
    Definition

    URI of an external repository which contains further details about the genetics data.

    ShortURI of the repository
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Control0..1
    12. Extension.extension:url.url
    Control1..1
    Fixed Valueurl
    14. Extension.extension:url.value[x]
    Definition

    URI of an external repository which contains further details about the genetics data.

    ShortURI of the repository
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Typeuri
    [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
    16. Extension.extension:name
    Slice Namename
    Definition

    URI of an external repository which contains further details about the genetics data.

    ShortRepository's name
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Control0..1
    18. Extension.extension:name.url
    Control1..1
    Fixed Valuename
    20. Extension.extension:name.value[x]
    Definition

    URI of an external repository which contains further details about the genetics data.

    ShortRepository's name
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Typestring
    [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
    22. Extension.extension:datasetId
    Slice NamedatasetId
    Definition

    Id of the variant in this external repository. The server will understand how to use this id to call for more info about datasets in external repository.

    ShortId of the dataset that used to call for dataset in repository
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Control0..1
    24. Extension.extension:datasetId.url
    Control1..1
    Fixed ValuedatasetId
    26. Extension.extension:datasetId.value[x]
    Definition

    Id of the variant in this external repository. The server will understand how to use this id to call for more info about datasets in external repository.

    ShortId of the dataset that used to call for dataset in repository
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Typestring
    [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
    28. Extension.extension:variantsetId
    Slice NamevariantsetId
    Definition

    Id of the variantset in this external repository. The server will understand how to use this id to call for more info about variantsets in external repository.

    ShortId of the variantset that used to call for variantset in repository
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Control0..1
    30. Extension.extension:variantsetId.url
    Control1..1
    Fixed ValuevariantsetId
    32. Extension.extension:variantsetId.value[x]
    Definition

    Id of the variantset in this external repository. The server will understand how to use this id to call for more info about variantsets in external repository.

    ShortId of the variantset that used to call for variantset in repository
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Typestring
    [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
    34. Extension.extension:readsetId
    Slice NamereadsetId
    Definition

    Id of the read in this external repository.

    ShortId of the read
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Control0..1
    36. Extension.extension:readsetId.url
    Control1..1
    Fixed ValuereadsetId
    38. Extension.extension:readsetId.value[x]
    Definition

    Id of the read in this external repository.

    ShortId of the read
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Typestring
    [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
    40. Extension.url
    Control1..1
    Fixed Valuehttp://hl7.org/fhir/4.3/StructureDefinition/extension-MolecularSequence.repository

    Guidance on how to interpret the contents of this table can be foundhere

    0. Extension
    Definition

    Configurations of the external repository. The repository shall store target's observedSeq or records related with target's observedSeq.


    Optional Extension Element - found in all resources.

    ShortExternal repository which contains detailed report related with observedSeq in this resourceOptional Extensions Element
    Comments

    MolecularSequence.repository has no related element in R5:MolecularSequence

    Control0..*
    Is Modifierfalse
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    2. Extension.extension
    Definition

    An Extension


    May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

    ShortExtensionAdditional content defined by implementations
    Comments

    There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

    Control10..*
    TypeExtension
    Is Modifierfalse
    Summaryfalse
    Alternate Namesextensions, user content
    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
    ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
    SlicingThis element introduces a set of slices on Extension.extension. The slices areUnordered and ClosedOpen, and can be differentiated using the following discriminators:
    • value @ url
    • 4. Extension.extension:type
      Slice Nametype
      Definition

      Click and see / RESTful API / Need login to see / RESTful API with authentication / Other ways to see resource.

      Shortdirectlink | openapi | login | oauth | otherAdditional content defined by implementations
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control10..1*
      TypeExtension
      Is Modifierfalse
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      6. Extension.extension:type.url
      Definition

      Source of the definition for the extension code - a logical name or a URL.

