Extensions for Using Data Elements from FHIR DSTU2 in FHIR R5
0.1.0 - STU International flag

Extensions for Using Data Elements from FHIR DSTU2 in FHIR R5 - Downloaded Version null See the Directory of published versions

ConceptMap: R2SpecimenElementMapToR5

Official URL: http://hl7.org/fhir/uv/xver/ConceptMap/R2-Specimen-element-map-to-R5 Version: 0.1.0
Standards status: Trial-use Maturity Level: 0 Computable Name: R2SpecimenElementMapToR5

This ConceptMap represents cross-version mappings for elements from a FHIR DSTU2 Specimen to FHIR R5.

Mapping from http://hl7.org/fhir/1.0 to http://hl7.org/fhir/5.0


Group 1 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to Specimenversion: 5.0.0)

Source CodeRelationshipTarget CodeComment
Specimen.meta (meta)is broader thanSpecimen.metaElement `Specimen.meta` is mapped to FHIR R5 element `Specimen.meta` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.meta` do not cover the following types: Meta. The mappings for `Specimen.meta` do not cover the following types based on type expansion: lastUpdated, profile, security, tag, versionId.
Specimen.implicitRules (implicitRules)is equivalent toSpecimen.implicitRulesElement `Specimen.implicitRules` is mapped to FHIR R5 element `Specimen.implicitRules` as `Equivalent`. Asserting this rule set restricts the content to be only understood by a limited set of trading partners. This inherently limits the usefulness of the data in the long term. However, the existing health eco-system is highly fractured, and not yet ready to define, collect, and exchange data in a generally computable sense. Wherever possible, implementers and/or specification writers should avoid using this element as much as possible.
Specimen.language (language)is equivalent toSpecimen.languageElement `Specimen.language` is mapped to FHIR R5 element `Specimen.language` as `Equivalent`. Language is provided to support indexing and accessibility (typically, services such as text to speech use the language tag). The html language tag in the narrative applies to the narrative. The language tag on the resource may be used to specify the language of other presentations generated from the data in the resource Not all the content has to be in the base language. The Resource.language should not be assumed to apply to the narrative automatically. If a language is specified, it should it also be specified on the div element in the html (see rules in HTML5 for information about the relationship between xml:lang and the html lang attribute).
Specimen.text (text)is broader thanSpecimen.textElement `Specimen.text` is mapped to FHIR R5 element `Specimen.text` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.text` do not cover the following types: Narrative. The mappings for `Specimen.text` do not cover the following types based on type expansion: div, status. Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative.
Specimen.contained (contained)is equivalent toSpecimen.containedElement `Specimen.contained` is mapped to FHIR R5 element `Specimen.contained` as `SourceIsBroaderThanTarget`. This should never be done when the content can be identified properly, as once identification is lost, it is extremely difficult (and context dependent) to restore it again.
Specimen.identifier (identifier)is broader thanSpecimen.identifierElement `Specimen.identifier` is mapped to FHIR R5 element `Specimen.identifier` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.identifier` do not cover the following types: Identifier. The mappings for `Specimen.identifier` do not cover the following types based on type expansion: assigner, period, system, type, use, value.
Specimen.status (status)is equivalent toSpecimen.statusElement `Specimen.status` is mapped to FHIR R5 element `Specimen.status` as `Equivalent`.
Specimen.type (type)is equivalent toSpecimen.typeElement `Specimen.type` is mapped to FHIR R5 element `Specimen.type` as `Equivalent`. The type can change the way that a specimen is handled, and drives what kind of analyses can properly be performed on the specimen. It is frequently used in diagnostic work flow decision making systems.
Specimen.parent (parent)is broader thanSpecimen.parentElement `Specimen.parent` is mapped to FHIR R5 element `Specimen.parent` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.parent` do not cover the following types based on type expansion: display, reference. The standard extension `alternate-reference` has been mapped as the representation of FHIR DSTU2 element `Specimen.parent` with unmapped reference targets: Specimen. The parent specimen could be the source from which the current specimen is derived by some processing step (e.g. an aliquot or isolate or extracted nucleic acids from clinical samples) or one of many specimens that were combined to create a pooled sample.
