Retrieval of Real World Data for Clinical Research
1.0.0 - trial-use International flag

This page is part of the Retrieval of Real World Data for Clinical Research (v1.0.0: STU1) based on FHIR R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

ValueSet: Covid-19 Example Test Codes (Experimental)

Official URL: http://hl7.org/fhir/uv/vulcan-rwd/ValueSet/ExampleCOVID19TestCodes Version: 1.0.0
Active as of 2023-05-26 Computable Name: ExampleCOVID19TestCodes

Copyright/Legal: This material contains content from LOINC (http://loinc.org). LOINC is copyright © 1995-2020, Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee and is available at no cost under the license at http://loinc.org/license. LOINC® is a registered United States trademark of Regenstrief Institute, Inc

An example value set of LOINC codes representing COVID-19 tests.

References

This value set is not used here; it may be used elsewhere (e.g. specifications and/or implementations that use this content)

Logical Definition (CLD)

  • Include these codes as defined in http://loinc.org
    CodeDisplay
    95209-3SARS-CoV+SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay
    94763-0SARS-CoV-2 (COVID-19) [Presence] in Specimen by Organism specific culture
    94762-2SARS-CoV-2 (COVID-19) Ab [Presence] in Serum or Plasma by Immunoassay
    94558-4SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay
    94562-6SARS-CoV-2 (COVID-19) IgA Ab [Presence] in Serum or Plasma by Immunoassay
    94768-9SARS-CoV-2 (COVID-19) IgA Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay
    95125-1SARS-CoV-2 (COVID-19) IgA+IgM [Presence] in Serum or Plasma by Immunoassay
    94761-4SARS-CoV-2 (COVID-19) IgG Ab [Presence] in DBS by Immunoassay
    94563-4SARS-CoV-2 (COVID-19) IgG Ab [Presence] in Serum or Plasma by Immunoassay
    94507-1SARS-CoV-2 (COVID-19) IgG Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay
    94547-7SARS-CoV-2 (COVID-19) IgG+IgM Ab [Presence] in Serum or Plasma by Immunoassay
    95416-4SARS-CoV-2 (COVID-19) IgM Ab [Presence] in DBS by Immunoassay
    94564-2SARS-CoV-2 (COVID-19) IgM Ab [Presence] in Serum or Plasma by Immunoassay
    94508-9SARS-CoV-2 (COVID-19) IgM Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay
    94760-6SARS-CoV-2 (COVID-19) N gene [Presence] in Nasopharynx by NAA with probe detection
    95409-9SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with probe detection
    94533-7SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection
    94756-4SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N1
    94757-2SARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N2
    94766-3SARS-CoV-2 (COVID-19) N gene [Presence] in Serum or Plasma by NAA with probe detection
    94316-7SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by NAA with probe detection
    94307-6SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N1
    94308-4SARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N2
    95411-5SARS-CoV-2 (COVID-19) neutralizing antibody [Presence] in Serum by pVNT
    94559-2SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection
    94639-2SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Specimen by NAA with probe detection
    94534-5SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection
    94314-2SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Specimen by NAA with probe detection
    94565-9SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with non-probe detection
    94759-8SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection
    95406-5SARS-CoV-2 (COVID-19) RNA [Presence] in Nose by NAA with probe detection
    94500-6SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection
    94845-5SARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by NAA with probe detection
    94822-4SARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by Sequencing
    94660-8SARS-CoV-2 (COVID-19) RNA [Presence] in Serum or Plasma by NAA with probe detection
