Extensions for Using Data Elements from FHIR STU3 in FHIR R4B
0.1.0 - STU
Extensions for Using Data Elements from FHIR STU3 in FHIR R4B
0.1.0 - STU
Extensions for Using Data Elements from FHIR STU3 in FHIR R4B - Downloaded Version null See the Directory of published versions
The FHIR STU3 resource is represented in FHIR R4B via the MolecularSequence resource.
Note that there is a profile defined to simplify use of this cross-version resource representation:Profile: Sequence-for-MolecularSequence
A computable version of the following element information is available in: R3SequenceElementMapToR4B
| Source Element (FHIR STU3) | Target(s) | Comments |
|---|---|---|
Sequence |
||
Sequence.meta |
MolecularSequence.meta Extension: ExtensionSequence_Meta |
Element Sequence.meta is mapped to FHIR R4B element MolecularSequence.meta as SourceIsBroaderThanTarget.The mappings for Sequence.meta do not cover the following types: Meta.The mappings for Sequence.meta do not cover the following types based on type expansion: lastUpdated, profile, security, tag, versionId. |
Sequence.implicitRules |
MolecularSequence.implicitRules | Element Sequence.implicitRules is mapped to FHIR R4B element MolecularSequence.implicitRules as Equivalent. |
Sequence.language |
MolecularSequence.language | Element Sequence.language is mapped to FHIR R4B element MolecularSequence.language as Equivalent. |
Sequence.text |
MolecularSequence.text Extension: ExtensionSequence_Text |
Element Sequence.text is mapped to FHIR R4B element MolecularSequence.text as SourceIsBroaderThanTarget.The mappings for Sequence.text do not cover the following types: Narrative.The mappings for Sequence.text do not cover the following types based on type expansion: div, status. |
Sequence.contained |
MolecularSequence.contained | Element Sequence.contained is mapped to FHIR R4B element MolecularSequence.contained as SourceIsBroaderThanTarget. |
Sequence.identifier |
MolecularSequence.identifier Extension: ExtensionSequence_Identifier |
Element Sequence.identifier is mapped to FHIR R4B element MolecularSequence.identifier as SourceIsBroaderThanTarget.The mappings for Sequence.identifier do not cover the following types: Identifier.The mappings for Sequence.identifier do not cover the following types based on type expansion: assigner, period, system, type, use, value. |
Sequence.type |
MolecularSequence.type | Element Sequence.type is mapped to FHIR R4B element MolecularSequence.type as Equivalent. |
Sequence.coordinateSystem |
MolecularSequence.coordinateSystem | Element Sequence.coordinateSystem is mapped to FHIR R4B element MolecularSequence.coordinateSystem as Equivalent. |
Sequence.patient |
MolecularSequence.patient Standard Extension: alternate-reference |
Element Sequence.patient is mapped to FHIR R4B element MolecularSequence.patient as SourceIsBroaderThanTarget.The mappings for Sequence.patient do not cover the following types based on type expansion: display, identifier, reference.The standard extension alternate-reference has been mapped as the representation of FHIR STU3 element Sequence.patient with unmapped reference targets: Patient. |
Sequence.specimen |
MolecularSequence.specimen Standard Extension: alternate-reference |
Element Sequence.specimen is mapped to FHIR R4B element MolecularSequence.specimen as SourceIsBroaderThanTarget.The mappings for Sequence.specimen do not cover the following types based on type expansion: display, identifier, reference.The standard extension alternate-reference has been mapped as the representation of FHIR STU3 element Sequence.specimen with unmapped reference targets: Specimen. |
Sequence.device |
MolecularSequence.device Standard Extension: alternate-reference |
Element Sequence.device is mapped to FHIR R4B element MolecularSequence.device as SourceIsBroaderThanTarget.The mappings for Sequence.device do not cover the following types based on type expansion: display, identifier, reference.The standard extension alternate-reference has been mapped as the representation of FHIR STU3 element Sequence.device with unmapped reference targets: Device. |
Sequence.performer |
MolecularSequence.performer Standard Extension: alternate-reference |
Element Sequence.performer is mapped to FHIR R4B element MolecularSequence.performer as SourceIsBroaderThanTarget.The mappings for Sequence.performer do not cover the following types based on type expansion: display, identifier, reference.The standard extension alternate-reference has been mapped as the representation of FHIR STU3 element Sequence.performer with unmapped reference targets: Organization. |
