This page is part of the International Patient Summary Implementation Guide (v1.0.0: STU 1) based on FHIR R4. The current version which supercedes this version is 1.1.0. For a full list of available versions, see the Directory of published versions
Source view
<ValueSet xmlns="http://hl7.org/fhir"> <id value="results-organism-gps-uv-ips"/> <meta> <profile value="http://hl7.org/fhir/StructureDefinition/shareablevalueset"/> </meta> <text> <status value="additional"/> <div xmlns="http://www.w3.org/1999/xhtml"> <div id="cld"> <p>This value set has a large enumerated (extensional) definition. See "Definition" in the table above for the definition description. The full definition is available in the resource instance (see links in "Source Resource" in the table above).</p> </div> </div> </text> <url value="http://hl7.org/fhir/uv/ips/ValueSet/results-organism-gps-uv-ips"/> <identifier> <use value="official"/> <system value="http://art-decor.org/ns/oids/vs"/> <value value="2.16.840.1.113883.11.22.49"/> </identifier> <version value="1.0.0"/> <name value="ResultsOrganismGpsUvIps"/> <title value="Results Organism (GPS) - IPS"/> <status value="active"/> <experimental value="false"/> <date value="2020-05-19T18:37:29+00:00"/> <publisher value="Health Level Seven International - Patient Care Work Group"/> <contact> <telecom> <system value="url"/> <value value="http://www.hl7.org/Special/committees/patientcare"/> </telecom> </contact> <description value="This is a value set of the SNOMED CT organism concepts contained in the SNOMED CT Global Patient Set (GPS) for use in the Results section observation values. The concepts currently included in the value set are from the September 2019 release of the GPS, which is based on the July 2019 SNOMED CT International Edition release. This value set additionally contains the recently added SNOMED CT concept for the Coronavirus organism from the March 2020 Interim International Release."/> <jurisdiction> <coding> <system value="http://unstats.un.org/unsd/methods/m49/m49.htm"/> <code value="001"/> </coding> </jurisdiction> <immutable value="false"/> <copyright value="The GPS is produced by SNOMED International under the terms of the [Creative Commons Attribution 4.0 International Public License](https://creativecommons.org/licenses/by/4.0/) Additional information about this license specific to SNOMED International’s release of the GPS: * SNOMED CT is © and ® SNOMED International. The right to maintain the GPS remains vested exclusively in SNOMED International. * The Licensee can redistribute the GPS. * The Licensee can create derivatives or implementation-related products and services based on the GPS. * The Licensee cannot claim that SNOMED International or any of its Members endorses the Licensee’s derivative because it uses content from the GPS. * Neither SNOMED International nor any of the contributors accept any liability for the Licensee’s use or redistribution of the GPS. * SNOMED CT® was originally created by the College of American Pathologists. Without obtaining prior written permission from SNOMED International, you are expressly prohibited from using, distributing or reproducing the SNOMED International, SNOMED CT or SNOMED GPS logo, service mark or trademark. Please review all terms and conditions of use [here](http://www.snomed.org/terms-and-conditions)."/> <compose> <include> <system value="http://snomed.info/sct"/> <version value="http://snomed.info/sct/900000000000207008/version/20190731"/> <concept> <code value="36833002"/> <display value="Rotavirus group G (organism)"/> </concept> <concept> <code value="19030005"/> <display value="Human immunodeficiency virus (organism)"/> </concept> <concept> <code value="5210005"/> <display value="Rubella virus (organism)"/> </concept> <concept> <code value="427398000"/> <display value="Rubella virus genotype 1C (organism)"/> </concept> <concept> <code value="34348001"/> <display value="Dengue virus (organism)"/> </concept> <concept> <code value="8467002"/> <display value="Dengue virus, type 3 (organism)"/> </concept> <concept> <code value="603429002"/> <display value="Hepatitis C virus subtype 2c (organism)"/> </concept> <concept> <code