Genomics Reporting Implementation Guide
2.0.0 - trial-use
Genomics Reporting Implementation Guide
2.0.0 - trial-use
This page is part of the Genetic Reporting Implementation Guide (v2.0.0: STU 2) based on FHIR R4. This is the current published version. For a full list of available versions, see the Directory of published versions 
TTL representation of the coded-annotation data type profile.
@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
# - resource -------------------------------------------------------------------
a fhir:StructureDefinition;
fhir:nodeRole fhir:treeRoot;
fhir:Resource.id [ fhir:value "coded-annotation"];
fhir:DomainResource.text [
fhir:Narrative.status [ fhir:value "extensions" ];
fhir:Narrative.div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><table border=\"0\" cellpadding=\"0\" cellspacing=\"0\" style=\"border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;\"><tr style=\"border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top\"><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"The logical name of the element\">Name</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Information about the use of the element\">Flags</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Minimum and Maximum # of times the the element can appear in the instance\">Card.</a></th><th style=\"width: 100px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Reference to the type of the element\">Type</a></th><th style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Additional information about the element\">Description & Constraints</a><span style=\"float: right\"><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/></a></span></th></tr><tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white\"><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_element.gif\" alt=\".\" style=\"background-color: white; background-color: inherit\" title=\"Element\" class=\"hierarchy\"/> <a href=\"StructureDefinition-coded-annotation-definitions.html#Annotation\">Annotation</a><a name=\"Annotation\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">0</span><span style=\"opacity: 0.5\">..</span><span style=\"opacity: 0.5\">*</span></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#Annotation\">Annotation</a></td><td style=\"vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Text node with attribution</span></td></tr>\r\n<tr style=\"border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7\"><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck04.png)\" class=\"hierarchy\"><img src=\"tbl_spacer.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"tbl_vjoin_end.png\" alt=\".\" style=\"background-color: inherit\" class=\"hierarchy\"/><img src=\"icon_slice_item.png\" alt=\".\" style=\"background-color: #F7F7F7; background-color: inherit\" title=\"Slice Item\" class=\"hierarchy\"/> <a href=\"StructureDefinition-coded-annotation-definitions.html#Annotation.extension:code\" title=\"Extension URL = http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/annotation-code\">annotation-code</a><a name=\"Annotation.extension\"> </a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"/><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\">0..1</td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><a href=\"http://hl7.org/fhir/R4/datatypes.html#CodeableConcept\">CodeableConcept</a></td><td style=\"vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px\" class=\"hierarchy\"><span style=\"opacity: 0.5\">Annotation Code</span><br/><span style=\"font-weight:bold\">URL: </span><a href=\"http://hl7.org/fhir/R4/StructureDefinition-annotation-code.html\">http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/annotation-code</a><br/><span style=\"font-weight:bold\">Binding: </span><a href=\"ValueSet-coded-annotation-types-vs.html\">Coded Annotation Types</a> (<a href=\"http://hl7.org/fhir/R4/terminologies.html#example\" title=\"Instances are not expected or even encouraged to draw from the specified value set. The value set merely provides examples of the types of concepts intended to be included.\">example</a>)</td></tr>\r\n<tr><td colspan=\"5\" class=\"hierarchy\"><br/><a href=\"http://hl7.org/fhir/R4/formats.html#table\" title=\"Legend for this format\"><img src=\"http://hl7.org/fhir/R4/help16.png\" alt=\"doco\" style=\"background-color: inherit\"/> Documentation for this format</a></td></tr></table></div>"
];
fhir:StructureDefinition.url [ fhir:value "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/coded-annotation"];
fhir:StructureDefinition.version [ fhir:value "2.0.0"];
fhir:StructureDefinition.name [ fhir:value "CodedAnnotation"];
fhir:StructureDefinition.title [ fhir:value "Coded Annotation"];
fhir:StructureDefinition.status [ fhir:value "active"];
fhir:StructureDefinition.date [ fhir:value "2022-05-09T16:59:16+00:00"^^xsd:dateTime];
fhir:StructureDefinition.publisher [ fhir:value "HL7 Clinical Genomics Working Group"];
