FHIR Cross-Version Extensions package for FHIR R4B from FHIR R4
0.0.1-snapshot-2 - informative International flag

FHIR Cross-Version Extensions package for FHIR R4B from FHIR R4 - Version 0.0.1-snapshot-2. See the Directory of published versions

Extension: Cross-version Extension for R4.SubstanceSourceMaterial for use in FHIR R4B

Official URL: http://hl7.org/fhir/4.0/StructureDefinition/extension-SubstanceSourceMaterial Version: 0.0.1-snapshot-2
Standards status: Informative Maturity Level: 0 Computable Name: Ext_R4_SubstanceSourceMaterial
This cross-version extension represents SubstanceSourceMaterial from http://hl7.org/fhir/StructureDefinition/SubstanceSourceMaterial 4.0.1 for use in FHIR R4B.

Context of Use

This extension may be used on the following element(s):

  • Element ID Basic

Usage info

Usages:

You can also check for usages in the FHIR IG Statistics

Formal Views of Extension Content

Description of Profiles, Differentials, Snapshots, and how the XML and JSON presentations work.

This structure is derived from Extension

Summary

Simple Extension with the type base64Binary, boolean, canonical, code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, CodeableReference, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, RatioRange, Reference, SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage: This cross-version extension represents SubstanceSourceMaterial from http://hl7.org/fhir/StructureDefinition/SubstanceSourceMaterial|4.0.1 for use in FHIR R4B.

Maturity: 0

This structure is derived from Extension

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Extension 0..* Extension(4.3.0) Source material shall capture information on the taxonomic and anatomical origins as well as the fraction of a material that can result in or can be modified to form a substance. This set of data elements shall be used to define polymer substances isolated from biological matrices. Taxonomic and anatomical origins shall be described using a controlled vocabulary as required. This information is captured for naturally derived polymers ( . starch) and structurally diverse substances. For Organisms belonging to the Kingdom Plantae the Substance level defines the fresh material of a single species or infraspecies, the Herbal Drug and the Herbal preparation. For Herbal preparations, the fraction information will be captured at the Substance information level and additional information for herbal extracts will be captured at the Specified Substance Group 1 information level. See for further explanation the Substance Class: Structurally Diverse and the herbal annex
... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
.... extension:sourceMaterialClass 0..1 Extension General high level classification of the source material specific to the origin of the material
..... url 1..1 uri "sourceMaterialClass"
..... value[x] 0..1 CodeableConcept General high level classification of the source material specific to the origin of the material
.... extension:sourceMaterialType 0..1 Extension The type of the source material shall be specified based on a controlled vocabulary. For vaccines, this subclause refers to the class of infectious agent
..... url 1..1 uri "sourceMaterialType"
..... value[x] 0..1 CodeableConcept The type of the source material shall be specified based on a controlled vocabulary. For vaccines, this subclause refers to the class of infectious agent
.... extension:sourceMaterialState 0..1 Extension The state of the source material when extracted
..... url 1..1 uri "sourceMaterialState"
..... value[x] 0..1 CodeableConcept The state of the source material when extracted
.... extension:organismId 0..1 Extension The unique identifier associated with the source material parent organism shall be specified
..... url 1..1 uri "organismId"
..... value[x] 0..1 Identifier The unique identifier associated with the source material parent organism shall be specified
.... extension:organismName 0..1 Extension The organism accepted Scientific name shall be provided based on the organism taxonomy
..... url 1..1 uri "organismName"
..... value[x] 0..1 string The organism accepted Scientific name shall be provided based on the organism taxonomy
.... extension:parentSubstanceId 0..* Extension The parent of the herbal drug Ginkgo biloba, Leaf is the substance ID of the substance (fresh) of Ginkgo biloba L. or Ginkgo biloba L. (Whole plant)
..... url 1..1 uri "parentSubstanceId"
..... value[x] 0..1 Identifier The parent of the herbal drug Ginkgo biloba, Leaf is the substance ID of the substance (fresh) of Ginkgo biloba L. or Ginkgo biloba L. (Whole plant)
.... extension:parentSubstanceName 0..* Extension The parent substance of the Herbal Drug, or Herbal preparation
..... url 1..1 uri "parentSubstanceName"
..... value[x] 0..1 string The parent substance of the Herbal Drug, or Herbal preparation
.... extension:countryOfOrigin 0..* Extension The country where the plant material is harvested or the countries where the plasma is sourced from as laid down in accordance with the Plasma Master File. For “Plasma-derived substances” the attribute country of origin provides information about the countries used for the manufacturing of the Cryopoor plama or Crioprecipitate
..... url 1..1 uri "countryOfOrigin"
..... value[x] 0..1 CodeableConcept The country where the plant material is harvested or the countries where the plasma is sourced from as laid down in accordance with the Plasma Master File. For “Plasma-derived substances” the attribute country of origin provides information about the countries used for the manufacturing of the Cryopoor plama or Crioprecipitate
.... extension:geographicalLocation 0..* Extension The place/region where the plant is harvested or the places/regions where the animal source material has its habitat
..... url 1..1 uri "geographicalLocation"
..... value[x] 0..1 string The place/region where the plant is harvested or the places/regions where the animal source material has its habitat
.... extension:developmentStage 0..1 Extension Stage of life for animals, plants, insects and microorganisms. This information shall be provided only when the substance is significantly different in these stages (e.g. foetal bovine serum)
..... url 1..1 uri "developmentStage"
..... value[x] 0..1 CodeableConcept Stage of life for animals, plants, insects and microorganisms. This information shall be provided only when the substance is significantly different in these stages (e.g. foetal bovine serum)
.... extension:fractionDescription 0..* Extension Many complex materials are fractions of parts of plants, animals, or minerals. Fraction elements are often necessary to define both Substances and Specified Group 1 Substances. For substances derived from Plants, fraction information will be captured at the Substance information level ( . Oils, Juices and Exudates). Additional information for Extracts, such as extraction solvent composition, will be captured at the Specified Substance Group 1 information level. For plasma-derived products fraction information will be captured at the Substance and the Specified Substance Group 1 levels
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
...... extension:fraction 0..1 Extension This element is capturing information about the fraction of a plant part, or human plasma for fractionation
....... url 1..1 uri "fraction"
....... value[x] 0..1 string This element is capturing information about the fraction of a plant part, or human plasma for fractionation
...... extension:materialType 0..1 Extension The specific type of the material constituting the component. For Herbal preparations the particulars of the extracts (liquid/dry) is described in Specified Substance Group 1
....... url 1..1 uri "materialType"
....... value[x] 0..1 CodeableConcept The specific type of the material constituting the component. For Herbal preparations the particulars of the extracts (liquid/dry) is described in Specified Substance Group 1
..... url 1..1 uri "fractionDescription"
.... extension:organism 0..1 Extension This subclause describes the organism which the substance is derived from. For vaccines, the parent organism shall be specified based on these subclause elements. As an example, full taxonomy will be described for the Substance Name: ., Leaf
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
...... extension:family 0..1 Extension The family of an organism shall be specified
....... url 1..1 uri "family"
....... value[x] 0..1 CodeableConcept The family of an organism shall be specified
...... extension:genus 0..1 Extension The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies
....... url 1..1 uri "genus"
....... value[x] 0..1 CodeableConcept The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies
...... extension:species 0..1 Extension The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies
....... url 1..1 uri "species"
....... value[x] 0..1 CodeableConcept The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies
...... extension:intraspecificType 0..1 Extension The Intraspecific type of an organism shall be specified
....... url 1..1 uri "intraspecificType"
....... value[x] 0..1 CodeableConcept The Intraspecific type of an organism shall be specified
...... extension:intraspecificDescription 0..1 Extension The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention
....... url 1..1 uri "intraspecificDescription"
....... value[x] 0..1 string The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention
...... extension:author 0..* Extension 4.9.13.6.1 Author type (Conditional)
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
........ extension:authorType 0..1 Extension The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name
......... url 1..1 uri "authorType"
......... value[x] 0..1 CodeableConcept The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name
........ extension:authorDescription 0..1 Extension The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank)
......... url 1..1 uri "authorDescription"
......... value[x] 0..1 string The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank)
....... url 1..1 uri "author"
...... extension:hybrid 0..1 Extension 4.9.13.8.1 Hybrid species maternal organism ID (Optional)
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
........ extension:maternalOrganismId 0..1 Extension The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
......... url 1..1 uri "maternalOrganismId"
......... value[x] 0..1 string The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
........ extension:maternalOrganismName 0..1 Extension The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
......... url 1..1 uri "maternalOrganismName"
......... value[x] 0..1 string The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
........ extension:paternalOrganismId 0..1 Extension The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary
......... url 1..1 uri "paternalOrganismId"
......... value[x] 0..1 string The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary
........ extension:paternalOrganismName 0..1 Extension The name of the paternal species constituting the hybrid organism shall be specified
......... url 1..1 uri "paternalOrganismName"
......... value[x] 0..1 string The name of the paternal species constituting the hybrid organism shall be specified
........ extension:hybridType 0..1 Extension The hybrid type of an organism shall be specified
......... url 1..1 uri "hybridType"
......... value[x] 0..1 CodeableConcept The hybrid type of an organism shall be specified
....... url 1..1 uri "hybrid"
...... extension:organismGeneral 0..1 Extension 4.9.13.7.1 Kingdom (Conditional)
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
........ extension:kingdom 0..1 Extension The kingdom of an organism shall be specified
......... url 1..1 uri "kingdom"
......... value[x] 0..1 CodeableConcept The kingdom of an organism shall be specified
........ extension:phylum 0..1 Extension The phylum of an organism shall be specified
......... url 1..1 uri "phylum"
......... value[x] 0..1 CodeableConcept The phylum of an organism shall be specified
........ extension:class 0..1 Extension The class of an organism shall be specified
......... url 1..1 uri "class"
......... value[x] 0..1 CodeableConcept The class of an organism shall be specified
........ extension:order 0..1 Extension The order of an organism shall be specified,
......... url 1..1 uri "order"
......... value[x] 0..1 CodeableConcept The order of an organism shall be specified,
....... url 1..1 uri "organismGeneral"
..... url 1..1 uri "organism"
.... extension:partDescription 0..* Extension To do
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
...... extension:part 0..1 Extension Entity of anatomical origin of source material within an organism
....... url 1..1 uri "part"
....... value[x] 0..1 CodeableConcept Entity of anatomical origin of source material within an organism
...... extension:partLocation 0..1 Extension The detailed anatomic location when the part can be extracted from different anatomical locations of the organism. Multiple alternative locations may apply
....... url 1..1 uri "partLocation"
....... value[x] 0..1 CodeableConcept The detailed anatomic location when the part can be extracted from different anatomical locations of the organism. Multiple alternative locations may apply
..... url 1..1 uri "partDescription"
... url 1..1 uri "http://hl7.org/fhir/4.0/StructureDefinition/extension-SubstanceSourceMaterial"