    94309-2SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen by NAA with probe detection
    94640-0SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory specimen by NAA with probe detection
    94767-1SARS-CoV-2 (COVID-19) S gene [Presence] in Serum or Plasma by NAA with probe detection
    94641-8SARS-CoV-2 (COVID-19) S gene [Presence] in Specimen by NAA with probe detection
    95825-6SARS-CoV-2 (COVID-19) Ab [Presence] in DBS by Immunoassay
    95542-7SARS-CoV-2 (COVID-19) Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay
    96119-3SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Immunoassay
    95425-5SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by NAA with probe detection
    96448-6SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N1
    95824-9SARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Saliva (oral fluid) by NAA with probe detection
    96120-1SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Lower respiratory specimen by NAA with probe detection
    96091-4SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Saliva (oral fluid) by NAA with probe detection
    96123-5SARS-CoV-2 (COVID-19) RdRp gene [Presence] in Upper respiratory specimen by NAA with probe detection
    95608-6SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with non-probe detection
    95424-8SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by Sequencing
    95609-4SARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory specimen by Sequencing
    96603-6SARS-CoV-2 (COVID-19) S protein RBD neutralizing antibody [Presence] in Serum or Plasma by sVNT
    95970-0SARS-CoV-2 (COVID-19) specific TCRB gene rearrangements [Presence] in Blood by Sequencing
    95971-8SARS-CoV-2 stimulated gamma interferon [Presence] in Blood
    96121-9SARS-related coronavirus E gene [Presence] in Lower respiratory specimen by NAA with probe detection
    95823-1SARS-related coronavirus E gene [Presence] in Saliva (oral fluid) by NAA with probe detection
    96122-7SARS-related coronavirus E gene [Presence] in Upper respiratory specimen by NAA with probe detection
    97097-0SARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Rapid immunoassay
    96763-8SARS-CoV-2 (COVID-19) E gene [Presence] in Respiratory specimen by NAA with probe detection
    96957-6SARS-CoV-2 (COVID-19) M gene [Presence] in Upper respiratory specimen by NAA with probe detection
    96986-5SARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with non-probe detection
    96958-4SARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N2
    97098-8SARS-CoV-2 (COVID-19) Nsp2 gene [Presence] in Upper respiratory specimen by NAA with probe detection
    96797-6SARS-CoV-2 (COVID-19) RNA [Presence] in Oropharyngeal wash by NAA with probe detection
    96829-7SARS-CoV-2 (COVID-19) RNA [Presence] in Specimen from Donor by NAA with probe detection
    96765-3SARS-CoV-2 (COVID-19) S gene [Presence] in Saliva (oral fluid) by NAA with probe detection
    96752-1SARS-CoV-2 (COVID-19) S gene mutation [Presence] in Specimen by Molecular genetics method
    98069-8SARS-CoV-2 (COVID-19) Ab [Presence] in Saliva (oral fluid) by Rapid immunoassay
    98132-4SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Respiratory specimen by NAA with probe detection
    98494-8SARS-CoV-2 (COVID-19) ORF1a region [Presence] in Saliva (oral fluid) by NAA with probe detection
    98131-6SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Respiratory specimen by NAA with probe detection
    98493-0SARS-CoV-2 (COVID-19) ORF1b region [Presence] in Saliva (oral fluid) by NAA with probe detection
    99596-9SARS-CoV-2 (COVID-19) N protein IgG Ab [Presence] in Serum or Plasma by Immunoassay
    99597-7SARS-CoV-2 (COVID-19) S protein IgG Ab [Presence] in Serum or Plasma by Immunoassay
    99772-6SARS-CoV-2 stimulated gamma interferon [Interpretation] in Blood Qualitative

 