fhir:StructureDefinition.contact [
fhir:index 0;
fhir:ContactDetail.name [ fhir:value "HL7 Clinical Genomics Working Group" ];
fhir:ContactDetail.telecom [
fhir:index 0;
fhir:ContactPoint.system [ fhir:value "url" ];
fhir:ContactPoint.value [ fhir:value "http://www.hl7.org/Special/committees/clingenomics" ] ], [
fhir:index 1;
fhir:ContactPoint.system [ fhir:value "email" ];
fhir:ContactPoint.value [ fhir:value "cg@lists.HL7.org" ] ]
];
fhir:StructureDefinition.description [ fhir:value "Annotation DataType with added CodeableConcept extension element"];
fhir:StructureDefinition.jurisdiction [
fhir:index 0;
fhir:CodeableConcept.coding [
fhir:index 0;
fhir:Coding.system [ fhir:value "http://unstats.un.org/unsd/methods/m49/m49.htm" ];
fhir:Coding.code [ fhir:value "001" ];
fhir:Coding.display [ fhir:value "World" ] ]
];
fhir:StructureDefinition.fhirVersion [ fhir:value "4.0.1"];
fhir:StructureDefinition.mapping [
fhir:index 0;
fhir:StructureDefinition.mapping.identity [ fhir:value "v2" ];
fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/v2" ];
fhir:StructureDefinition.mapping.name [ fhir:value "HL7 v2 Mapping" ]
], [
fhir:index 1;
fhir:StructureDefinition.mapping.identity [ fhir:value "rim" ];
fhir:StructureDefinition.mapping.uri [ fhir:value "http://hl7.org/v3" ];
fhir:StructureDefinition.mapping.name [ fhir:value "RIM Mapping" ]
];
fhir:StructureDefinition.kind [ fhir:value "complex-type"];
fhir:StructureDefinition.abstract [ fhir:value "false"^^xsd:boolean];
fhir:StructureDefinition.type [ fhir:value "Annotation"];
fhir:StructureDefinition.baseDefinition [
fhir:value "http://hl7.org/fhir/StructureDefinition/Annotation";
fhir:link <http://hl7.org/fhir/StructureDefinition/Annotation>
];
fhir:StructureDefinition.derivation [ fhir:value "constraint"];
fhir:StructureDefinition.snapshot [
fhir:StructureDefinition.snapshot.element [
fhir:index 0;
fhir:Element.id [ fhir:value "Annotation" ];
fhir:ElementDefinition.path [ fhir:value "Annotation" ];
fhir:ElementDefinition.short [ fhir:value "Text node with attribution" ];
fhir:ElementDefinition.definition [ fhir:value "A text note which also contains information about who made the statement and when." ];
fhir:ElementDefinition.comment [ fhir:value "For systems that do not have structured annotations, they can simply communicate a single annotation with no author or time. This element may need to be included in narrative because of the potential for modifying information. *Annotations SHOULD NOT* be used to communicate \"modifying\" information that could be computable. (This is a SHOULD because enforcing user behavior is nearly impossible)." ];
fhir:ElementDefinition.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.max [ fhir:value "*" ];
fhir:ElementDefinition.base [
fhir:ElementDefinition.base.path [ fhir:value "Annotation" ];
fhir:ElementDefinition.base.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.base.max [ fhir:value "*" ] ];
fhir:ElementDefinition.condition [
fhir:value "ele-1";
fhir:index 0 ];
fhir:ElementDefinition.constraint [
fhir:index 0;
fhir:ElementDefinition.constraint.key [ fhir:value "ele-1" ];
fhir:ElementDefinition.constraint.severity [ fhir:value "error" ];
fhir:ElementDefinition.constraint.human [ fhir:value "All FHIR elements must have a @value or children" ];
fhir:ElementDefinition.constraint.expression [ fhir:value "hasValue() or (children().count() > id.count())" ];
fhir:ElementDefinition.constraint.xpath [ fhir:value "@value|f:*|h:div" ];
fhir:ElementDefinition.constraint.source [
fhir:value "http://hl7.org/fhir/StructureDefinition/Element";
fhir:link <http://hl7.org/fhir/StructureDefinition/Element> ] ];
fhir:ElementDefinition.isModifier [ fhir:value "false"^^xsd:boolean ];
fhir:ElementDefinition.mapping [
fhir:index 0;
fhir:ElementDefinition.mapping.identity [ fhir:value "rim" ];
fhir:ElementDefinition.mapping.map [ fhir:value "n/a" ] ], [
fhir:index 1;
fhir:ElementDefinition.mapping.identity [ fhir:value "v2" ];
fhir:ElementDefinition.mapping.map [ fhir:value "N/A" ] ], [
fhir:index 2;
fhir:ElementDefinition.mapping.identity [ fhir:value "rim" ];
fhir:ElementDefinition.mapping.map [ fhir:value "Act" ] ] ], [
fhir:index 1;
fhir:Element.id [ fhir:value "Annotation.id" ];
fhir:ElementDefinition.path [ fhir:value "Annotation.id" ];
fhir:ElementDefinition.representation [
fhir:value "xmlAttr";
fhir:index 0 ];
fhir:ElementDefinition.short [ fhir:value "Unique id for inter-element referencing" ];
fhir:ElementDefinition.definition [ fhir:value "Unique id for the element within a resource (for internal references). This may be any string value that does not contain spaces." ];
fhir:ElementDefinition.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.max [ fhir:value "1" ];
fhir:ElementDefinition.base [
fhir:ElementDefinition.base.path [ fhir:value "Element.id" ];
fhir:ElementDefinition.base.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.base.max [ fhir:value "1" ] ];