doco Documentation for this format
NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Extension 0..* Extension(4.3.0) Source material shall capture information on the taxonomic and anatomical origins as well as the fraction of a material that can result in or can be modified to form a substance. This set of data elements shall be used to define polymer substances isolated from biological matrices. Taxonomic and anatomical origins shall be described using a controlled vocabulary as required. This information is captured for naturally derived polymers ( . starch) and structurally diverse substances. For Organisms belonging to the Kingdom Plantae the Substance level defines the fresh material of a single species or infraspecies, the Herbal Drug and the Herbal preparation. For Herbal preparations, the fraction information will be captured at the Substance information level and additional information for herbal extracts will be captured at the Specified Substance Group 1 information level. See for further explanation the Substance Class: Structurally Diverse and the herbal annex
Constraints: ext-1
... id 0..1 id Unique id for inter-element referencing
... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
.... extension:sourceMaterialClass 0..1 Extension General high level classification of the source material specific to the origin of the material
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "sourceMaterialClass"
..... value[x] 0..1 CodeableConcept General high level classification of the source material specific to the origin of the material
.... extension:sourceMaterialType 0..1 Extension The type of the source material shall be specified based on a controlled vocabulary. For vaccines, this subclause refers to the class of infectious agent
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "sourceMaterialType"
..... value[x] 0..1 CodeableConcept The type of the source material shall be specified based on a controlled vocabulary. For vaccines, this subclause refers to the class of infectious agent
.... extension:sourceMaterialState 0..1 Extension The state of the source material when extracted
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "sourceMaterialState"
..... value[x] 0..1 CodeableConcept The state of the source material when extracted
.... extension:organismId 0..1 Extension The unique identifier associated with the source material parent organism shall be specified
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "organismId"
..... value[x] 0..1 Identifier The unique identifier associated with the source material parent organism shall be specified
.... extension:organismName 0..1 Extension The organism accepted Scientific name shall be provided based on the organism taxonomy
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "organismName"
..... value[x] 0..1 string The organism accepted Scientific name shall be provided based on the organism taxonomy
.... extension:parentSubstanceId 0..* Extension The parent of the herbal drug Ginkgo biloba, Leaf is the substance ID of the substance (fresh) of Ginkgo biloba L. or Ginkgo biloba L. (Whole plant)
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "parentSubstanceId"
..... value[x] 0..1 Identifier The parent of the herbal drug Ginkgo biloba, Leaf is the substance ID of the substance (fresh) of Ginkgo biloba L. or Ginkgo biloba L. (Whole plant)
.... extension:parentSubstanceName 0..* Extension The parent substance of the Herbal Drug, or Herbal preparation
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "parentSubstanceName"
..... value[x] 0..1 string The parent substance of the Herbal Drug, or Herbal preparation
.... extension:countryOfOrigin 0..* Extension The country where the plant material is harvested or the countries where the plasma is sourced from as laid down in accordance with the Plasma Master File. For “Plasma-derived substances” the attribute country of origin provides information about the countries used for the manufacturing of the Cryopoor plama or Crioprecipitate
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "countryOfOrigin"
..... value[x] 0..1 CodeableConcept The country where the plant material is harvested or the countries where the plasma is sourced from as laid down in accordance with the Plasma Master File. For “Plasma-derived substances” the attribute country of origin provides information about the countries used for the manufacturing of the Cryopoor plama or Crioprecipitate
.... extension:geographicalLocation 0..* Extension The place/region where the plant is harvested or the places/regions where the animal source material has its habitat
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "geographicalLocation"
..... value[x] 0..1 string The place/region where the plant is harvested or the places/regions where the animal source material has its habitat
.... extension:developmentStage 0..1 Extension Stage of life for animals, plants, insects and microorganisms. This information shall be provided only when the substance is significantly different in these stages (e.g. foetal bovine serum)
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "developmentStage"
..... value[x] 0..1 CodeableConcept Stage of life for animals, plants, insects and microorganisms. This information shall be provided only when the substance is significantly different in these stages (e.g. foetal bovine serum)
.... extension:fractionDescription 0..* Extension Many complex materials are fractions of parts of plants, animals, or minerals. Fraction elements are often necessary to define both Substances and Specified Group 1 Substances. For substances derived from Plants, fraction information will be captured at the Substance information level ( . Oils, Juices and Exudates). Additional information for Extracts, such as extraction solvent composition, will be captured at the Specified Substance Group 1 information level. For plasma-derived products fraction information will be captured at the Substance and the Specified Substance Group 1 levels
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
...... extension:fraction 0..1 Extension This element is capturing information about the fraction of a plant part, or human plasma for fractionation
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "fraction"
....... value[x] 0..1 string This element is capturing information about the fraction of a plant part, or human plasma for fractionation
...... extension:materialType 0..1 Extension The specific type of the material constituting the component. For Herbal preparations the particulars of the extracts (liquid/dry) is described in Specified Substance Group 1
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "materialType"
....... value[x] 0..1 CodeableConcept The specific type of the material constituting the component. For Herbal preparations the particulars of the extracts (liquid/dry) is described in Specified Substance Group 1
..... url 1..1 uri "fractionDescription"
..... value[x] 0..1 Value of extension
...... valueBase64Binary base64Binary
...... valueBoolean boolean
...... valueCanonical canonical(Any)
...... valueCode code
...... valueDate date
...... valueDateTime dateTime
...... valueDecimal decimal
...... valueId id
...... valueInstant instant
...... valueInteger integer
...... valueMarkdown markdown
...... valueOid oid
...... valuePositiveInt positiveInt
...... valueString string
...... valueTime time
...... valueUnsignedInt unsignedInt
...... valueUri uri
...... valueUrl url
...... valueUuid uuid
...... valueAddress Address
...... valueAge Age
...... valueAnnotation Annotation
...... valueAttachment Attachment
...... valueCodeableConcept CodeableConcept
...... valueCodeableReference CodeableReference
...... valueCoding Coding
...... valueContactPoint ContactPoint
...... valueCount Count
...... valueDistance Distance
...... valueDuration Duration
...... valueHumanName HumanName
...... valueIdentifier Identifier
...... valueMoney Money
...... valuePeriod Period
...... valueQuantity Quantity
...... valueRange Range
...... valueRatio Ratio
...... valueRatioRange RatioRange
...... valueReference Reference(Any)
...... valueSampledData SampledData
...... valueSignature Signature
...... valueTiming Timing
...... valueContactDetail ContactDetail
...... valueContributor Contributor
...... valueDataRequirement DataRequirement
...... valueExpression Expression
...... valueParameterDefinition ParameterDefinition
...... valueRelatedArtifact RelatedArtifact
...... valueTriggerDefinition TriggerDefinition
...... valueUsageContext UsageContext
...... valueDosage Dosage
.... extension:organism 0..1 Extension This subclause describes the organism which the substance is derived from. For vaccines, the parent organism shall be specified based on these subclause elements. As an example, full taxonomy will be described for the Substance Name: ., Leaf
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
...... extension:family 0..1 Extension The family of an organism shall be specified
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "family"
....... value[x] 0..1 CodeableConcept The family of an organism shall be specified
...... extension:genus 0..1 Extension The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "genus"
....... value[x] 0..1 CodeableConcept The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies
...... extension:species 0..1 Extension The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "species"
....... value[x] 0..1 CodeableConcept The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies
...... extension:intraspecificType 0..1 Extension The Intraspecific type of an organism shall be specified
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "intraspecificType"
....... value[x] 0..1 CodeableConcept The Intraspecific type of an organism shall be specified
...... extension:intraspecificDescription 0..1 Extension The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "intraspecificDescription"
....... value[x] 0..1 string The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention
...... extension:author 0..* Extension 4.9.13.6.1 Author type (Conditional)
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
........ extension:authorType 0..1 Extension The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "authorType"
......... value[x] 0..1 CodeableConcept The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name
........ extension:authorDescription 0..1 Extension The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank)
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "authorDescription"
......... value[x] 0..1 string The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank)
....... url 1..1 uri "author"
....... value[x] 0..1 Value of extension
........ valueBase64Binary base64Binary
........ valueBoolean boolean
........ valueCanonical canonical(Any)
........ valueCode code
........ valueDate date
........ valueDateTime dateTime
........ valueDecimal decimal
........ valueId id
........ valueInstant instant
........ valueInteger integer
........ valueMarkdown markdown
........ valueOid oid
........ valuePositiveInt positiveInt
........ valueString string
........ valueTime time
........ valueUnsignedInt unsignedInt
........ valueUri uri
........ valueUrl url
........ valueUuid uuid
........ valueAddress Address
........ valueAge Age
........ valueAnnotation Annotation
........ valueAttachment Attachment
........ valueCodeableConcept CodeableConcept
........ valueCodeableReference CodeableReference
........ valueCoding Coding
........ valueContactPoint ContactPoint
........ valueCount Count
........ valueDistance Distance
........ valueDuration Duration
........ valueHumanName HumanName
........ valueIdentifier Identifier
........ valueMoney Money
........ valuePeriod Period
........ valueQuantity Quantity
........ valueRange Range
........ valueRatio Ratio
........ valueRatioRange RatioRange
........ valueReference Reference(Any)
........ valueSampledData SampledData