Expansion

This value set contains 75 concepts

Expansion based on Loinc v2.74

CodeSystemDisplay
  95209-3http://loinc.orgSARS-CoV+SARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay
  94763-0http://loinc.orgSARS-CoV-2 (COVID-19) [Presence] in Specimen by Organism specific culture
  94762-2http://loinc.orgSARS-CoV-2 (COVID-19) Ab [Presence] in Serum or Plasma by Immunoassay
  94558-4http://loinc.orgSARS-CoV-2 (COVID-19) Ag [Presence] in Respiratory specimen by Rapid immunoassay
  94562-6http://loinc.orgSARS-CoV-2 (COVID-19) IgA Ab [Presence] in Serum or Plasma by Immunoassay
  94768-9http://loinc.orgSARS-CoV-2 (COVID-19) IgA Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay
  95125-1http://loinc.orgSARS-CoV-2 (COVID-19) IgA+IgM [Presence] in Serum or Plasma by Immunoassay
  94761-4http://loinc.orgSARS-CoV-2 (COVID-19) IgG Ab [Presence] in DBS by Immunoassay
  94563-4http://loinc.orgSARS-CoV-2 (COVID-19) IgG Ab [Presence] in Serum or Plasma by Immunoassay
  94507-1http://loinc.orgSARS-CoV-2 (COVID-19) IgG Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay
  94547-7http://loinc.orgSARS-CoV-2 (COVID-19) IgG+IgM Ab [Presence] in Serum or Plasma by Immunoassay
  95416-4http://loinc.orgSARS-CoV-2 (COVID-19) IgM Ab [Presence] in DBS by Immunoassay
  94564-2http://loinc.orgSARS-CoV-2 (COVID-19) IgM Ab [Presence] in Serum or Plasma by Immunoassay
  94508-9http://loinc.orgSARS-CoV-2 (COVID-19) IgM Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay
  94760-6http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Nasopharynx by NAA with probe detection
  95409-9http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with probe detection
  94533-7http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by NAA with probe detection
  94756-4http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N1
  94757-2http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Respiratory specimen by Nucleic acid amplification using CDC primer-probe set N2
  94766-3http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Serum or Plasma by NAA with probe detection
  94316-7http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by NAA with probe detection
  94307-6http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N1
  94308-4http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Specimen by Nucleic acid amplification using CDC primer-probe set N2
  95411-5http://loinc.orgSARS-CoV-2 (COVID-19) neutralizing antibody [Presence] in Serum by pVNT
  94559-2http://loinc.orgSARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Respiratory specimen by NAA with probe detection
  94639-2http://loinc.orgSARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Specimen by NAA with probe detection
  94534-5http://loinc.orgSARS-CoV-2 (COVID-19) RdRp gene [Presence] in Respiratory specimen by NAA with probe detection
  94314-2http://loinc.orgSARS-CoV-2 (COVID-19) RdRp gene [Presence] in Specimen by NAA with probe detection
  94565-9http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with non-probe detection
  94759-8http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection
  95406-5http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Nose by NAA with probe detection
  94500-6http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with probe detection
  94845-5http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by NAA with probe detection
  94822-4http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Saliva (oral fluid) by Sequencing
  94660-8http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Serum or Plasma by NAA with probe detection
  94309-2http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Specimen by NAA with probe detection
  94640-0http://loinc.orgSARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory specimen by NAA with probe detection
  94767-1http://loinc.orgSARS-CoV-2 (COVID-19) S gene [Presence] in Serum or Plasma by NAA with probe detection
  94641-8http://loinc.orgSARS-CoV-2 (COVID-19) S gene [Presence] in Specimen by NAA with probe detection