      Shortidentifies the meaning of the extension
      Comments

      The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

      Control1..1
      Typeuri
      Is Modifierfalse
      XML FormatIn the XML format, this property is represented as an attribute.
      Summaryfalse
      Fixed Valuetype
      8. Extension.extension:type.value[x]
      Definition

      Click and see / RESTful API / Need login to see / RESTful API with authentication / Other ways to see resource.


      Value of extension - must be one of a constrained set of the data types (see Extensibility for a list).

      Shortdirectlink | openapi | login | oauth | otherValue of extension
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1
      This element is affected by the following invariants: ext-1
      BindingThe codes SHALL be taken from For codes, see R4B_repository_type_for_R5 (0.0.1-snapshot-2)
      (required to http://hl7.org/fhir/4.3/ValueSet/R4B-repository-type-for-R5|0.0.1-snapshot-2)

      Type for repository

      Typecode, date, Meta, Address, Attachment, integer, Count, DataRequirement, Dosage, uuid, Identifier, RatioRange, Coding, SampledData, id, positiveInt, Distance, Availability, integer64, Period, Duration, canonical, Range, RelatedArtifact, base64Binary, UsageContext, Timing, decimal, ExtendedContactDetail, CodeableConcept, ParameterDefinition, dateTime, string, oid, instant, ContactPoint, HumanName, Money, markdown, Ratio, Age, Reference, TriggerDefinition, Quantity, uri, url, Annotation, ContactDetail, boolean, Expression, CodeableReference, Signature, unsignedInt, time
      [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
      Is Modifierfalse
      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      10. Extension.extension:url
      Slice Nameurl
      Definition

      URI of an external repository which contains further details about the genetics data.

      ShortURI of the repositoryAdditional content defined by implementations
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1*
      TypeExtension
      Is Modifierfalse
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      12. Extension.extension:url.url
      Definition

      Source of the definition for the extension code - a logical name or a URL.

      Shortidentifies the meaning of the extension
      Comments

      The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

      Control1..1
      Typeuri
      Is Modifierfalse
      XML FormatIn the XML format, this property is represented as an attribute.
      Summaryfalse
      Fixed Valueurl
      14. Extension.extension:url.value[x]
      Definition

      URI of an external repository which contains further details about the genetics data.


      Value of extension - must be one of a constrained set of the data types (see Extensibility for a list).

      ShortURI of the repositoryValue of extension
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1
      This element is affected by the following invariants: ext-1
      Typeuri, date, Meta, Address, Attachment, integer, Count, DataRequirement, Dosage, uuid, Identifier, RatioRange, Coding, SampledData, id, positiveInt, Distance, Availability, integer64, Period, Duration, canonical, Range, RelatedArtifact, base64Binary, UsageContext, Timing, decimal, ExtendedContactDetail, CodeableConcept, ParameterDefinition, dateTime, code, string, oid, instant, ContactPoint, HumanName, Money, markdown, Ratio, Age, Reference, TriggerDefinition, Quantity, url, Annotation, ContactDetail, boolean, Expression, CodeableReference, Signature, unsignedInt, time
      [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
      Is Modifierfalse
      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      16. Extension.extension:name
      Slice Namename
      Definition

      URI of an external repository which contains further details about the genetics data.

      ShortRepository's nameAdditional content defined by implementations
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1*
      TypeExtension
      Is Modifierfalse
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      18. Extension.extension:name.url
      Definition

      Source of the definition for the extension code - a logical name or a URL.

      Shortidentifies the meaning of the extension
      Comments

      The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

      Control1..1
      Typeuri
      Is Modifierfalse
      XML FormatIn the XML format, this property is represented as an attribute.
      Summaryfalse
      Fixed Valuename
      20. Extension.extension:name.value[x]
      Definition

      URI of an external repository which contains further details about the genetics data.


      Value of extension - must be one of a constrained set of the data types (see Extensibility for a list).