........ valueSignature Signature
........ valueTiming Timing
........ valueContactDetail ContactDetail
........ valueContributor Contributor
........ valueDataRequirement DataRequirement
........ valueExpression Expression
........ valueParameterDefinition ParameterDefinition
........ valueRelatedArtifact RelatedArtifact
........ valueTriggerDefinition TriggerDefinition
........ valueUsageContext UsageContext
........ valueDosage Dosage
...... extension:hybrid 0..1 Extension 4.9.13.8.1 Hybrid species maternal organism ID (Optional)
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
........ extension:maternalOrganismId 0..1 Extension The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "maternalOrganismId"
......... value[x] 0..1 string The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
........ extension:maternalOrganismName 0..1 Extension The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "maternalOrganismName"
......... value[x] 0..1 string The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
........ extension:paternalOrganismId 0..1 Extension The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "paternalOrganismId"
......... value[x] 0..1 string The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary
........ extension:paternalOrganismName 0..1 Extension The name of the paternal species constituting the hybrid organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "paternalOrganismName"
......... value[x] 0..1 string The name of the paternal species constituting the hybrid organism shall be specified
........ extension:hybridType 0..1 Extension The hybrid type of an organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "hybridType"
......... value[x] 0..1 CodeableConcept The hybrid type of an organism shall be specified
....... url 1..1 uri "hybrid"
....... value[x] 0..1 Value of extension
........ valueBase64Binary base64Binary
........ valueBoolean boolean
........ valueCanonical canonical(Any)
........ valueCode code
........ valueDate date
........ valueDateTime dateTime
........ valueDecimal decimal
........ valueId id
........ valueInstant instant
........ valueInteger integer
........ valueMarkdown markdown
........ valueOid oid
........ valuePositiveInt positiveInt
........ valueString string
........ valueTime time
........ valueUnsignedInt unsignedInt
........ valueUri uri
........ valueUrl url
........ valueUuid uuid
........ valueAddress Address
........ valueAge Age
........ valueAnnotation Annotation
........ valueAttachment Attachment
........ valueCodeableConcept CodeableConcept
........ valueCodeableReference CodeableReference
........ valueCoding Coding
........ valueContactPoint ContactPoint
........ valueCount Count
........ valueDistance Distance
........ valueDuration Duration
........ valueHumanName HumanName
........ valueIdentifier Identifier
........ valueMoney Money
........ valuePeriod Period
........ valueQuantity Quantity
........ valueRange Range
........ valueRatio Ratio
........ valueRatioRange RatioRange
........ valueReference Reference(Any)
........ valueSampledData SampledData
........ valueSignature Signature
........ valueTiming Timing
........ valueContactDetail ContactDetail
........ valueContributor Contributor
........ valueDataRequirement DataRequirement
........ valueExpression Expression
........ valueParameterDefinition ParameterDefinition
........ valueRelatedArtifact RelatedArtifact
........ valueTriggerDefinition TriggerDefinition
........ valueUsageContext UsageContext
........ valueDosage Dosage
...... extension:organismGeneral 0..1 Extension 4.9.13.7.1 Kingdom (Conditional)
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
........ extension:kingdom 0..1 Extension The kingdom of an organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "kingdom"
......... value[x] 0..1 CodeableConcept The kingdom of an organism shall be specified
........ extension:phylum 0..1 Extension The phylum of an organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "phylum"
......... value[x] 0..1 CodeableConcept The phylum of an organism shall be specified
........ extension:class 0..1 Extension The class of an organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "class"
......... value[x] 0..1 CodeableConcept The class of an organism shall be specified
........ extension:order 0..1 Extension The order of an organism shall be specified,
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "order"
......... value[x] 0..1 CodeableConcept The order of an organism shall be specified,
....... url 1..1 uri "organismGeneral"
....... value[x] 0..1 Value of extension
........ valueBase64Binary base64Binary
........ valueBoolean boolean
........ valueCanonical canonical(Any)
........ valueCode code
........ valueDate date
........ valueDateTime dateTime
........ valueDecimal decimal
........ valueId id
........ valueInstant instant
........ valueInteger integer
........ valueMarkdown markdown
........ valueOid oid
........ valuePositiveInt positiveInt
........ valueString string
........ valueTime time
........ valueUnsignedInt unsignedInt
........ valueUri uri
........ valueUrl url
........ valueUuid uuid
........ valueAddress Address
........ valueAge Age
........ valueAnnotation Annotation
........ valueAttachment Attachment
........ valueCodeableConcept CodeableConcept
........ valueCodeableReference CodeableReference
........ valueCoding Coding
........ valueContactPoint ContactPoint
........ valueCount Count
........ valueDistance Distance
........ valueDuration Duration
........ valueHumanName HumanName
........ valueIdentifier Identifier
........ valueMoney Money
........ valuePeriod Period
........ valueQuantity Quantity
........ valueRange Range
........ valueRatio Ratio
........ valueRatioRange RatioRange
........ valueReference Reference(Any)
........ valueSampledData SampledData
........ valueSignature Signature
........ valueTiming Timing
........ valueContactDetail ContactDetail
........ valueContributor Contributor
........ valueDataRequirement DataRequirement
........ valueExpression Expression
........ valueParameterDefinition ParameterDefinition
........ valueRelatedArtifact RelatedArtifact
........ valueTriggerDefinition TriggerDefinition
........ valueUsageContext UsageContext
........ valueDosage Dosage
..... url 1..1 uri "organism"
..... value[x] 0..1 Value of extension
...... valueBase64Binary base64Binary
...... valueBoolean boolean
...... valueCanonical canonical(Any)
...... valueCode code
...... valueDate date
...... valueDateTime dateTime
...... valueDecimal decimal
...... valueId id
...... valueInstant instant
...... valueInteger integer
...... valueMarkdown markdown
...... valueOid oid
...... valuePositiveInt positiveInt
...... valueString string
...... valueTime time
...... valueUnsignedInt unsignedInt
...... valueUri uri
...... valueUrl url
...... valueUuid uuid
...... valueAddress Address
...... valueAge Age
...... valueAnnotation Annotation
...... valueAttachment Attachment
...... valueCodeableConcept CodeableConcept
...... valueCodeableReference CodeableReference
...... valueCoding Coding
...... valueContactPoint ContactPoint
...... valueCount Count
...... valueDistance Distance
...... valueDuration Duration
...... valueHumanName HumanName
...... valueIdentifier Identifier
...... valueMoney Money
...... valuePeriod Period
...... valueQuantity Quantity
...... valueRange Range
...... valueRatio Ratio
...... valueRatioRange RatioRange
...... valueReference Reference(Any)
...... valueSampledData SampledData
...... valueSignature Signature
...... valueTiming Timing
...... valueContactDetail ContactDetail
...... valueContributor Contributor
...... valueDataRequirement DataRequirement
...... valueExpression Expression
...... valueParameterDefinition ParameterDefinition
...... valueRelatedArtifact RelatedArtifact
...... valueTriggerDefinition TriggerDefinition
...... valueUsageContext UsageContext
...... valueDosage Dosage
.... extension:partDescription 0..* Extension To do
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
...... extension:part 0..1 Extension Entity of anatomical origin of source material within an organism
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "part"
....... value[x] 0..1 CodeableConcept Entity of anatomical origin of source material within an organism
...... extension:partLocation 0..1 Extension The detailed anatomic location when the part can be extracted from different anatomical locations of the organism. Multiple alternative locations may apply
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "partLocation"
....... value[x] 0..1 CodeableConcept The detailed anatomic location when the part can be extracted from different anatomical locations of the organism. Multiple alternative locations may apply
..... url 1..1 uri "partDescription"
..... value[x] 0..1 Value of extension
...... valueBase64Binary base64Binary
...... valueBoolean boolean
...... valueCanonical canonical(Any)
...... valueCode code
...... valueDate date
...... valueDateTime dateTime
...... valueDecimal decimal
...... valueId id
...... valueInstant instant
...... valueInteger integer
...... valueMarkdown markdown
...... valueOid oid
...... valuePositiveInt positiveInt
...... valueString string
...... valueTime time
...... valueUnsignedInt unsignedInt
...... valueUri uri
...... valueUrl url
...... valueUuid uuid
...... valueAddress Address
...... valueAge Age
...... valueAnnotation Annotation
...... valueAttachment Attachment
...... valueCodeableConcept CodeableConcept
...... valueCodeableReference CodeableReference
...... valueCoding Coding
...... valueContactPoint ContactPoint
...... valueCount Count
...... valueDistance Distance
...... valueDuration Duration
...... valueHumanName HumanName
...... valueIdentifier Identifier
...... valueMoney Money
...... valuePeriod Period
...... valueQuantity Quantity
...... valueRange Range
...... valueRatio Ratio
...... valueRatioRange RatioRange
...... valueReference Reference(Any)
...... valueSampledData SampledData
...... valueSignature Signature
...... valueTiming Timing
...... valueContactDetail ContactDetail
...... valueContributor Contributor
...... valueDataRequirement DataRequirement
...... valueExpression Expression
...... valueParameterDefinition ParameterDefinition
...... valueRelatedArtifact RelatedArtifact
...... valueTriggerDefinition TriggerDefinition
...... valueUsageContext UsageContext
...... valueDosage Dosage
... url 1..1 uri "http://hl7.org/fhir/4.0/StructureDefinition/extension-SubstanceSourceMaterial"
.... valueBase64Binary base64Binary
.... valueBoolean boolean
.... valueCanonical canonical(Any)
.... valueCode code
.... valueDate date
.... valueDateTime dateTime
.... valueDecimal decimal
.... valueId id
.... valueInstant instant
.... valueInteger integer
.... valueMarkdown markdown
.... valueOid oid
.... valuePositiveInt positiveInt
.... valueString string
.... valueTime time
.... valueUnsignedInt unsignedInt
.... valueUri uri
.... valueUrl url
.... valueUuid uuid
.... valueAddress Address
.... valueAge Age
.... valueAnnotation Annotation
.... valueAttachment Attachment
.... valueCodeableConcept CodeableConcept
.... valueCodeableReference CodeableReference
.... valueCoding Coding
.... valueContactPoint ContactPoint
.... valueCount Count
.... valueDistance Distance
.... valueDuration Duration
.... valueHumanName HumanName
.... valueIdentifier Identifier
.... valueMoney Money
.... valuePeriod Period
.... valueQuantity Quantity
.... valueRange Range
.... valueRatio Ratio
.... valueRatioRange RatioRange
.... valueReference Reference(Any)
.... valueSampledData SampledData
.... valueSignature Signature
.... valueTiming Timing
.... valueContactDetail ContactDetail
.... valueContributor Contributor
.... valueDataRequirement DataRequirement
.... valueExpression Expression
.... valueParameterDefinition ParameterDefinition
.... valueRelatedArtifact RelatedArtifact
.... valueTriggerDefinition TriggerDefinition
.... valueUsageContext UsageContext
.... valueDosage Dosage