value="603426009"/> <display value="Hepatitis C virus genotype 5 (organism)"/> </concept> <concept> <code value="407479009"/> <display value="Influenza A virus (organism)"/> </concept> <concept> <code value="442352004"/> <display value="Influenza A virus subtype H1N1 (organism)"/> </concept> <concept> <code value="49445003"/> <display value="Genus Hantavirus (organism)"/> </concept> <concept> <code value="52779006"/> <display value="Hantaan virus (organism)"/> </concept> <concept> <code value="87919008"/> <display value="Trivittatus virus (organism)"/> </concept> <concept> <code value="52584002"/> <display value="Measles morbillivirus (organism)"/> </concept> <concept> <code value="426424002"/> <display value="Measles virus genotype H2 (organism)"/> </concept> <concept> <code value="732207007"/> <display value="Measles virus genotype E (organism)"/> </concept> <concept> <code value="417793006"/> <display value="Human respiratory syncytial virus GA7 (organism)"/> </concept> <concept> <code value="417795004"/> <display value="Human respiratory syncytial virus GB2 (organism)"/> </concept> <concept> <code value="42024000"/> <display value="Murine poliovirus (organism)"/> </concept> <concept> <code value="22580008"/> <display value="Human poliovirus 1 (organism)"/> </concept> <concept> <code value="725471006"/> <display value="Varicella-zoster virus clade 3 (organism)"/> </concept> <concept> <code value="112381006"/> <display value="Genus Dependovirus (organism)"/> </concept> <concept> <code value="312410004"/> <display value="Variola major virus (organism)"/> </concept> <concept> <code value="68638009"/> <display value="Bovine spongiform encephalopathy agent (organism)"/> </concept> <concept> <code value="50255000"/> <display value="Genus Francisella (organism)"/> </concept> <concept> <code value="7527002"/> <display value="Genus Legionella (organism)"/> </concept> <concept> <code value="28109006"/> <display value="Legionella erythra (organism)"/> </concept> <concept> <code value="103464004"/> <display value="Legionella pneumophila serogroup 2 (organism)"/> </concept> <concept> <code value="103471009"/> <display value="Legionella pneumophila serogroup 9 (organism)"/> </concept> <concept> <code value="115516002"/> <display value="Legionella longbeachae, serogroup 2 (organism)"/> </concept> <concept> <code value="89709001"/> <display value="Legionella jamestowniensis (organism)"/> </concept> <concept> <code value="103450004"/> <display value="Legionella geestiana (organism)"/> </concept> <concept> <code value="103451000"/> <display value="Legionella gratiana (organism)"/> </concept> <concept> <code value="103462000"/> <display value="Legionella worsleiensis (organism)"/> </concept> <concept> <code value="116379006"/> <display value="Legionella maceachernii (organism)"/> </concept> <concept> <code value="432713006"/> <display value="Legionella rowbothamii (organism)"/> </concept> <concept> <code value="430983003"/> <display value="Brucella abortus, vaccinal strain RB51 (organism)"/> </concept> <concept> <code value="48317004"/> <display value="Brucella suis (organism)"/> </concept> <concept> <code value="449411006"/> <display value="Brucella inopinata (organism)"/> </concept> <concept> <code value="83723009"/> <display value="Mycobacterium avium (organism)"/> </concept> <concept> <code value="113852009"/> <display value="Mycobacterium intermedium (organism)"/> </concept> <concept> <code value="113853004"/> <display value="Mycobacterium lentiflavum (organism)"/> </concept> <concept> <code value="113860005"/> <display value="Mycobacterium triplex (organism)"/> </concept> <concept> <code value="84180005"/> <display value="Mycobacterium simiae (organism)"/> </concept> <concept> <code value="27365009"/> <display value="Mycobacterium austroafricanum (organism)"/> </concept> <concept> <code value="54925005"/> <display value="Mycobacterium vaccae (organism)"/> </concept> <concept> <code value="66838002"/> <display value="Mycobacterium duvalii (organism)"/> </concept> <concept> <code value="78112006"/> <display value="Mycobacterium phlei (organism)"/> </concept> <concept> <code value="89896008"/> <display value="Mycobacterium chitae (organism)"/> </concept> <concept> <code value="243378003"/> <display value="Mycobacterium fortuitum (organism)"/> </concept> <concept> <code value="113846008"/> <display value="Mycobacterium conspicuum (organism)"/> </concept> <concept> <code value="51320008"/> <display value="Mycobacterium africanum (organism)"/> </concept> <concept> <code value="414789006"/> <display value="Mycobacterium canetti (organism)"/> </concept> <concept> <code value="708341008"/> <display value="Mycobacterium llatzerense (organism)"/> </concept> <concept> <code value="708346003"/> <display value="Mycobacterium florentinum (organism)"/> </concept> <concept> <code value="709682006"/> <display value="Mycobacterium iranicum (organism)"/> </concept> <concept> <code value="712912008"/> <display value="Mycobacterium heraklionense (organism)"/> </concept> <concept> <code value="698168002"/> <display value="Streptococcus agalactiae serotype II (organism)"/> </concept> <concept> <code value="698176000"/> <display value="Streptococcus agalactiae serotype NT/R (organism)"/> </concept> <concept> <code value="80166006"/> <display value="Streptococcus pyogenes (organism)"/> </concept> <concept> <code value="429337002"/> <display value="Streptococcus pyogenes type emm89 (organism)"/> </concept> <concept> <code value="438978005"/> <display value="Streptococcus pyogenes type emm44 (organism)"/> </concept> <concept> <code value="442799009"/> <display value="Streptococcus pyogenes type emm41 (organism)"/> </concept> <concept> <code value="442800008"/> <display value="Streptococcus pyogenes type emm40 (organism)"/> </concept> <concept> <code value="442814008"/> <display value="Streptococcus pyogenes type emm97 (organism)"/> </concept> <concept> <code value="442820009"/> <display value="Streptococcus pyogenes type emm91 (organism)"/> </concept> <concept> <code value="442851002"/> <display value="Streptococcus pyogenes type emm50 (organism)"/> </concept> <concept> <code value="442857003"/> <display value="Streptococcus pyogenes type emm80 (organism)"/> </concept> <concept> <code value="442896009"/> <display value="Streptococcus pyogenes type emm17 (organism)"/> </concept> <concept> <code value="442922000"/> <display value="Streptococcus pyogenes type emm20 (organism)"/> </concept> <concept> <code value="442953003"/> <display value="Streptococcus pyogenes type emm72 (organism)"/> </concept> <concept> <code value="443007002"/> <display value="Streptococcus pyogenes type emm55 (organism)"/> </concept> <concept> <code value="698152008"/> <display value="Streptococcus pyogenes type emm102 (organism)"/> </concept> <concept> <code value="698158007"/> <display value="Streptococcus pyogenes type emm108 (organism)"/> </concept> <concept> <code value="698160009"/> <display value="Streptococcus pyogenes type emm110 (organism)"/> </concept> <concept> <code value="116500005"/> <display value="Streptococcus pneumoniae serogroup 12 (organism)"/> </concept> <concept> <code value="363767003"/> <display value="Streptococcus pneumoniae serogroup 22 (organism)"/> </concept> <concept> <code value="698104003"/> <display value="Streptococcus pneumoniae Danish serotype 11B (organism)"/> </concept> <concept> <code value="698105002"/> <display value="Streptococcus pneumoniae Danish serotype 11C (organism)"/> </concept> <concept> <code value="415607008"/> <display value="Streptococcus pneumoniae Danish serotype 1 (organism)"/> </concept> <concept> <code value="415610001"/> <display value="Streptococcus pneumoniae Danish serotype 15B (organism)"/> </concept> <concept> <code value="418759005"/> <display value="Streptococcus pneumoniae Danish serotype 8 (organism)"/> </concept> <concept> <code value="698097002"/> <display value="Streptococcus pneumoniae Danish serotype 21 (organism)"/> </concept> <concept> <code value="767281005"/> <display value="Streptococcus pneumoniae Danish serotype 46 (organism)"/> </concept> <concept> <code value="767285001"/> <display value="Streptococcus pneumoniae Danish serotype 42 (organism)"/> </concept> <concept> <code value="113961008"/> <display value="Staphylococcus aureus ss aureus (organism)"/> </concept> <concept> <code value="406962002"/> <display value="Vancomycin