      ShortRepository's nameValue of extension
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1
      This element is affected by the following invariants: ext-1
      Typestring, date, Meta, Address, Attachment, integer, Count, DataRequirement, Dosage, uuid, Identifier, RatioRange, Coding, SampledData, id, positiveInt, Distance, Availability, integer64, Period, Duration, canonical, Range, RelatedArtifact, base64Binary, UsageContext, Timing, decimal, ExtendedContactDetail, CodeableConcept, ParameterDefinition, dateTime, code, oid, instant, ContactPoint, HumanName, Money, markdown, Ratio, Age, Reference, TriggerDefinition, Quantity, uri, url, Annotation, ContactDetail, boolean, Expression, CodeableReference, Signature, unsignedInt, time
      [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
      Is Modifierfalse
      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      22. Extension.extension:datasetId
      Slice NamedatasetId
      Definition

      Id of the variant in this external repository. The server will understand how to use this id to call for more info about datasets in external repository.

      ShortId of the dataset that used to call for dataset in repositoryAdditional content defined by implementations
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1*
      TypeExtension
      Is Modifierfalse
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      24. Extension.extension:datasetId.url
      Definition

      Source of the definition for the extension code - a logical name or a URL.

      Shortidentifies the meaning of the extension
      Comments

      The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

      Control1..1
      Typeuri
      Is Modifierfalse
      XML FormatIn the XML format, this property is represented as an attribute.
      Summaryfalse
      Fixed ValuedatasetId
      26. Extension.extension:datasetId.value[x]
      Definition

      Id of the variant in this external repository. The server will understand how to use this id to call for more info about datasets in external repository.


      Value of extension - must be one of a constrained set of the data types (see Extensibility for a list).

      ShortId of the dataset that used to call for dataset in repositoryValue of extension
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1
      This element is affected by the following invariants: ext-1
      Typestring, date, Meta, Address, Attachment, integer, Count, DataRequirement, Dosage, uuid, Identifier, RatioRange, Coding, SampledData, id, positiveInt, Distance, Availability, integer64, Period, Duration, canonical, Range, RelatedArtifact, base64Binary, UsageContext, Timing, decimal, ExtendedContactDetail, CodeableConcept, ParameterDefinition, dateTime, code, oid, instant, ContactPoint, HumanName, Money, markdown, Ratio, Age, Reference, TriggerDefinition, Quantity, uri, url, Annotation, ContactDetail, boolean, Expression, CodeableReference, Signature, unsignedInt, time
      [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
      Is Modifierfalse
      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      28. Extension.extension:variantsetId
      Slice NamevariantsetId
      Definition

      Id of the variantset in this external repository. The server will understand how to use this id to call for more info about variantsets in external repository.

      ShortId of the variantset that used to call for variantset in repositoryAdditional content defined by implementations
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1*
      TypeExtension
      Is Modifierfalse
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      30. Extension.extension:variantsetId.url
      Definition

      Source of the definition for the extension code - a logical name or a URL.

      Shortidentifies the meaning of the extension
      Comments

      The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

      Control1..1
      Typeuri
      Is Modifierfalse
      XML FormatIn the XML format, this property is represented as an attribute.
      Summaryfalse
      Fixed ValuevariantsetId
      32. Extension.extension:variantsetId.value[x]
      Definition

      Id of the variantset in this external repository. The server will understand how to use this id to call for more info about variantsets in external repository.


      Value of extension - must be one of a constrained set of the data types (see Extensibility for a list).

      ShortId of the variantset that used to call for variantset in repositoryValue of extension
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1
      This element is affected by the following invariants: ext-1
      Typestring, date, Meta, Address, Attachment, integer, Count, DataRequirement, Dosage, uuid, Identifier, RatioRange, Coding, SampledData, id, positiveInt, Distance, Availability, integer64, Period, Duration, canonical, Range, RelatedArtifact, base64Binary, UsageContext, Timing, decimal, ExtendedContactDetail, CodeableConcept, ParameterDefinition, dateTime, code, oid, instant, ContactPoint, HumanName, Money, markdown, Ratio, Age, Reference, TriggerDefinition, Quantity, uri, url, Annotation, ContactDetail, boolean, Expression, CodeableReference, Signature, unsignedInt, time
      [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
      Is Modifierfalse
      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      34. Extension.extension:readsetId
      Slice NamereadsetId
      Definition

      Id of the read in this external repository.