doco Documentation for this format

This structure is derived from Extension

Summary

Simple Extension with the type base64Binary, boolean, canonical, code, date, dateTime, decimal, id, instant, integer, markdown, oid, positiveInt, string, time, unsignedInt, uri, url, uuid, Address, Age, Annotation, Attachment, CodeableConcept, CodeableReference, Coding, ContactPoint, Count, Distance, Duration, HumanName, Identifier, Money, Period, Quantity, Range, Ratio, RatioRange, Reference, SampledData, Signature, Timing, ContactDetail, Contributor, DataRequirement, Expression, ParameterDefinition, RelatedArtifact, TriggerDefinition, UsageContext, Dosage: This cross-version extension represents SubstanceSourceMaterial from http://hl7.org/fhir/StructureDefinition/SubstanceSourceMaterial|4.0.1 for use in FHIR R4B.

Maturity: 0

Differential View

This structure is derived from Extension

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Extension 0..* Extension(4.3.0) Source material shall capture information on the taxonomic and anatomical origins as well as the fraction of a material that can result in or can be modified to form a substance. This set of data elements shall be used to define polymer substances isolated from biological matrices. Taxonomic and anatomical origins shall be described using a controlled vocabulary as required. This information is captured for naturally derived polymers ( . starch) and structurally diverse substances. For Organisms belonging to the Kingdom Plantae the Substance level defines the fresh material of a single species or infraspecies, the Herbal Drug and the Herbal preparation. For Herbal preparations, the fraction information will be captured at the Substance information level and additional information for herbal extracts will be captured at the Specified Substance Group 1 information level. See for further explanation the Substance Class: Structurally Diverse and the herbal annex
... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
.... extension:sourceMaterialClass 0..1 Extension General high level classification of the source material specific to the origin of the material
..... url 1..1 uri "sourceMaterialClass"
..... value[x] 0..1 CodeableConcept General high level classification of the source material specific to the origin of the material
.... extension:sourceMaterialType 0..1 Extension The type of the source material shall be specified based on a controlled vocabulary. For vaccines, this subclause refers to the class of infectious agent
..... url 1..1 uri "sourceMaterialType"
..... value[x] 0..1 CodeableConcept The type of the source material shall be specified based on a controlled vocabulary. For vaccines, this subclause refers to the class of infectious agent
.... extension:sourceMaterialState 0..1 Extension The state of the source material when extracted
..... url 1..1 uri "sourceMaterialState"
..... value[x] 0..1 CodeableConcept The state of the source material when extracted
.... extension:organismId 0..1 Extension The unique identifier associated with the source material parent organism shall be specified
..... url 1..1 uri "organismId"
..... value[x] 0..1 Identifier The unique identifier associated with the source material parent organism shall be specified
.... extension:organismName 0..1 Extension The organism accepted Scientific name shall be provided based on the organism taxonomy
..... url 1..1 uri "organismName"
..... value[x] 0..1 string The organism accepted Scientific name shall be provided based on the organism taxonomy
.... extension:parentSubstanceId 0..* Extension The parent of the herbal drug Ginkgo biloba, Leaf is the substance ID of the substance (fresh) of Ginkgo biloba L. or Ginkgo biloba L. (Whole plant)
..... url 1..1 uri "parentSubstanceId"
..... value[x] 0..1 Identifier The parent of the herbal drug Ginkgo biloba, Leaf is the substance ID of the substance (fresh) of Ginkgo biloba L. or Ginkgo biloba L. (Whole plant)
.... extension:parentSubstanceName 0..* Extension The parent substance of the Herbal Drug, or Herbal preparation
..... url 1..1 uri "parentSubstanceName"
..... value[x] 0..1 string The parent substance of the Herbal Drug, or Herbal preparation
.... extension:countryOfOrigin 0..* Extension The country where the plant material is harvested or the countries where the plasma is sourced from as laid down in accordance with the Plasma Master File. For “Plasma-derived substances” the attribute country of origin provides information about the countries used for the manufacturing of the Cryopoor plama or Crioprecipitate
..... url 1..1 uri "countryOfOrigin"
..... value[x] 0..1 CodeableConcept The country where the plant material is harvested or the countries where the plasma is sourced from as laid down in accordance with the Plasma Master File. For “Plasma-derived substances” the attribute country of origin provides information about the countries used for the manufacturing of the Cryopoor plama or Crioprecipitate
.... extension:geographicalLocation 0..* Extension The place/region where the plant is harvested or the places/regions where the animal source material has its habitat
..... url 1..1 uri "geographicalLocation"
..... value[x] 0..1 string The place/region where the plant is harvested or the places/regions where the animal source material has its habitat
.... extension:developmentStage 0..1 Extension Stage of life for animals, plants, insects and microorganisms. This information shall be provided only when the substance is significantly different in these stages (e.g. foetal bovine serum)
..... url 1..1 uri "developmentStage"
..... value[x] 0..1 CodeableConcept Stage of life for animals, plants, insects and microorganisms. This information shall be provided only when the substance is significantly different in these stages (e.g. foetal bovine serum)
.... extension:fractionDescription 0..* Extension Many complex materials are fractions of parts of plants, animals, or minerals. Fraction elements are often necessary to define both Substances and Specified Group 1 Substances. For substances derived from Plants, fraction information will be captured at the Substance information level ( . Oils, Juices and Exudates). Additional information for Extracts, such as extraction solvent composition, will be captured at the Specified Substance Group 1 information level. For plasma-derived products fraction information will be captured at the Substance and the Specified Substance Group 1 levels
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
...... extension:fraction 0..1 Extension This element is capturing information about the fraction of a plant part, or human plasma for fractionation
....... url 1..1 uri "fraction"
....... value[x] 0..1 string This element is capturing information about the fraction of a plant part, or human plasma for fractionation
...... extension:materialType 0..1 Extension The specific type of the material constituting the component. For Herbal preparations the particulars of the extracts (liquid/dry) is described in Specified Substance Group 1
....... url 1..1 uri "materialType"
....... value[x] 0..1 CodeableConcept The specific type of the material constituting the component. For Herbal preparations the particulars of the extracts (liquid/dry) is described in Specified Substance Group 1
..... url 1..1 uri "fractionDescription"
.... extension:organism 0..1 Extension This subclause describes the organism which the substance is derived from. For vaccines, the parent organism shall be specified based on these subclause elements. As an example, full taxonomy will be described for the Substance Name: ., Leaf
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
...... extension:family 0..1 Extension The family of an organism shall be specified
....... url 1..1 uri "family"
....... value[x] 0..1 CodeableConcept The family of an organism shall be specified
...... extension:genus 0..1 Extension The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies
....... url 1..1 uri "genus"
....... value[x] 0..1 CodeableConcept The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies
...... extension:species 0..1 Extension The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies
....... url 1..1 uri "species"
....... value[x] 0..1 CodeableConcept The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies
...... extension:intraspecificType 0..1 Extension The Intraspecific type of an organism shall be specified
....... url 1..1 uri "intraspecificType"
....... value[x] 0..1 CodeableConcept The Intraspecific type of an organism shall be specified
...... extension:intraspecificDescription 0..1 Extension The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention
....... url 1..1 uri "intraspecificDescription"
....... value[x] 0..1 string The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention
...... extension:author 0..* Extension 4.9.13.6.1 Author type (Conditional)
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
........ extension:authorType 0..1 Extension The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name
......... url 1..1 uri "authorType"
......... value[x] 0..1 CodeableConcept The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name
........ extension:authorDescription 0..1 Extension The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank)
......... url 1..1 uri "authorDescription"
......... value[x] 0..1 string The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank)
....... url 1..1 uri "author"
...... extension:hybrid 0..1 Extension 4.9.13.8.1 Hybrid species maternal organism ID (Optional)
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
........ extension:maternalOrganismId 0..1 Extension The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
......... url 1..1 uri "maternalOrganismId"
......... value[x] 0..1 string The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
........ extension:maternalOrganismName 0..1 Extension The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
......... url 1..1 uri "maternalOrganismName"
......... value[x] 0..1 string The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
........ extension:paternalOrganismId 0..1 Extension The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary
......... url 1..1 uri "paternalOrganismId"
......... value[x] 0..1 string The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary
........ extension:paternalOrganismName 0..1 Extension The name of the paternal species constituting the hybrid organism shall be specified
......... url 1..1 uri "paternalOrganismName"
......... value[x] 0..1 string The name of the paternal species constituting the hybrid organism shall be specified
........ extension:hybridType 0..1 Extension The hybrid type of an organism shall be specified
......... url 1..1 uri "hybridType"
......... value[x] 0..1 CodeableConcept The hybrid type of an organism shall be specified
....... url 1..1 uri "hybrid"
...... extension:organismGeneral 0..1 Extension 4.9.13.7.1 Kingdom (Conditional)
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
........ extension:kingdom 0..1 Extension The kingdom of an organism shall be specified
......... url 1..1 uri "kingdom"
......... value[x] 0..1 CodeableConcept The kingdom of an organism shall be specified
........ extension:phylum 0..1 Extension The phylum of an organism shall be specified
......... url 1..1 uri "phylum"
......... value[x] 0..1 CodeableConcept The phylum of an organism shall be specified
........ extension:class 0..1 Extension The class of an organism shall be specified
......... url 1..1 uri "class"
......... value[x] 0..1 CodeableConcept The class of an organism shall be specified
........ extension:order 0..1 Extension The order of an organism shall be specified,
......... url 1..1 uri "order"
......... value[x] 0..1 CodeableConcept The order of an organism shall be specified,
....... url 1..1 uri "organismGeneral"
..... url 1..1 uri "organism"
.... extension:partDescription 0..* Extension To do
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
...... extension:part 0..1 Extension Entity of anatomical origin of source material within an organism
....... url 1..1 uri "part"
....... value[x] 0..1 CodeableConcept Entity of anatomical origin of source material within an organism
...... extension:partLocation 0..1 Extension The detailed anatomic location when the part can be extracted from different anatomical locations of the organism. Multiple alternative locations may apply
....... url 1..1 uri "partLocation"
....... value[x] 0..1 CodeableConcept The detailed anatomic location when the part can be extracted from different anatomical locations of the organism. Multiple alternative locations may apply
..... url 1..1 uri "partDescription"
... url 1..1 uri "http://hl7.org/fhir/4.0/StructureDefinition/extension-SubstanceSourceMaterial"