Sequence.quantity |
MolecularSequence.quantity | Element Sequence.quantity is mapped to FHIR R4B element MolecularSequence.quantity as Equivalent. |
Sequence.referenceSeq |
MolecularSequence.referenceSeq | Element Sequence.referenceSeq is mapped to FHIR R4B element MolecularSequence.referenceSeq as Equivalent. |
Sequence.referenceSeq.chromosome |
MolecularSequence.referenceSeq.chromosome | Element Sequence.referenceSeq.chromosome is mapped to FHIR R4B element MolecularSequence.referenceSeq.chromosome as Equivalent. |
Sequence.referenceSeq.genomeBuild |
MolecularSequence.referenceSeq.genomeBuild | Element Sequence.referenceSeq.genomeBuild is mapped to FHIR R4B element MolecularSequence.referenceSeq.genomeBuild as Equivalent. |
Sequence.referenceSeq.referenceSeqId |
MolecularSequence.referenceSeq.referenceSeqId | Element Sequence.referenceSeq.referenceSeqId is mapped to FHIR R4B element MolecularSequence.referenceSeq.referenceSeqId as Equivalent. |
Sequence.referenceSeq.referenceSeqPointer |
MolecularSequence.referenceSeq.referenceSeqPointer Standard Extension: alternate-reference |
Element Sequence.referenceSeq.referenceSeqPointer is mapped to FHIR R4B element MolecularSequence.referenceSeq.referenceSeqPointer as SourceIsBroaderThanTarget.The mappings for Sequence.referenceSeq.referenceSeqPointer do not cover the following types based on type expansion: display, identifier, reference.The standard extension alternate-reference has been mapped as the representation of FHIR STU3 element Sequence.referenceSeq.referenceSeqPointer with unmapped reference targets: Sequence. |
Sequence.referenceSeq.referenceSeqString |
MolecularSequence.referenceSeq.referenceSeqString | Element Sequence.referenceSeq.referenceSeqString is mapped to FHIR R4B element MolecularSequence.referenceSeq.referenceSeqString as Equivalent. |
Sequence.referenceSeq.strand |
MolecularSequence.referenceSeq.strand Extension: ExtensionSequence_ReferenceSeq_Strand |
Element Sequence.referenceSeq.strand is mapped to FHIR R4B element MolecularSequence.referenceSeq.strand as SourceIsBroaderThanTarget.The mappings for Sequence.referenceSeq.strand do not cover the following types: integer.The mappings for Sequence.referenceSeq.strand do not cover the following types based on type expansion: value. |
Sequence.referenceSeq.windowStart |
MolecularSequence.referenceSeq.windowStart | Element Sequence.referenceSeq.windowStart is mapped to FHIR R4B element MolecularSequence.referenceSeq.windowStart as Equivalent. |
Sequence.referenceSeq.windowEnd |
MolecularSequence.referenceSeq.windowEnd | Element Sequence.referenceSeq.windowEnd is mapped to FHIR R4B element MolecularSequence.referenceSeq.windowEnd as Equivalent. |
Sequence.variant |
MolecularSequence.variant | Element Sequence.variant is mapped to FHIR R4B element MolecularSequence.variant as Equivalent. |
Sequence.variant.start |
MolecularSequence.variant.start | Element Sequence.variant.start is mapped to FHIR R4B element MolecularSequence.variant.start as Equivalent. |
Sequence.variant.end |
MolecularSequence.variant.end | Element Sequence.variant.end is mapped to FHIR R4B element MolecularSequence.variant.end as Equivalent. |
Sequence.variant.observedAllele |
MolecularSequence.variant.observedAllele | Element Sequence.variant.observedAllele is mapped to FHIR R4B element MolecularSequence.variant.observedAllele as Equivalent. |
Sequence.variant.referenceAllele |
MolecularSequence.variant.referenceAllele | Element Sequence.variant.referenceAllele is mapped to FHIR R4B element MolecularSequence.variant.referenceAllele as Equivalent. |
Sequence.variant.cigar |
MolecularSequence.variant.cigar | Element Sequence.variant.cigar is mapped to FHIR R4B element MolecularSequence.variant.cigar as Equivalent. |
Sequence.variant.variantPointer |
MolecularSequence.variant.variantPointer Standard Extension: alternate-reference |
Element Sequence.variant.variantPointer is mapped to FHIR R4B element MolecularSequence.variant.variantPointer as SourceIsBroaderThanTarget.The mappings for Sequence.variant.variantPointer do not cover the following types based on type expansion: display, identifier, reference.The standard extension alternate-reference has been mapped as the representation of FHIR STU3 element Sequence.variant.variantPointer with unmapped reference targets: Observation. |
Sequence.observedSeq |
MolecularSequence.observedSeq | Element Sequence.observedSeq is mapped to FHIR R4B element MolecularSequence.observedSeq as Equivalent. |
Sequence.quality |
MolecularSequence.quality | Element Sequence.quality is mapped to FHIR R4B element MolecularSequence.quality as Equivalent. |