      ShortId of the readAdditional content defined by implementations
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1*
      TypeExtension
      Is Modifierfalse
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      36. Extension.extension:readsetId.url
      Definition

      Source of the definition for the extension code - a logical name or a URL.

      Shortidentifies the meaning of the extension
      Comments

      The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

      Control1..1
      Typeuri
      Is Modifierfalse
      XML FormatIn the XML format, this property is represented as an attribute.
      Summaryfalse
      Fixed ValuereadsetId
      38. Extension.extension:readsetId.value[x]
      Definition

      Id of the read in this external repository.


      Value of extension - must be one of a constrained set of the data types (see Extensibility for a list).

      ShortId of the readValue of extension
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..1
      This element is affected by the following invariants: ext-1
      Typestring, date, Meta, Address, Attachment, integer, Count, DataRequirement, Dosage, uuid, Identifier, RatioRange, Coding, SampledData, id, positiveInt, Distance, Availability, integer64, Period, Duration, canonical, Range, RelatedArtifact, base64Binary, UsageContext, Timing, decimal, ExtendedContactDetail, CodeableConcept, ParameterDefinition, dateTime, code, oid, instant, ContactPoint, HumanName, Money, markdown, Ratio, Age, Reference, TriggerDefinition, Quantity, uri, url, Annotation, ContactDetail, boolean, Expression, CodeableReference, Signature, unsignedInt, time
      [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
      Is Modifierfalse
      Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      40. Extension.url
      Definition

      Source of the definition for the extension code - a logical name or a URL.

      Shortidentifies the meaning of the extension
      Comments

      The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

      Control1..1
      Typeuri
      Is Modifierfalse
      XML FormatIn the XML format, this property is represented as an attribute.
      Summaryfalse
      Fixed Valuehttp://hl7.org/fhir/4.3/StructureDefinition/extension-MolecularSequence.repository

      Guidance on how to interpret the contents of this table can be foundhere

      0. Extension
      Definition

      Configurations of the external repository. The repository shall store target's observedSeq or records related with target's observedSeq.

      ShortExternal repository which contains detailed report related with observedSeq in this resource
      Comments

      MolecularSequence.repository has no related element in R5:MolecularSequence

      Control0..*
      Is Modifierfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      2. Extension.id
      Definition

      Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

      ShortUnique id for inter-element referencing
      Control0..1
      This element is affected by the following invariants: ele-1
      Typeid
      Is Modifierfalse
      XML FormatIn the XML format, this property is represented as an attribute.
      Summaryfalse
      4. Extension.extension
      Definition

      An Extension

      ShortExtension
      Control1..*
      TypeExtension
      Is Modifierfalse
      Summaryfalse
      Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
      ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
      SlicingThis element introduces a set of slices on Extension.extension. The slices areUnordered and Closed, and can be differentiated using the following discriminators:
      • value @ url
      • 6. Extension.extension:type
        Slice Nametype
        Definition

        Click and see / RESTful API / Need login to see / RESTful API with authentication / Other ways to see resource.

        Shortdirectlink | openapi | login | oauth | other
        Comments

        MolecularSequence.repository has no related element in R5:MolecularSequence

        Control1..1
        TypeExtension
        Is Modifierfalse
        Summaryfalse
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
        8. Extension.extension:type.id
        Definition

        Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

        ShortUnique id for inter-element referencing
        Control0..1
        This element is affected by the following invariants: ele-1
        Typeid
        Is Modifierfalse
        XML FormatIn the XML format, this property is represented as an attribute.
        Summaryfalse
        10. Extension.extension:type.extension
        Definition

        May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

        ShortAdditional content defined by implementations
        Comments

        There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

        Control0..*
        TypeExtension
        Is Modifierfalse
        Summaryfalse
        Alternate Namesextensions, user content
        Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
        ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
        SlicingThis element introduces a set of slices on Extension.extension.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
        • value @ url
        • 12. Extension.extension:type.url
          Definition

          Source of the definition for the extension code - a logical name or a URL.