doco Documentation for this format

Snapshot View

NameFlagsCard.TypeDescription & Constraints    Filter: Filtersdoco
.. Extension 0..* Extension(4.3.0) Source material shall capture information on the taxonomic and anatomical origins as well as the fraction of a material that can result in or can be modified to form a substance. This set of data elements shall be used to define polymer substances isolated from biological matrices. Taxonomic and anatomical origins shall be described using a controlled vocabulary as required. This information is captured for naturally derived polymers ( . starch) and structurally diverse substances. For Organisms belonging to the Kingdom Plantae the Substance level defines the fresh material of a single species or infraspecies, the Herbal Drug and the Herbal preparation. For Herbal preparations, the fraction information will be captured at the Substance information level and additional information for herbal extracts will be captured at the Specified Substance Group 1 information level. See for further explanation the Substance Class: Structurally Diverse and the herbal annex
Constraints: ext-1
... id 0..1 id Unique id for inter-element referencing
... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
.... extension:sourceMaterialClass 0..1 Extension General high level classification of the source material specific to the origin of the material
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "sourceMaterialClass"
..... value[x] 0..1 CodeableConcept General high level classification of the source material specific to the origin of the material
.... extension:sourceMaterialType 0..1 Extension The type of the source material shall be specified based on a controlled vocabulary. For vaccines, this subclause refers to the class of infectious agent
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "sourceMaterialType"
..... value[x] 0..1 CodeableConcept The type of the source material shall be specified based on a controlled vocabulary. For vaccines, this subclause refers to the class of infectious agent
.... extension:sourceMaterialState 0..1 Extension The state of the source material when extracted
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "sourceMaterialState"
..... value[x] 0..1 CodeableConcept The state of the source material when extracted
.... extension:organismId 0..1 Extension The unique identifier associated with the source material parent organism shall be specified
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "organismId"
..... value[x] 0..1 Identifier The unique identifier associated with the source material parent organism shall be specified
.... extension:organismName 0..1 Extension The organism accepted Scientific name shall be provided based on the organism taxonomy
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "organismName"
..... value[x] 0..1 string The organism accepted Scientific name shall be provided based on the organism taxonomy
.... extension:parentSubstanceId 0..* Extension The parent of the herbal drug Ginkgo biloba, Leaf is the substance ID of the substance (fresh) of Ginkgo biloba L. or Ginkgo biloba L. (Whole plant)
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "parentSubstanceId"
..... value[x] 0..1 Identifier The parent of the herbal drug Ginkgo biloba, Leaf is the substance ID of the substance (fresh) of Ginkgo biloba L. or Ginkgo biloba L. (Whole plant)
.... extension:parentSubstanceName 0..* Extension The parent substance of the Herbal Drug, or Herbal preparation
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "parentSubstanceName"
..... value[x] 0..1 string The parent substance of the Herbal Drug, or Herbal preparation
.... extension:countryOfOrigin 0..* Extension The country where the plant material is harvested or the countries where the plasma is sourced from as laid down in accordance with the Plasma Master File. For “Plasma-derived substances” the attribute country of origin provides information about the countries used for the manufacturing of the Cryopoor plama or Crioprecipitate
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "countryOfOrigin"
..... value[x] 0..1 CodeableConcept The country where the plant material is harvested or the countries where the plasma is sourced from as laid down in accordance with the Plasma Master File. For “Plasma-derived substances” the attribute country of origin provides information about the countries used for the manufacturing of the Cryopoor plama or Crioprecipitate
.... extension:geographicalLocation 0..* Extension The place/region where the plant is harvested or the places/regions where the animal source material has its habitat
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "geographicalLocation"
..... value[x] 0..1 string The place/region where the plant is harvested or the places/regions where the animal source material has its habitat
.... extension:developmentStage 0..1 Extension Stage of life for animals, plants, insects and microorganisms. This information shall be provided only when the substance is significantly different in these stages (e.g. foetal bovine serum)
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
..... url 1..1 uri "developmentStage"
..... value[x] 0..1 CodeableConcept Stage of life for animals, plants, insects and microorganisms. This information shall be provided only when the substance is significantly different in these stages (e.g. foetal bovine serum)
.... extension:fractionDescription 0..* Extension Many complex materials are fractions of parts of plants, animals, or minerals. Fraction elements are often necessary to define both Substances and Specified Group 1 Substances. For substances derived from Plants, fraction information will be captured at the Substance information level ( . Oils, Juices and Exudates). Additional information for Extracts, such as extraction solvent composition, will be captured at the Specified Substance Group 1 information level. For plasma-derived products fraction information will be captured at the Substance and the Specified Substance Group 1 levels
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
...... extension:fraction 0..1 Extension This element is capturing information about the fraction of a plant part, or human plasma for fractionation
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "fraction"
....... value[x] 0..1 string This element is capturing information about the fraction of a plant part, or human plasma for fractionation
...... extension:materialType 0..1 Extension The specific type of the material constituting the component. For Herbal preparations the particulars of the extracts (liquid/dry) is described in Specified Substance Group 1
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "materialType"
....... value[x] 0..1 CodeableConcept The specific type of the material constituting the component. For Herbal preparations the particulars of the extracts (liquid/dry) is described in Specified Substance Group 1
..... url 1..1 uri "fractionDescription"
..... value[x] 0..1 Value of extension
...... valueBase64Binary base64Binary
...... valueBoolean boolean
...... valueCanonical canonical(Any)
...... valueCode code
...... valueDate date
...... valueDateTime dateTime
...... valueDecimal decimal
...... valueId id
...... valueInstant instant
...... valueInteger integer
...... valueMarkdown markdown
...... valueOid oid
...... valuePositiveInt positiveInt
...... valueString string
...... valueTime time
...... valueUnsignedInt unsignedInt
...... valueUri uri
...... valueUrl url
...... valueUuid uuid
...... valueAddress Address
...... valueAge Age
...... valueAnnotation Annotation
...... valueAttachment Attachment
...... valueCodeableConcept CodeableConcept
...... valueCodeableReference CodeableReference
...... valueCoding Coding
...... valueContactPoint ContactPoint
...... valueCount Count
...... valueDistance Distance
...... valueDuration Duration
...... valueHumanName HumanName
...... valueIdentifier Identifier
...... valueMoney Money
...... valuePeriod Period
...... valueQuantity Quantity
...... valueRange Range
...... valueRatio Ratio
...... valueRatioRange RatioRange
...... valueReference Reference(Any)
...... valueSampledData SampledData
...... valueSignature Signature
...... valueTiming Timing
...... valueContactDetail ContactDetail
...... valueContributor Contributor
...... valueDataRequirement DataRequirement
...... valueExpression Expression
...... valueParameterDefinition ParameterDefinition
...... valueRelatedArtifact RelatedArtifact