Sequence.quality.type |
MolecularSequence.quality.type | Element Sequence.quality.type is mapped to FHIR R4B element MolecularSequence.quality.type as Equivalent. |
Sequence.quality.standardSequence |
MolecularSequence.quality.standardSequence | Element Sequence.quality.standardSequence is mapped to FHIR R4B element MolecularSequence.quality.standardSequence as Equivalent. |
Sequence.quality.start |
MolecularSequence.quality.start | Element Sequence.quality.start is mapped to FHIR R4B element MolecularSequence.quality.start as Equivalent. |
Sequence.quality.end |
MolecularSequence.quality.end | Element Sequence.quality.end is mapped to FHIR R4B element MolecularSequence.quality.end as Equivalent. |
Sequence.quality.score |
MolecularSequence.quality.score | Element Sequence.quality.score is mapped to FHIR R4B element MolecularSequence.quality.score as Equivalent. |
Sequence.quality.method |
MolecularSequence.quality.method | Element Sequence.quality.method is mapped to FHIR R4B element MolecularSequence.quality.method as Equivalent. |
Sequence.quality.truthTP |
MolecularSequence.quality.truthTP | Element Sequence.quality.truthTP is mapped to FHIR R4B element MolecularSequence.quality.truthTP as Equivalent. |
Sequence.quality.queryTP |
MolecularSequence.quality.queryTP | Element Sequence.quality.queryTP is mapped to FHIR R4B element MolecularSequence.quality.queryTP as Equivalent. |
Sequence.quality.truthFN |
MolecularSequence.quality.truthFN | Element Sequence.quality.truthFN is mapped to FHIR R4B element MolecularSequence.quality.truthFN as Equivalent. |
Sequence.quality.queryFP |
MolecularSequence.quality.queryFP | Element Sequence.quality.queryFP is mapped to FHIR R4B element MolecularSequence.quality.queryFP as Equivalent. |
Sequence.quality.gtFP |
MolecularSequence.quality.gtFP | Element Sequence.quality.gtFP is mapped to FHIR R4B element MolecularSequence.quality.gtFP as Equivalent. |
Sequence.quality.precision |
MolecularSequence.quality.precision | Element Sequence.quality.precision is mapped to FHIR R4B element MolecularSequence.quality.precision as Equivalent. |
Sequence.quality.recall |
MolecularSequence.quality.recall | Element Sequence.quality.recall is mapped to FHIR R4B element MolecularSequence.quality.recall as Equivalent. |
Sequence.quality.fScore |
MolecularSequence.quality.fScore | Element Sequence.quality.fScore is mapped to FHIR R4B element MolecularSequence.quality.fScore as Equivalent. |
Sequence.readCoverage |
MolecularSequence.readCoverage | Element Sequence.readCoverage is mapped to FHIR R4B element MolecularSequence.readCoverage as Equivalent. |
Sequence.repository |
MolecularSequence.repository | Element Sequence.repository is mapped to FHIR R4B element MolecularSequence.repository as Equivalent. |
Sequence.repository.type |
MolecularSequence.repository.type | Element Sequence.repository.type is mapped to FHIR R4B element MolecularSequence.repository.type as Equivalent. |
Sequence.repository.url |
MolecularSequence.repository.url | Element Sequence.repository.url is mapped to FHIR R4B element MolecularSequence.repository.url as Equivalent. |
Sequence.repository.name |
MolecularSequence.repository.name | Element Sequence.repository.name is mapped to FHIR R4B element MolecularSequence.repository.name as Equivalent. |
Sequence.repository.datasetId |
MolecularSequence.repository.datasetId | Element Sequence.repository.datasetId is mapped to FHIR R4B element MolecularSequence.repository.datasetId as Equivalent. |
Sequence.repository.variantsetId |
MolecularSequence.repository.variantsetId | Element Sequence.repository.variantsetId is mapped to FHIR R4B element MolecularSequence.repository.variantsetId as Equivalent. |
Sequence.repository.readsetId |
MolecularSequence.repository.readsetId | Element Sequence.repository.readsetId is mapped to FHIR R4B element MolecularSequence.repository.readsetId as Equivalent. |
Sequence.pointer |
MolecularSequence.pointer Standard Extension: alternate-reference |
Element Sequence.pointer is mapped to FHIR R4B element MolecularSequence.pointer as SourceIsBroaderThanTarget.The mappings for Sequence.pointer do not cover the following types based on type expansion: display, identifier, reference.The standard extension alternate-reference has been mapped as the representation of FHIR STU3 element Sequence.pointer with unmapped reference targets: Sequence. |
IG © 2025+ FHIR Infrastructure. Package hl7.fhir.uv.xver-r3.r4b#0.1.0 based on FHIR 4.3.0. Generated 2026-03-20
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