          Shortidentifies the meaning of the extension
          Comments

          The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

          Control1..1
          Typeuri
          Is Modifierfalse
          XML FormatIn the XML format, this property is represented as an attribute.
          Summaryfalse
          Fixed Valuetype
          14. Extension.extension:type.value[x]
          Definition

          Click and see / RESTful API / Need login to see / RESTful API with authentication / Other ways to see resource.

          Shortdirectlink | openapi | login | oauth | other
          Comments

          MolecularSequence.repository has no related element in R5:MolecularSequence

          Control0..1
          This element is affected by the following invariants: ext-1
          BindingThe codes SHALL be taken from R4B_repository_type_for_R5 (0.0.1-snapshot-2)
          (required to http://hl7.org/fhir/4.3/ValueSet/R4B-repository-type-for-R5|0.0.1-snapshot-2)

          Type for repository

          Typecode
          [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
          Is Modifierfalse
          Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
          Summaryfalse
          Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
          16. Extension.extension:url
          Slice Nameurl
          Definition

          URI of an external repository which contains further details about the genetics data.

          ShortURI of the repository
          Comments

          MolecularSequence.repository has no related element in R5:MolecularSequence

          Control0..1
          TypeExtension
          Is Modifierfalse
          Summaryfalse
          Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
          ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
          18. Extension.extension:url.id
          Definition

          Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

          ShortUnique id for inter-element referencing
          Control0..1
          This element is affected by the following invariants: ele-1
          Typeid
          Is Modifierfalse
          XML FormatIn the XML format, this property is represented as an attribute.
          Summaryfalse
          20. Extension.extension:url.extension
          Definition

          May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

          ShortAdditional content defined by implementations
          Comments

          There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

          Control0..*
          TypeExtension
          Is Modifierfalse
          Summaryfalse
          Alternate Namesextensions, user content
          Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
          ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
          SlicingThis element introduces a set of slices on Extension.extension.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
          • value @ url
          • 22. Extension.extension:url.url
            Definition

            Source of the definition for the extension code - a logical name or a URL.

            Shortidentifies the meaning of the extension
            Comments

            The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

            Control1..1
            Typeuri
            Is Modifierfalse
            XML FormatIn the XML format, this property is represented as an attribute.
            Summaryfalse
            Fixed Valueurl
            24. Extension.extension:url.value[x]
            Definition

            URI of an external repository which contains further details about the genetics data.

            ShortURI of the repository
            Comments

            MolecularSequence.repository has no related element in R5:MolecularSequence

            Control0..1
            This element is affected by the following invariants: ext-1
            Typeuri
            [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
            Is Modifierfalse
            Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
            Summaryfalse
            Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
            26. Extension.extension:name
            Slice Namename
            Definition

            URI of an external repository which contains further details about the genetics data.

            ShortRepository's name
            Comments

            MolecularSequence.repository has no related element in R5:MolecularSequence

            Control0..1
            TypeExtension
            Is Modifierfalse
            Summaryfalse
            Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
            ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
            28. Extension.extension:name.id
            Definition

            Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

            ShortUnique id for inter-element referencing
            Control0..1
            This element is affected by the following invariants: ele-1
            Typeid
            Is Modifierfalse
            XML FormatIn the XML format, this property is represented as an attribute.
            Summaryfalse
            30. Extension.extension:name.extension
            Definition

            May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

            ShortAdditional content defined by implementations
            Comments

            There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

            Control0..*
            TypeExtension
            Is Modifierfalse
            Summaryfalse
            Alternate Namesextensions, user content
            Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
            ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
            SlicingThis element introduces a set of slices on Extension.extension.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
            • value @ url
            • 32. Extension.extension:name.url
              Definition

              Source of the definition for the extension code - a logical name or a URL.