intermediate Staphylococcus aureus (organism)"/> </concept> <concept> <code value="417943000"/> <display value="Methicillin susceptible Staphylococcus aureus (organism)"/> </concept> <concept> <code value="710564002"/> <display value="Panton-Valentine leukocidin producing Staphylococcus aureus (organism)"/> </concept> <concept> <code value="32829006"/> <display value="Clostridium botulinum, type F (organism)"/> </concept> <concept> <code value="720720007"/> <display value="Clostridium botulinum Group II type F (organism)"/> </concept> <concept> <code value="720323007"/> <display value="Clostridium botulinum Group III type D (organism)"/> </concept> <concept> <code value="720711003"/> <display value="Clostridium botulinum Group IV (organism)"/> </concept> <concept> <code value="36094007"/> <display value="Listeria monocytogenes (organism)"/> </concept> <concept> <code value="698150000"/> <display value="Listeria monocytogenes serotype 4bx (organism)"/> </concept> <concept> <code value="13755001"/> <display value="Corynebacterium diphtheriae type mitis (organism)"/> </concept> <concept> <code value="443377006"/> <display value="Toxigenic Corynebacterium diphtheriae (organism)"/> </concept> <concept> <code value="2785000"/> <display value="Genus Enterococcus (organism)"/> </concept> <concept> <code value="707769000"/> <display value="Enterococcus faecium genotype vanB (organism)"/> </concept> <concept> <code value="30949009"/> <display value="Enterococcus casseliflavus (organism)"/> </concept> <concept> <code value="38004008"/> <display value="Enterococcus mundtii (organism)"/> </concept> <concept> <code value="73852008"/> <display value="Enterococcus hirae (organism)"/> </concept> <concept> <code value="103479006"/> <display value="Neisseria meningitidis serogroup A (organism)"/> </concept> <concept> <code value="103482001"/> <display value="Neisseria meningitidis serogroup Y (organism)"/> </concept> <concept> <code value="698162001"/> <display value="Neisseria meningitidis serogroup E (organism)"/> </concept> <concept> <code value="277504006"/> <display value="Spectinomycin-resistant Neisseria gonorrhoeae (organism)"/> </concept> <concept> <code value="414809001"/> <display value="Neisseria gonorrhoeae, beta lactamase negative (organism)"/> </concept> <concept> <code value="16241000"/> <display value="Genus Chlamydia (organism)"/> </concept> <concept> <code value="115295000"/> <display value="Chlamydia trachomatis, serotype F (organism)"/> </concept> <concept> <code value="115328009"/> <display value="Chlamydia trachomatis, serotype H (organism)"/> </concept> <concept> <code value="127510005"/> <display value="Haemophilus influenzae, biotype VI (organism)"/> </concept> <concept> <code value="103510000"/> <display value="Bartonella henselae (organism)"/> </concept> <concept> <code value="103512008"/> <display value="Bartonella vinsonii (organism)"/> </concept> <concept> <code value="114229008"/> <display value="Bartonella vinsonii ss vinsonii (organism)"/> </concept> <concept> <code value="103430003"/> <display value="Yersinia enterocolitica serogroup O:3 (organism)"/> </concept> <concept> <code value="720804005"/> <display value="Yersinia enterocolitica biotype 4 serotype O:3 (organism)"/> </concept> <concept> <code value="720779006"/> <display value="Yersinia enterocolitica biotype 1A serotype O:5 (organism)"/> </concept> <concept> <code value="720794005"/> <display value="Yersinia enterocolitica biotype 1B serotype O:8 (organism)"/> </concept> <concept> <code value="415859000"/> <display value="Yersinia enterocolitica serogroup O:20 (organism)"/> </concept> <concept> <code value="720780009"/> <display value="Yersinia enterocolitica biotype 1A serotype O:6,30 (organism)"/> </concept> <concept> <code value="720784000"/> <display value="Yersinia enterocolitica biotype 1A serotype O:7,13 (organism)"/> </concept> <concept> <code value="720775000"/> <display value="Yersinia enterocolitica serogroup O:1,2,3 (organism)"/> </concept> <concept> <code value="720785004"/> <display value="Yersinia enterocolitica serogroup O:7,13 (organism)"/> </concept> <concept> <code value="398371005"/> <display value="Salmonella enterica subsp. houtenae (organism)"/> </concept> <concept> <code value="398428002"/> <display value="Salmonella enterica subsp. diarizonae (organism)"/> </concept> <concept> <code value="398436006"/> <display value="Salmonella group O:3,10 (organism)"/> </concept> <concept> <code value="50136005"/> <display value="Salmonella Typhimurium (organism)"/> </concept> <concept> <code value="407160000"/> <display value="Enterohemorrhagic Escherichia coli, serotype O111:H2 (organism)"/> </concept> <concept> <code value="407251000"/> <display value="Enterohemorrhagic Escherichia coli, serotype O1:nonmotile (organism)"/> </concept> <concept> <code value="407267006"/> <display value="Enterohemorrhagic Escherichia coli, serotype O45:H2 (organism)"/> </concept> <concept> <code value="407306002"/> <display value="Enterohemorrhagic Escherichia coli, serotype O165:H25 (organism)"/> </concept> <concept> <code value="407266002"/> <display value="Escherichia coli serogroup O45 (organism)"/> </concept> <concept> <code value="406504006"/> <display value="Shigella sonnei (Subgroup D) (organism)"/> </concept> <concept> <code value="124999008"/> <display value="Shigella dysenteriae, serovar 5 (organism)"/> </concept> <concept> <code value="406496004"/> <display value="Shigella dysenteriae 13 (organism)"/> </concept> <concept> <code value="406497008"/> <display value="Shigella dysenteriae 15 (organism)"/> </concept> <concept> <code value="125022001"/> <display value="Shigella boydii, serovar 1 (organism)"/> </concept> <concept> <code value="125023006"/> <display value="Shigella boydii, serovar 2 (organism)"/> </concept> <concept> <code value="406492002"/> <display value="Shigella boydii 20 [Provisional Serotype SH108(99-4528)] (organism)"/> </concept> <concept> <code value="125005003"/> <display value="Shigella flexneri, serovar 1 (organism)"/> </concept> <concept> <code value="125007006"/> <display value="Shigella flexneri, serovar 1b (organism)"/> </concept> <concept> <code value="125009009"/> <display value="Shigella flexneri, serovar 2a (organism)"/> </concept> <concept> <code value="125017001"/> <display value="Shigella flexneri, serovar 4b (organism)"/> </concept> <concept> <code value="406500002"/> <display value="Shigella flexneri 4c [IV:7,8] (organism)"/> </concept> <concept> <code value="406501003"/> <display value="Shigella flexneri 5a [V:3,4] (organism)"/> </concept> <concept> <code value="406480002"/> <display value="Provisional shigella 88-893 [-: (6)] (organism)"/> </concept> <concept> <code value="34872001"/> <display value="Genus Vibrio (organism)"/> </concept> <concept> <code value="28382009"/> <display value="Vibrio metschnikovii (organism)"/> </concept> <concept> <code value="55905000"/> <display value="Vibrio vulnificus (organism)"/> </concept> <concept> <code value="372926008"/> <display value="Genus Chlamydophila (organism)"/> </concept> <concept> <code value="116399000"/> <display value="Burkholderia pseudomallei (organism)"/> </concept> <concept> <code value="91524009"/> <display value="Campylobacter sputorum (organism)"/> </concept> <concept> <code value="113528007"/> <display value="Campylobacter gracilis (organism)"/> </concept> <concept> <code value="446191000"/> <display value="Campylobacter lari subspecies concheus (organism)"/> </concept> <concept> <code value="448130009"/> <display value="Campylobacter avium (organism)"/> </concept> <concept> <code value="112277009"/> <display value="Genus Borrelia (organism)"/> </concept> <concept> <code value="113497007"/> <display value="Borrelia garinii (organism)"/> </concept> <concept> <code value="78167007"/> <display value="Larva of genus Taenia (organism)"/> </concept> <concept> <code value="36855005"/> <display value="Canis lupus (organism)"/> </concept> <concept> <code value="1514007"/> <display value="Bedlington terrier (organism)"/> </concept> <concept> <code value="26332008"/> <display value="Norwich terrier (organism)"/> </concept> <concept> <code value="32591006"/> <display value="Kerry blue terrier (organism)"/> </concept> <concept> <code value="8351009"/> <display value="Smooth fox terrier (organism)"/> </concept> <concept> <code value="40727008"/> <display value="West Highland white