  95825-6http://loinc.orgSARS-CoV-2 (COVID-19) Ab [Presence] in DBS by Immunoassay
  95542-7http://loinc.orgSARS-CoV-2 (COVID-19) Ab [Presence] in Serum, Plasma or Blood by Rapid immunoassay
  96119-3http://loinc.orgSARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Immunoassay
  95425-5http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by NAA with probe detection
  96448-6http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N1
  95824-9http://loinc.orgSARS-CoV-2 (COVID-19) ORF1ab region [Presence] in Saliva (oral fluid) by NAA with probe detection
  96120-1http://loinc.orgSARS-CoV-2 (COVID-19) RdRp gene [Presence] in Lower respiratory specimen by NAA with probe detection
  96091-4http://loinc.orgSARS-CoV-2 (COVID-19) RdRp gene [Presence] in Saliva (oral fluid) by NAA with probe detection
  96123-5http://loinc.orgSARS-CoV-2 (COVID-19) RdRp gene [Presence] in Upper respiratory specimen by NAA with probe detection
  95608-6http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by NAA with non-probe detection
  95424-8http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory specimen by Sequencing
  95609-4http://loinc.orgSARS-CoV-2 (COVID-19) S gene [Presence] in Respiratory specimen by Sequencing
  96603-6http://loinc.orgSARS-CoV-2 (COVID-19) S protein RBD neutralizing antibody [Presence] in Serum or Plasma by sVNT
  95970-0http://loinc.orgSARS-CoV-2 (COVID-19) specific TCRB gene rearrangements [Presence] in Blood by Sequencing
  95971-8http://loinc.orgSARS-CoV-2 stimulated gamma interferon [Presence] in Blood
  96121-9http://loinc.orgSARS-related coronavirus E gene [Presence] in Lower respiratory specimen by NAA with probe detection
  95823-1http://loinc.orgSARS-related coronavirus E gene [Presence] in Saliva (oral fluid) by NAA with probe detection
  96122-7http://loinc.orgSARS-related coronavirus E gene [Presence] in Upper respiratory specimen by NAA with probe detection
  97097-0http://loinc.orgSARS-CoV-2 (COVID-19) Ag [Presence] in Upper respiratory specimen by Rapid immunoassay
  96763-8http://loinc.orgSARS-CoV-2 (COVID-19) E gene [Presence] in Respiratory specimen by NAA with probe detection
  96957-6http://loinc.orgSARS-CoV-2 (COVID-19) M gene [Presence] in Upper respiratory specimen by NAA with probe detection
  96986-5http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Nose by NAA with non-probe detection
  96958-4http://loinc.orgSARS-CoV-2 (COVID-19) N gene [Presence] in Saliva (oral fluid) by Nucleic acid amplification using CDC primer-probe set N2
  97098-8http://loinc.orgSARS-CoV-2 (COVID-19) Nsp2 gene [Presence] in Upper respiratory specimen by NAA with probe detection
  96797-6http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Oropharyngeal wash by NAA with probe detection
  96829-7http://loinc.orgSARS-CoV-2 (COVID-19) RNA [Presence] in Specimen from Donor by NAA with probe detection
  96765-3http://loinc.orgSARS-CoV-2 (COVID-19) S gene [Presence] in Saliva (oral fluid) by NAA with probe detection
  96752-1http://loinc.orgSARS-CoV-2 (COVID-19) S gene mutation [Presence] in Specimen by Molecular genetics method
  98069-8http://loinc.orgSARS-CoV-2 (COVID-19) Ab [Presence] in Saliva (oral fluid) by Rapid immunoassay
  98132-4http://loinc.orgSARS-CoV-2 (COVID-19) ORF1a region [Presence] in Respiratory specimen by NAA with probe detection
  98494-8http://loinc.orgSARS-CoV-2 (COVID-19) ORF1a region [Presence] in Saliva (oral fluid) by NAA with probe detection
  98131-6http://loinc.orgSARS-CoV-2 (COVID-19) ORF1b region [Presence] in Respiratory specimen by NAA with probe detection
  98493-0http://loinc.orgSARS-CoV-2 (COVID-19) ORF1b region [Presence] in Saliva (oral fluid) by NAA with probe detection
  99596-9http://loinc.orgSARS-CoV-2 (COVID-19) N protein IgG Ab [Presence] in Serum or Plasma by Immunoassay
  99597-7http://loinc.orgSARS-CoV-2 (COVID-19) S protein IgG Ab [Presence] in Serum or Plasma by Immunoassay
  99772-6http://loinc.orgSARS-CoV-2 stimulated gamma interferon [Interpretation] in Blood Qualitative

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code