              Shortidentifies the meaning of the extension
              Comments

              The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

              Control1..1
              Typeuri
              Is Modifierfalse
              XML FormatIn the XML format, this property is represented as an attribute.
              Summaryfalse
              Fixed Valuename
              34. Extension.extension:name.value[x]
              Definition

              URI of an external repository which contains further details about the genetics data.

              ShortRepository's name
              Comments

              MolecularSequence.repository has no related element in R5:MolecularSequence

              Control0..1
              This element is affected by the following invariants: ext-1
              Typestring
              [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
              Is Modifierfalse
              Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
              Summaryfalse
              Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
              36. Extension.extension:datasetId
              Slice NamedatasetId
              Definition

              Id of the variant in this external repository. The server will understand how to use this id to call for more info about datasets in external repository.

              ShortId of the dataset that used to call for dataset in repository
              Comments

              MolecularSequence.repository has no related element in R5:MolecularSequence

              Control0..1
              TypeExtension
              Is Modifierfalse
              Summaryfalse
              Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
              ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
              38. Extension.extension:datasetId.id
              Definition

              Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

              ShortUnique id for inter-element referencing
              Control0..1
              This element is affected by the following invariants: ele-1
              Typeid
              Is Modifierfalse
              XML FormatIn the XML format, this property is represented as an attribute.
              Summaryfalse
              40. Extension.extension:datasetId.extension
              Definition

              May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

              ShortAdditional content defined by implementations
              Comments

              There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

              Control0..*
              TypeExtension
              Is Modifierfalse
              Summaryfalse
              Alternate Namesextensions, user content
              Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
              ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
              SlicingThis element introduces a set of slices on Extension.extension.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
              • value @ url
              • 42. Extension.extension:datasetId.url
                Definition

                Source of the definition for the extension code - a logical name or a URL.

                Shortidentifies the meaning of the extension
                Comments

                The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

                Control1..1
                Typeuri
                Is Modifierfalse
                XML FormatIn the XML format, this property is represented as an attribute.
                Summaryfalse
                Fixed ValuedatasetId
                44. Extension.extension:datasetId.value[x]
                Definition

                Id of the variant in this external repository. The server will understand how to use this id to call for more info about datasets in external repository.

                ShortId of the dataset that used to call for dataset in repository
                Comments

                MolecularSequence.repository has no related element in R5:MolecularSequence

                Control0..1
                This element is affected by the following invariants: ext-1
                Typestring
                [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
                Is Modifierfalse
                Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                Summaryfalse
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                46. Extension.extension:variantsetId
                Slice NamevariantsetId
                Definition

                Id of the variantset in this external repository. The server will understand how to use this id to call for more info about variantsets in external repository.

                ShortId of the variantset that used to call for variantset in repository
                Comments

                MolecularSequence.repository has no related element in R5:MolecularSequence

                Control0..1
                TypeExtension
                Is Modifierfalse
                Summaryfalse
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                48. Extension.extension:variantsetId.id
                Definition

                Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

                ShortUnique id for inter-element referencing
                Control0..1
                This element is affected by the following invariants: ele-1
                Typeid
                Is Modifierfalse
                XML FormatIn the XML format, this property is represented as an attribute.
                Summaryfalse
                50. Extension.extension:variantsetId.extension
                Definition

                May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

                ShortAdditional content defined by implementations
                Comments

                There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

                Control0..*
                TypeExtension
                Is Modifierfalse
                Summaryfalse
                Alternate Namesextensions, user content
                Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                SlicingThis element introduces a set of slices on Extension.extension.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
                • value @ url
                • 52. Extension.extension:variantsetId.url
                  Definition

                  Source of the definition for the extension code - a logical name or a URL.

                  Shortidentifies the meaning of the extension
                  Comments

                  The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

                  Control1..1
                  Typeuri
                  Is Modifierfalse
                  XML FormatIn the XML format, this property is represented as an attribute.
                  Summaryfalse
                  Fixed ValuevariantsetId
                  54. Extension.extension:variantsetId.value[x]
                  Definition

                  Id of the variantset in this external repository. The server will understand how to use this id to call for more info about variantsets in external repository.