terrier (organism)"/> </concept> <concept> <code value="49421002"/> <display value="Welsh terrier (organism)"/> </concept> <concept> <code value="75494002"/> <display value="Irish terrier (organism)"/> </concept> <concept> <code value="79295007"/> <display value="Boston terrier (organism)"/> </concept> <concept> <code value="132423001"/> <display value="English Toy Terrier dog breed (organism)"/> </concept> <concept> <code value="132504005"/> <display value="Jagdterrier dog breed (organism)"/> </concept> <concept> <code value="132528007"/> <display value="American Hairless Terrier dog breed (organism)"/> </concept> <concept> <code value="132574006"/> <display value="Rat Terrier dog breed (organism)"/> </concept> <concept> <code value="132644008"/> <display value="Glen of Imaal Terrier dog breed (organism)"/> </concept> <concept> <code value="1974006"/> <display value="Retriever (organism)"/> </concept> <concept> <code value="58108001"/> <display value="Golden retriever (organism)"/> </concept> <concept> <code value="56243001"/> <display value="Wirehaired miniature dachshund (organism)"/> </concept> <concept> <code value="9761009"/> <display value="Chihuahua superbreed (organism)"/> </concept> <concept> <code value="14245006"/> <display value="Rottweiler dog (organism)"/> </concept> <concept> <code value="14876008"/> <display value="Pharaoh hound (organism)"/> </concept> <concept> <code value="19078005"/> <display value="Collie (organism)"/> </concept> <concept> <code value="58341007"/> <display value="Rough and smooth collie (organism)"/> </concept> <concept> <code value="36438004"/> <display value="Lhasa apso (organism)"/> </concept> <concept> <code value="82206008"/> <display value="Black cocker spaniel (organism)"/> </concept> <concept> <code value="56984005"/> <display value="Drever dog (organism)"/> </concept> <concept> <code value="61286000"/> <display value="Pudelpointer (organism)"/> </concept> <concept> <code value="66495005"/> <display value="Cavalier King Charles spaniel (organism)"/> </concept> <concept> <code value="66712005"/> <display value="Bouvier des Flandres (organism)"/> </concept> <concept> <code value="1420005"/> <display value="German longhaired pointer (organism)"/> </concept> <concept> <code value="25171009"/> <display value="Redbone coonhound (organism)"/> </concept> <concept> <code value="74173000"/> <display value="Rhodesian ridgeback dog (organism)"/> </concept> <concept> <code value="76554006"/> <display value="Belgian laeken dog (organism)"/> </concept> <concept> <code value="78246003"/> <display value="Mexican hairless dog (organism)"/> </concept> <concept> <code value="83504004"/> <display value="Finnish spitz dog (organism)"/> </concept> <concept> <code value="84660008"/> <display value="Karelian bear dog (organism)"/> </concept> <concept> <code value="85144002"/> <display value="Belgian sheepdog (organism)"/> </concept> <concept> <code value="91553005"/> <display value="Canadian eskimo dog (organism)"/> </concept> <concept> <code value="300004"/> <display value="Miniature schnauzer (organism)"/> </concept> <concept> <code value="132371002"/> <display value="Bichon Teneriffe dog breed (organism)"/> </concept> <concept> <code value="132376007"/> <display value="Brandlbracke dog breed (organism)"/> </concept> <concept> <code value="132388009"/> <display value="English Bulldog breed (organism)"/> </concept> <concept> <code value="132416002"/> <display value="Bruno de Jura dog breed (organism)"/> </concept> <concept> <code value="132428005"/> <display value="Holland Shepherd dog breed (organism)"/> </concept> <concept> <code value="132431006"/> <display value="Jindo dog breed (organism)"/> </concept> <concept> <code value="132447008"/> <display value="Pyrenean Mastiff dog breed (organism)"/> </concept> <concept> <code value="132451005"/> <display value="South Russian Steppe Hound dog breed (organism)"/> </concept> <concept> <code value="132453008"/> <display value="Berger du Languedoc dog breed (organism)"/> </concept> <concept> <code value="132460002"/> <display value="Yugoslavian Hound dog breed (organism)"/> </concept> <concept> <code 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