...... valueTriggerDefinition TriggerDefinition
...... valueUsageContext UsageContext
...... valueDosage Dosage
.... extension:organism 0..1 Extension This subclause describes the organism which the substance is derived from. For vaccines, the parent organism shall be specified based on these subclause elements. As an example, full taxonomy will be described for the Substance Name: ., Leaf
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
...... extension:family 0..1 Extension The family of an organism shall be specified
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "family"
....... value[x] 0..1 CodeableConcept The family of an organism shall be specified
...... extension:genus 0..1 Extension The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "genus"
....... value[x] 0..1 CodeableConcept The genus of an organism shall be specified; refers to the Latin epithet of the genus element of the plant/animal scientific name; it is present in names for genera, species and infraspecies
...... extension:species 0..1 Extension The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "species"
....... value[x] 0..1 CodeableConcept The species of an organism shall be specified; refers to the Latin epithet of the species of the plant/animal; it is present in names for species and infraspecies
...... extension:intraspecificType 0..1 Extension The Intraspecific type of an organism shall be specified
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "intraspecificType"
....... value[x] 0..1 CodeableConcept The Intraspecific type of an organism shall be specified
...... extension:intraspecificDescription 0..1 Extension The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "intraspecificDescription"
....... value[x] 0..1 string The intraspecific description of an organism shall be specified based on a controlled vocabulary. For Influenza Vaccine, the intraspecific description shall contain the syntax of the antigen in line with the WHO convention
...... extension:author 0..* Extension 4.9.13.6.1 Author type (Conditional)
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
........ extension:authorType 0..1 Extension The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "authorType"
......... value[x] 0..1 CodeableConcept The type of author of an organism species shall be specified. The parenthetical author of an organism species refers to the first author who published the plant/animal name (of any rank). The primary author of an organism species refers to the first author(s), who validly published the plant/animal name
........ extension:authorDescription 0..1 Extension The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank)
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "authorDescription"
......... value[x] 0..1 string The author of an organism species shall be specified. The author year of an organism shall also be specified when applicable; refers to the year in which the first author(s) published the infraspecific plant/animal name (of any rank)
....... url 1..1 uri "author"
....... value[x] 0..1 Value of extension
........ valueBase64Binary base64Binary
........ valueBoolean boolean
........ valueCanonical canonical(Any)
........ valueCode code
........ valueDate date
........ valueDateTime dateTime
........ valueDecimal decimal
........ valueId id
........ valueInstant instant
........ valueInteger integer
........ valueMarkdown markdown
........ valueOid oid
........ valuePositiveInt positiveInt
........ valueString string
........ valueTime time
........ valueUnsignedInt unsignedInt
........ valueUri uri
........ valueUrl url
........ valueUuid uuid
........ valueAddress Address
........ valueAge Age
........ valueAnnotation Annotation
........ valueAttachment Attachment
........ valueCodeableConcept CodeableConcept
........ valueCodeableReference CodeableReference
........ valueCoding Coding
........ valueContactPoint ContactPoint
........ valueCount Count
........ valueDistance Distance
........ valueDuration Duration
........ valueHumanName HumanName
........ valueIdentifier Identifier
........ valueMoney Money
........ valuePeriod Period
........ valueQuantity Quantity
........ valueRange Range
........ valueRatio Ratio
........ valueRatioRange RatioRange
........ valueReference Reference(Any)
........ valueSampledData SampledData
........ valueSignature Signature
........ valueTiming Timing
........ valueContactDetail ContactDetail
........ valueContributor Contributor
........ valueDataRequirement DataRequirement
........ valueExpression Expression
........ valueParameterDefinition ParameterDefinition
........ valueRelatedArtifact RelatedArtifact
........ valueTriggerDefinition TriggerDefinition
........ valueUsageContext UsageContext
........ valueDosage Dosage
...... extension:hybrid 0..1 Extension 4.9.13.8.1 Hybrid species maternal organism ID (Optional)
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
........ extension:maternalOrganismId 0..1 Extension The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "maternalOrganismId"
......... value[x] 0..1 string The identifier of the maternal species constituting the hybrid organism shall be specified based on a controlled vocabulary. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
........ extension:maternalOrganismName 0..1 Extension The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "maternalOrganismName"
......... value[x] 0..1 string The name of the maternal species constituting the hybrid organism shall be specified. For plants, the parents aren’t always known, and it is unlikely that it will be known which is maternal and which is paternal
........ extension:paternalOrganismId 0..1 Extension The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "paternalOrganismId"
......... value[x] 0..1 string The identifier of the paternal species constituting the hybrid organism shall be specified based on a controlled vocabulary
........ extension:paternalOrganismName 0..1 Extension The name of the paternal species constituting the hybrid organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "paternalOrganismName"
......... value[x] 0..1 string The name of the paternal species constituting the hybrid organism shall be specified
........ extension:hybridType 0..1 Extension The hybrid type of an organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "hybridType"
......... value[x] 0..1 CodeableConcept The hybrid type of an organism shall be specified
....... url 1..1 uri "hybrid"
....... value[x] 0..1 Value of extension
........ valueBase64Binary base64Binary
........ valueBoolean boolean
........ valueCanonical canonical(Any)
........ valueCode code
........ valueDate date
........ valueDateTime dateTime
........ valueDecimal decimal
........ valueId id
........ valueInstant instant
........ valueInteger integer
........ valueMarkdown markdown
........ valueOid oid
........ valuePositiveInt positiveInt
........ valueString string
........ valueTime time
........ valueUnsignedInt unsignedInt
........ valueUri uri
........ valueUrl url
........ valueUuid uuid
........ valueAddress Address
........ valueAge Age
........ valueAnnotation Annotation
........ valueAttachment Attachment
........ valueCodeableConcept CodeableConcept
........ valueCodeableReference CodeableReference
........ valueCoding Coding
........ valueContactPoint ContactPoint
........ valueCount Count
........ valueDistance Distance
........ valueDuration Duration
........ valueHumanName HumanName
........ valueIdentifier Identifier
........ valueMoney Money
........ valuePeriod Period
........ valueQuantity Quantity
........ valueRange Range
........ valueRatio Ratio
........ valueRatioRange RatioRange
........ valueReference Reference(Any)
........ valueSampledData SampledData
........ valueSignature Signature
........ valueTiming Timing
........ valueContactDetail ContactDetail
........ valueContributor Contributor
........ valueDataRequirement DataRequirement
........ valueExpression Expression
........ valueParameterDefinition ParameterDefinition
........ valueRelatedArtifact RelatedArtifact
........ valueTriggerDefinition TriggerDefinition
........ valueUsageContext UsageContext
........ valueDosage Dosage
...... extension:organismGeneral 0..1 Extension 4.9.13.7.1 Kingdom (Conditional)
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
........ extension:kingdom 0..1 Extension The kingdom of an organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "kingdom"
......... value[x] 0..1 CodeableConcept The kingdom of an organism shall be specified