                  ShortId of the variantset that used to call for variantset in repository
                  Comments

                  MolecularSequence.repository has no related element in R5:MolecularSequence

                  Control0..1
                  This element is affected by the following invariants: ext-1
                  Typestring
                  [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
                  Is Modifierfalse
                  Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                  Summaryfalse
                  Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                  56. Extension.extension:readsetId
                  Slice NamereadsetId
                  Definition

                  Id of the read in this external repository.

                  ShortId of the read
                  Comments

                  MolecularSequence.repository has no related element in R5:MolecularSequence

                  Control0..1
                  TypeExtension
                  Is Modifierfalse
                  Summaryfalse
                  Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                  ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                  58. Extension.extension:readsetId.id
                  Definition

                  Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces.

                  ShortUnique id for inter-element referencing
                  Control0..1
                  This element is affected by the following invariants: ele-1
                  Typeid
                  Is Modifierfalse
                  XML FormatIn the XML format, this property is represented as an attribute.
                  Summaryfalse
                  60. Extension.extension:readsetId.extension
                  Definition

                  May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and managable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.

                  ShortAdditional content defined by implementations
                  Comments

                  There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone.

                  Control0..*
                  TypeExtension
                  Is Modifierfalse
                  Summaryfalse
                  Alternate Namesextensions, user content
                  Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                  ext-1: Must have either extensions or value[x], not both (extension.exists() != value.exists())
                  SlicingThis element introduces a set of slices on Extension.extension.extension. The slices areUnordered and Open, and can be differentiated using the following discriminators:
                  • value @ url
                  • 62. Extension.extension:readsetId.url
                    Definition

                    Source of the definition for the extension code - a logical name or a URL.

                    Shortidentifies the meaning of the extension
                    Comments

                    The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

                    Control1..1
                    Typeuri
                    Is Modifierfalse
                    XML FormatIn the XML format, this property is represented as an attribute.
                    Summaryfalse
                    Fixed ValuereadsetId
                    64. Extension.extension:readsetId.value[x]
                    Definition

                    Id of the read in this external repository.

                    ShortId of the read
                    Comments

                    MolecularSequence.repository has no related element in R5:MolecularSequence

                    Control0..1
                    This element is affected by the following invariants: ext-1
                    Typestring
                    [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
                    Is Modifierfalse
                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                    Summaryfalse
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))
                    66. Extension.url
                    Definition

                    Source of the definition for the extension code - a logical name or a URL.

                    Shortidentifies the meaning of the extension
                    Comments

                    The definition may point directly to a computable or human-readable definition of the extensibility codes, or it may be a logical URI as declared in some other specification. The definition SHALL be a URI for the Structure Definition defining the extension.

                    Control1..1
                    Typeuri
                    Is Modifierfalse
                    XML FormatIn the XML format, this property is represented as an attribute.
                    Summaryfalse
                    Fixed Valuehttp://hl7.org/fhir/4.3/StructureDefinition/extension-MolecularSequence.repository
                    68. Extension.value[x]
                    Definition

                    Value of extension - must be one of a constrained set of the data types (see Extensibility for a list).

                    ShortValue of extension
                    Control0..1
                    This element is affected by the following invariants: ext-1
                    TypeChoice of: base64Binary, boolean, canonical, code, date, dateTime, decimal, id, instant, integer, integer64, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, CodeableReference, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, RatioRange, Reference, SampledData, Signature, Timing, ContactDetail, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Availability, ExtendedContactDetail, Dosage, Meta
                    [x] NoteSeeChoice of Data Typesfor further information about how to use [x]
                    Is Modifierfalse
                    Primitive ValueThis primitive element may be present, or absent, or replaced by an extension
                    Summaryfalse
                    Invariantsele-1: All FHIR elements must have a @value or children (hasValue() or (children().count() > id.count()))