Specimen.subject (subject)is broader thanSpecimen.subjectElement `Specimen.subject` is mapped to FHIR R5 element `Specimen.subject` as `SourceIsBroaderThanTarget`. The standard extension `alternate-reference` has been mapped as the representation of FHIR DSTU2 element `Specimen.subject` with unmapped reference targets: Device, Group, Patient, Substance.
Specimen.accessionIdentifier (accessionIdentifier)is broader thanSpecimen.accessionIdentifierElement `Specimen.accessionIdentifier` is mapped to FHIR R5 element `Specimen.accessionIdentifier` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.accessionIdentifier` do not cover the following types: Identifier. The mappings for `Specimen.accessionIdentifier` do not cover the following types based on type expansion: assigner, period, system, type, use, value.
Specimen.receivedTime (receivedTime)is equivalent toSpecimen.receivedTimeElement `Specimen.receivedTime` is mapped to FHIR R5 element `Specimen.receivedTime` as `Equivalent`.
Specimen.collection (collection)is broader thanSpecimen.collectionElement `Specimen.collection` is mapped to FHIR R5 element `Specimen.collection` as `Equivalent`.
Specimen.collection.collector (collector)is broader thanSpecimen.collection.collectorElement `Specimen.collection.collector` is mapped to FHIR R5 element `Specimen.collection.collector` as `RelatedTo`. The mappings for `Specimen.collection.collector` do not cover the following types based on type expansion: display, reference. The standard extension `alternate-reference` has been mapped as the representation of FHIR DSTU2 element `Specimen.collection.collector` with unmapped reference targets: Practitioner.
Specimen.collection.collected[x] (collected[x])is equivalent toSpecimen.collection.collected[x]Element `Specimen.collection.collected[x]` is mapped to FHIR R5 element `Specimen.collection.collected[x]` as `SourceIsBroaderThanTarget`. The target context `Specimen.collection.collected[x]` is a choice-type element and cannot directly hold extensions. The context is moved up to parent element `Specimen.collection`.
Specimen.collection.quantity (quantity)is equivalent toSpecimen.collection.quantityElement `Specimen.collection.quantity` is mapped to FHIR R5 element `Specimen.collection.quantity` as `Equivalent`.
Specimen.collection.method (method)is equivalent toSpecimen.collection.methodElement `Specimen.collection.method` is mapped to FHIR R5 element `Specimen.collection.method` as `Equivalent`.
Specimen.collection.bodySite (bodySite)is equivalent toSpecimen.collection.bodySiteElement `Specimen.collection.bodySite` is mapped to FHIR R5 element `Specimen.collection.bodySite` as `SourceIsNarrowerThanTarget`. If the use case requires BodySite to be handled as a separate resource instead of an inline coded element (e.g. to identify and track separately) then use the standard extension [body-site-instance](https://hl7.org/fhir/extension-body-site-instance.html).
Specimen.treatment (treatment)is broader thanSpecimen.processingElement `Specimen.treatment` is mapped to FHIR R5 element `Specimen.processing` as `Equivalent`.
Specimen.treatment.description (description)is equivalent toSpecimen.processing.descriptionElement `Specimen.treatment.description` is mapped to FHIR R5 element `Specimen.processing.description` as `Equivalent`.
Specimen.treatment.procedure (procedure)is equivalent toSpecimen.processing.methodElement `Specimen.treatment.procedure` is mapped to FHIR R5 element `Specimen.processing.method` as `Equivalent`.
Specimen.treatment.additive (additive)is broader thanSpecimen.processing.additiveElement `Specimen.treatment.additive` is mapped to FHIR R5 element `Specimen.processing.additive` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.treatment.additive` do not cover the following types based on type expansion: display, reference. The standard extension `alternate-reference` has been mapped as the representation of FHIR DSTU2 element `Specimen.treatment.additive` with unmapped reference targets: Substance.
Specimen.container (container)is broader thanSpecimen.containerElement `Specimen.container` is mapped to FHIR R5 element `Specimen.container` as `Equivalent`.
Specimen.container.specimenQuantity (specimenQuantity)is equivalent toSpecimen.container.specimenQuantityElement `Specimen.container.specimenQuantity` is mapped to FHIR R5 element `Specimen.container.specimenQuantity` as `Equivalent`.