........ extension:phylum 0..1 Extension The phylum of an organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "phylum"
......... value[x] 0..1 CodeableConcept The phylum of an organism shall be specified
........ extension:class 0..1 Extension The class of an organism shall be specified
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "class"
......... value[x] 0..1 CodeableConcept The class of an organism shall be specified
........ extension:order 0..1 Extension The order of an organism shall be specified,
Constraints: ext-1
......... id 0..1 id Unique id for inter-element referencing
......... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
......... url 1..1 uri "order"
......... value[x] 0..1 CodeableConcept The order of an organism shall be specified,
....... url 1..1 uri "organismGeneral"
....... value[x] 0..1 Value of extension
........ valueBase64Binary base64Binary
........ valueBoolean boolean
........ valueCanonical canonical(Any)
........ valueCode code
........ valueDate date
........ valueDateTime dateTime
........ valueDecimal decimal
........ valueId id
........ valueInstant instant
........ valueInteger integer
........ valueMarkdown markdown
........ valueOid oid
........ valuePositiveInt positiveInt
........ valueString string
........ valueTime time
........ valueUnsignedInt unsignedInt
........ valueUri uri
........ valueUrl url
........ valueUuid uuid
........ valueAddress Address
........ valueAge Age
........ valueAnnotation Annotation
........ valueAttachment Attachment
........ valueCodeableConcept CodeableConcept
........ valueCodeableReference CodeableReference
........ valueCoding Coding
........ valueContactPoint ContactPoint
........ valueCount Count
........ valueDistance Distance
........ valueDuration Duration
........ valueHumanName HumanName
........ valueIdentifier Identifier
........ valueMoney Money
........ valuePeriod Period
........ valueQuantity Quantity
........ valueRange Range
........ valueRatio Ratio
........ valueRatioRange RatioRange
........ valueReference Reference(Any)
........ valueSampledData SampledData
........ valueSignature Signature
........ valueTiming Timing
........ valueContactDetail ContactDetail
........ valueContributor Contributor
........ valueDataRequirement DataRequirement
........ valueExpression Expression
........ valueParameterDefinition ParameterDefinition
........ valueRelatedArtifact RelatedArtifact
........ valueTriggerDefinition TriggerDefinition
........ valueUsageContext UsageContext
........ valueDosage Dosage
..... url 1..1 uri "organism"
..... value[x] 0..1 Value of extension
...... valueBase64Binary base64Binary
...... valueBoolean boolean
...... valueCanonical canonical(Any)
...... valueCode code
...... valueDate date
...... valueDateTime dateTime
...... valueDecimal decimal
...... valueId id
...... valueInstant instant
...... valueInteger integer
...... valueMarkdown markdown
...... valueOid oid
...... valuePositiveInt positiveInt
...... valueString string
...... valueTime time
...... valueUnsignedInt unsignedInt
...... valueUri uri
...... valueUrl url
...... valueUuid uuid
...... valueAddress Address
...... valueAge Age
...... valueAnnotation Annotation
...... valueAttachment Attachment
...... valueCodeableConcept CodeableConcept
...... valueCodeableReference CodeableReference
...... valueCoding Coding
...... valueContactPoint ContactPoint
...... valueCount Count
...... valueDistance Distance
...... valueDuration Duration
...... valueHumanName HumanName
...... valueIdentifier Identifier
...... valueMoney Money
...... valuePeriod Period
...... valueQuantity Quantity
...... valueRange Range
...... valueRatio Ratio
...... valueRatioRange RatioRange
...... valueReference Reference(Any)
...... valueSampledData SampledData
...... valueSignature Signature
...... valueTiming Timing
...... valueContactDetail ContactDetail
...... valueContributor Contributor
...... valueDataRequirement DataRequirement
...... valueExpression Expression
...... valueParameterDefinition ParameterDefinition
...... valueRelatedArtifact RelatedArtifact
...... valueTriggerDefinition TriggerDefinition
...... valueUsageContext UsageContext
...... valueDosage Dosage
.... extension:partDescription 0..* Extension To do
Constraints: ext-1
..... id 0..1 id Unique id for inter-element referencing
..... Slices for extension 0..* Extension Extension
Slice: Unordered, Closed by value:url
Constraints: ext-1
...... extension:part 0..1 Extension Entity of anatomical origin of source material within an organism
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "part"
....... value[x] 0..1 CodeableConcept Entity of anatomical origin of source material within an organism
...... extension:partLocation 0..1 Extension The detailed anatomic location when the part can be extracted from different anatomical locations of the organism. Multiple alternative locations may apply
Constraints: ext-1
....... id 0..1 id Unique id for inter-element referencing
....... extension 0..* Extension Additional content defined by implementations
Slice: Unordered, Open by value:url
Constraints: ext-1
....... url 1..1 uri "partLocation"
....... value[x] 0..1 CodeableConcept The detailed anatomic location when the part can be extracted from different anatomical locations of the organism. Multiple alternative locations may apply
..... url 1..1 uri "partDescription"
..... value[x] 0..1 Value of extension
...... valueBase64Binary base64Binary
...... valueBoolean boolean
...... valueCanonical canonical(Any)
...... valueCode code
...... valueDate date
...... valueDateTime dateTime
...... valueDecimal decimal
...... valueId id
...... valueInstant instant
...... valueInteger integer
...... valueMarkdown markdown
...... valueOid oid
...... valuePositiveInt positiveInt
...... valueString string
...... valueTime time
...... valueUnsignedInt unsignedInt
...... valueUri uri
...... valueUrl url
...... valueUuid uuid
...... valueAddress Address
...... valueAge Age
...... valueAnnotation Annotation
...... valueAttachment Attachment
...... valueCodeableConcept CodeableConcept
...... valueCodeableReference CodeableReference
...... valueCoding Coding
...... valueContactPoint ContactPoint
...... valueCount Count
...... valueDistance Distance
...... valueDuration Duration
...... valueHumanName HumanName
...... valueIdentifier Identifier
...... valueMoney Money
...... valuePeriod Period
...... valueQuantity Quantity
...... valueRange Range
...... valueRatio Ratio
...... valueRatioRange RatioRange
...... valueReference Reference(Any)
...... valueSampledData SampledData
...... valueSignature Signature
...... valueTiming Timing
...... valueContactDetail ContactDetail
...... valueContributor Contributor
...... valueDataRequirement DataRequirement
...... valueExpression Expression
...... valueParameterDefinition ParameterDefinition
...... valueRelatedArtifact RelatedArtifact
...... valueTriggerDefinition TriggerDefinition
...... valueUsageContext UsageContext
...... valueDosage Dosage
... url 1..1 uri "http://hl7.org/fhir/4.0/StructureDefinition/extension-SubstanceSourceMaterial"
.... valueBase64Binary base64Binary
.... valueBoolean boolean
.... valueCanonical canonical(Any)
.... valueCode code
.... valueDate date
.... valueDateTime dateTime
.... valueDecimal decimal
.... valueId id
.... valueInstant instant
.... valueInteger integer
.... valueMarkdown markdown
.... valueOid oid
.... valuePositiveInt positiveInt
.... valueString string
.... valueTime time
.... valueUnsignedInt unsignedInt
.... valueUri uri
.... valueUrl url
.... valueUuid uuid
.... valueAddress Address
.... valueAge Age
.... valueAnnotation Annotation
.... valueAttachment Attachment
.... valueCodeableConcept CodeableConcept
.... valueCodeableReference CodeableReference
.... valueCoding Coding
.... valueContactPoint ContactPoint
.... valueCount Count
.... valueDistance Distance
.... valueDuration Duration
.... valueHumanName HumanName
.... valueIdentifier Identifier
.... valueMoney Money
.... valuePeriod Period
.... valueQuantity Quantity
.... valueRange Range
.... valueRatio Ratio
.... valueRatioRange RatioRange
.... valueReference Reference(Any)
.... valueSampledData SampledData
.... valueSignature Signature
.... valueTiming Timing
.... valueContactDetail ContactDetail
.... valueContributor Contributor
.... valueDataRequirement DataRequirement
.... valueExpression Expression
.... valueParameterDefinition ParameterDefinition
.... valueRelatedArtifact RelatedArtifact
.... valueTriggerDefinition TriggerDefinition
.... valueUsageContext UsageContext
.... valueDosage Dosage

doco Documentation for this format

 

Other representations of profile: CSV, Excel, Schematron

Constraints

IdGradePath(s)DetailsRequirements
ele-1errorExtension, Extension.extension, Extension.extension:sourceMaterialClass, Extension.extension:sourceMaterialClass.extension, Extension.extension:sourceMaterialClass.value[x], Extension.extension:sourceMaterialType, Extension.extension:sourceMaterialType.extension, Extension.extension:sourceMaterialType.value[x], Extension.extension:sourceMaterialState, Extension.extension:sourceMaterialState.extension, Extension.extension:sourceMaterialState.value[x], Extension.extension:organismId, Extension.extension:organismId.extension, Extension.extension:organismId.value[x], Extension.extension:organismName, Extension.extension:organismName.extension, Extension.extension:organismName.value[x], Extension.extension:parentSubstanceId, Extension.extension:parentSubstanceId.extension, Extension.extension:parentSubstanceId.value[x], Extension.extension:parentSubstanceName, Extension.extension:parentSubstanceName.extension, Extension.extension:parentSubstanceName.value[x], Extension.extension:countryOfOrigin, Extension.extension:countryOfOrigin.extension, Extension.extension:countryOfOrigin.value[x], Extension.extension:geographicalLocation, Extension.extension:geographicalLocation.extension, Extension.extension:geographicalLocation.value[x], Extension.extension:developmentStage, Extension.extension:developmentStage.extension, Extension.extension:developmentStage.value[x], Extension.extension:fractionDescription, Extension.extension:fractionDescription.extension, Extension.extension:fractionDescription.extension:fraction, Extension.extension:fractionDescription.extension:fraction.extension, Extension.extension:fractionDescription.extension:fraction.value[x], Extension.extension:fractionDescription.extension:materialType, Extension.extension:fractionDescription.extension:materialType.extension, Extension.extension:fractionDescription.extension:materialType.value[x], Extension.extension:fractionDescription.value[x], Extension.extension:organism, Extension.extension:organism.extension, Extension.extension:organism.extension:family, Extension.extension:organism.extension:family.extension, Extension.extension:organism.extension:family.value[x], Extension.extension:organism.extension:genus, Extension.extension:organism.extension:genus.extension, Extension.extension:organism.extension:genus.value[x], Extension.extension:organism.extension:species, Extension.extension:organism.extension:species.extension, Extension.extension:organism.extension:species.value[x], Extension.extension:organism.extension:intraspecificType, Extension.extension:organism.extension:intraspecificType.extension, Extension.extension:organism.extension:intraspecificType.value[x], Extension.extension:organism.extension:intraspecificDescription, Extension.extension:organism.extension:intraspecificDescription.extension, Extension.extension:organism.extension:intraspecificDescription.value[x], Extension.extension:organism.extension:author, Extension.extension:organism.extension:author.extension, Extension.extension:organism.extension:author.extension:authorType, Extension.extension:organism.extension:author.extension:authorType.extension, Extension.extension:organism.extension:author.extension:authorType.value[x], Extension.extension:organism.extension:author.extension:authorDescription, Extension.extension:organism.extension:author.extension:authorDescription.extension, Extension.extension:organism.extension:author.extension:authorDescription.value[x], Extension.extension:organism.extension:author.value[x], Extension.extension:organism.extension:hybrid, Extension.extension:organism.extension:hybrid.extension, Extension.extension:organism.extension:hybrid.extension:maternalOrganismId, Extension.extension:organism.extension:hybrid.extension:maternalOrganismId.extension, Extension.extension:organism.extension:hybrid.extension:maternalOrganismId.value[x], Extension.extension:organism.extension:hybrid.extension:maternalOrganismName, Extension.extension:organism.extension:hybrid.extension:maternalOrganismName.extension, Extension.extension:organism.extension:hybrid.extension:maternalOrganismName.value[x], Extension.extension:organism.extension:hybrid.extension:paternalOrganismId, Extension.extension:organism.extension:hybrid.extension:paternalOrganismId.extension, Extension.extension:organism.extension:hybrid.extension:paternalOrganismId.value[x], Extension.extension:organism.extension:hybrid.extension:paternalOrganismName, Extension.extension:organism.extension:hybrid.extension:paternalOrganismName.extension, Extension.extension:organism.extension:hybrid.extension:paternalOrganismName.value[x], Extension.extension:organism.extension:hybrid.extension:hybridType, Extension.extension:organism.extension:hybrid.extension:hybridType.extension, Extension.extension:organism.extension:hybrid.extension:hybridType.value[x], Extension.extension:organism.extension:hybrid.value[x], Extension.extension:organism.extension:organismGeneral, Extension.extension:organism.extension:organismGeneral.extension, Extension.extension:organism.extension:organismGeneral.extension:kingdom, Extension.extension:organism.extension:organismGeneral.extension:kingdom.extension, Extension.extension:organism.extension:organismGeneral.extension:kingdom.value[x], Extension.extension:organism.extension:organismGeneral.extension:phylum, Extension.extension:organism.extension:organismGeneral.extension:phylum.extension, Extension.extension:organism.extension:organismGeneral.extension:phylum.value[x], Extension.extension:organism.extension:organismGeneral.extension:class, Extension.extension:organism.extension:organismGeneral.extension:class.extension, Extension.extension:organism.extension:organismGeneral.extension:class.value[x], Extension.extension:organism.extension:organismGeneral.extension:order, Extension.extension:organism.extension:organismGeneral.extension:order.extension, Extension.extension:organism.extension:organismGeneral.extension:order.value[x], Extension.extension:organism.extension:organismGeneral.value[x], Extension.extension:organism.value[x], Extension.extension:partDescription, Extension.extension:partDescription.extension, Extension.extension:partDescription.extension:part, Extension.extension:partDescription.extension:part.extension, Extension.extension:partDescription.extension:part.value[x], Extension.extension:partDescription.extension:partLocation, Extension.extension:partDescription.extension:partLocation.extension, Extension.extension:partDescription.extension:partLocation.value[x], Extension.extension:partDescription.value[x], Extension.value[x]All FHIR elements must have a @value or children unless an empty Parameters resource
: hasValue() or (children().count() > id.count()) or $this is Parameters
ext-1errorExtension, Extension.extension, Extension.extension:sourceMaterialClass, Extension.extension:sourceMaterialClass.extension, Extension.extension:sourceMaterialType, Extension.extension:sourceMaterialType.extension, Extension.extension:sourceMaterialState, Extension.extension:sourceMaterialState.extension, Extension.extension:organismId, Extension.extension:organismId.extension, Extension.extension:organismName, Extension.extension:organismName.extension, Extension.extension:parentSubstanceId, Extension.extension:parentSubstanceId.extension, Extension.extension:parentSubstanceName, Extension.extension:parentSubstanceName.extension, Extension.extension:countryOfOrigin, Extension.extension:countryOfOrigin.extension, Extension.extension:geographicalLocation, Extension.extension:geographicalLocation.extension, Extension.extension:developmentStage, Extension.extension:developmentStage.extension, Extension.extension:fractionDescription, Extension.extension:fractionDescription.extension, Extension.extension:fractionDescription.extension:fraction, Extension.extension:fractionDescription.extension:fraction.extension, Extension.extension:fractionDescription.extension:materialType, Extension.extension:fractionDescription.extension:materialType.extension, Extension.extension:organism, Extension.extension:organism.extension, Extension.extension:organism.extension:family, Extension.extension:organism.extension:family.extension, Extension.extension:organism.extension:genus, Extension.extension:organism.extension:genus.extension, Extension.extension:organism.extension:species, Extension.extension:organism.extension:species.extension, Extension.extension:organism.extension:intraspecificType, Extension.extension:organism.extension:intraspecificType.extension, Extension.extension:organism.extension:intraspecificDescription, Extension.extension:organism.extension:intraspecificDescription.extension, Extension.extension:organism.extension:author, Extension.extension:organism.extension:author.extension, Extension.extension:organism.extension:author.extension:authorType, Extension.extension:organism.extension:author.extension:authorType.extension, Extension.extension:organism.extension:author.extension:authorDescription, Extension.extension:organism.extension:author.extension:authorDescription.extension, Extension.extension:organism.extension:hybrid, Extension.extension:organism.extension:hybrid.extension, Extension.extension:organism.extension:hybrid.extension:maternalOrganismId, Extension.extension:organism.extension:hybrid.extension:maternalOrganismId.extension, Extension.extension:organism.extension:hybrid.extension:maternalOrganismName, Extension.extension:organism.extension:hybrid.extension:maternalOrganismName.extension, Extension.extension:organism.extension:hybrid.extension:paternalOrganismId, Extension.extension:organism.extension:hybrid.extension:paternalOrganismId.extension, Extension.extension:organism.extension:hybrid.extension:paternalOrganismName, Extension.extension:organism.extension:hybrid.extension:paternalOrganismName.extension, Extension.extension:organism.extension:hybrid.extension:hybridType, Extension.extension:organism.extension:hybrid.extension:hybridType.extension, Extension.extension:organism.extension:organismGeneral, Extension.extension:organism.extension:organismGeneral.extension, Extension.extension:organism.extension:organismGeneral.extension:kingdom, Extension.extension:organism.extension:organismGeneral.extension:kingdom.extension, Extension.extension:organism.extension:organismGeneral.extension:phylum, Extension.extension:organism.extension:organismGeneral.extension:phylum.extension, Extension.extension:organism.extension:organismGeneral.extension:class, Extension.extension:organism.extension:organismGeneral.extension:class.extension, Extension.extension:organism.extension:organismGeneral.extension:order, Extension.extension:organism.extension:organismGeneral.extension:order.extension, Extension.extension:partDescription, Extension.extension:partDescription.extension, Extension.extension:partDescription.extension:part, Extension.extension:partDescription.extension:part.extension, Extension.extension:partDescription.extension:partLocation, Extension.extension:partDescription.extension:partLocation.extensionMust have either extensions or value[x], not both
: extension.exists() != value.exists()