Group 2 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: meta additional typesversion: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.meta (meta)is equivalent toExtension (DSTU2: meta additional types)Element `Specimen.meta` is mapped to FHIR R5 element `Specimen.meta` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.meta` do not cover the following types: Meta. The mappings for `Specimen.meta` do not cover the following types based on type expansion: lastUpdated, profile, security, tag, versionId.

Group 3 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: text additional typesversion: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.text (text)is equivalent toExtension (DSTU2: text additional types)Element `Specimen.text` is mapped to FHIR R5 element `Specimen.text` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.text` do not cover the following types: Narrative. The mappings for `Specimen.text` do not cover the following types based on type expansion: div, status. Contained resources do not have narrative. Resources that are not contained SHOULD have a narrative.

Group 4 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: identifier additional typesversion: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.identifier (identifier)is equivalent toExtension (DSTU2: identifier additional types)Element `Specimen.identifier` is mapped to FHIR R5 element `Specimen.identifier` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.identifier` do not cover the following types: Identifier. The mappings for `Specimen.identifier` do not cover the following types based on type expansion: assigner, period, system, type, use, value.

Group 5 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: accessionIdentifier additional typesversion: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.accessionIdentifier (accessionIdentifier)is equivalent toExtension (DSTU2: accessionIdentifier additional types)Element `Specimen.accessionIdentifier` is mapped to FHIR R5 element `Specimen.accessionIdentifier` as `SourceIsBroaderThanTarget`. The mappings for `Specimen.accessionIdentifier` do not cover the following types: Identifier. The mappings for `Specimen.accessionIdentifier` do not cover the following types based on type expansion: assigner, period, system, type, use, value.

Group 6 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: Collector comments (new)version: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.collection.comment (comment)is equivalent toExtension (DSTU2: Collector comments (new))Element `Specimen.collection.comment` has a context of Specimen.collection based on following the parent source element upwards and mapping to `Specimen`. Element `Specimen.collection.comment` has no mapping targets in FHIR R5. Typically, this is because the element has been added (is a new element).

Group 7 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: Id for the container (new)version: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.container.identifier (identifier)is equivalent toExtension (DSTU2: Id for the container (new))Element `Specimen.container.identifier` has a context of Specimen.container based on following the parent source element upwards and mapping to `Specimen`. Element `Specimen.container.identifier` has no mapping targets in FHIR R5. Typically, this is because the element has been added (is a new element).

Group 8 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: Textual description of the container (new)version: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.container.description (description)is equivalent toExtension (DSTU2: Textual description of the container (new))Element `Specimen.container.description` has a context of Specimen.container based on following the parent source element upwards and mapping to `Specimen`. Element `Specimen.container.description` has no mapping targets in FHIR R5. Typically, this is because the element has been added (is a new element).

Group 9 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: Kind of container directly associated with specimen (new)version: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.container.type (type)is equivalent toExtension (DSTU2: Kind of container directly associated with specimen (new))Element `Specimen.container.type` has a context of Specimen.container based on following the parent source element upwards and mapping to `Specimen`. Element `Specimen.container.type` has no mapping targets in FHIR R5. Typically, this is because the element has been added (is a new element).

Group 10 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: Container volume or size (new)version: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.container.capacity (capacity)is equivalent toExtension (DSTU2: Container volume or size (new))Element `Specimen.container.capacity` has a context of Specimen.container based on following the parent source element upwards and mapping to `Specimen`. Element `Specimen.container.capacity` has no mapping targets in FHIR R5. Typically, this is because the element has been added (is a new element).

Group 11 Mapping from http://hl7.org/fhir/StructureDefinition/Specimen|1.0.2 to DSTU2: Additive associated with container (new)version: 0.1.0)

Source CodeRelationshipTarget CodeComment
Specimen.container.additive[x] (additive[x])is equivalent toExtension (DSTU2: Additive associated with container (new))Element `Specimen.container.additive[x]` has a context of Specimen.container based on following the parent source element upwards and mapping to `Specimen`. Element `Specimen.container.additive[x]` has no mapping targets in FHIR R5. Typically, this is because the element has been added (is a new element).