fhir:ElementDefinition.type [
fhir:index 0;
fhir:Element.extension [
fhir:index 0;
fhir:Extension.url [ fhir:value "http://hl7.org/fhir/StructureDefinition/structuredefinition-fhir-type" ];
fhir:Extension.valueUrl [ fhir:value "string" ] ];
fhir:ElementDefinition.type.code [ fhir:value "http://hl7.org/fhirpath/System.String" ] ];
fhir:ElementDefinition.isModifier [ fhir:value "false"^^xsd:boolean ];
fhir:ElementDefinition.isSummary [ fhir:value "false"^^xsd:boolean ];
fhir:ElementDefinition.mapping [
fhir:index 0;
fhir:ElementDefinition.mapping.identity [ fhir:value "rim" ];
fhir:ElementDefinition.mapping.map [ fhir:value "n/a" ] ] ], [
fhir:index 2;
fhir:Element.id [ fhir:value "Annotation.extension" ];
fhir:ElementDefinition.path [ fhir:value "Annotation.extension" ];
fhir:ElementDefinition.slicing [
fhir:ElementDefinition.slicing.discriminator [
fhir:index 0;
fhir:ElementDefinition.slicing.discriminator.type [ fhir:value "value" ];
fhir:ElementDefinition.slicing.discriminator.path [ fhir:value "url" ] ];
fhir:ElementDefinition.slicing.description [ fhir:value "Extensions are always sliced by (at least) url" ];
fhir:ElementDefinition.slicing.rules [ fhir:value "open" ] ];
fhir:ElementDefinition.short [ fhir:value "Additional content defined by implementations" ];
fhir:ElementDefinition.definition [ fhir:value "May be used to represent additional information that is not part of the basic definition of the element. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension." ];
fhir:ElementDefinition.comment [ fhir:value "There can be no stigma associated with the use of extensions by any application, project, or standard - regardless of the institution or jurisdiction that uses or defines the extensions. The use of extensions is what allows the FHIR specification to retain a core level of simplicity for everyone." ];
fhir:ElementDefinition.alias [
fhir:value "extensions";
fhir:index 0 ], [
fhir:value "user content";
fhir:index 1 ];
fhir:ElementDefinition.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.max [ fhir:value "*" ];
fhir:ElementDefinition.base [
fhir:ElementDefinition.base.path [ fhir:value "Element.extension" ];
fhir:ElementDefinition.base.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.base.max [ fhir:value "*" ] ];
fhir:ElementDefinition.type [
fhir:index 0;
fhir:ElementDefinition.type.code [ fhir:value "Extension" ] ];
fhir:ElementDefinition.constraint [
fhir:index 0;
fhir:ElementDefinition.constraint.key [ fhir:value "ele-1" ];
fhir:ElementDefinition.constraint.severity [ fhir:value "error" ];
fhir:ElementDefinition.constraint.human [ fhir:value "All FHIR elements must have a @value or children" ];
fhir:ElementDefinition.constraint.expression [ fhir:value "hasValue() or (children().count() > id.count())" ];
fhir:ElementDefinition.constraint.xpath [ fhir:value "@value|f:*|h:div" ];
fhir:ElementDefinition.constraint.source [
fhir:value "http://hl7.org/fhir/StructureDefinition/Element";
fhir:link <http://hl7.org/fhir/StructureDefinition/Element> ] ], [
fhir:index 1;
fhir:ElementDefinition.constraint.key [ fhir:value "ext-1" ];
fhir:ElementDefinition.constraint.severity [ fhir:value "error" ];
fhir:ElementDefinition.constraint.human [ fhir:value "Must have either extensions or value[x], not both" ];
fhir:ElementDefinition.constraint.expression [ fhir:value "extension.exists() != value.exists()" ];
fhir:ElementDefinition.constraint.xpath [ fhir:value "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])" ];
fhir:ElementDefinition.constraint.source [
fhir:value "http://hl7.org/fhir/StructureDefinition/Extension";
fhir:link <http://hl7.org/fhir/StructureDefinition/Extension> ] ];
fhir:ElementDefinition.isModifier [ fhir:value "false"^^xsd:boolean ];
fhir:ElementDefinition.isSummary [ fhir:value "false"^^xsd:boolean ];
fhir:ElementDefinition.mapping [
fhir:index 0;
fhir:ElementDefinition.mapping.identity [ fhir:value "rim" ];
fhir:ElementDefinition.mapping.map [ fhir:value "n/a" ] ] ], [
fhir:index 3;
fhir:Element.id [ fhir:value "Annotation.extension:code" ];
fhir:ElementDefinition.path [ fhir:value "Annotation.extension" ];
fhir:ElementDefinition.sliceName [ fhir:value "code" ];
fhir:ElementDefinition.short [ fhir:value "Annotation Code" ];
fhir:ElementDefinition.definition [ fhir:value "Codifies the content of an Annotation" ];
fhir:ElementDefinition.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.max [ fhir:value "1" ];
fhir:ElementDefinition.base [
fhir:ElementDefinition.base.path [ fhir:value "Element.extension" ];
fhir:ElementDefinition.base.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.base.max [ fhir:value "*" ] ];
fhir:ElementDefinition.type [
fhir:index 0;
fhir:ElementDefinition.type.code [ fhir:value "Extension" ];
fhir:ElementDefinition.type.profile [
fhir:value "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/annotation-code";
fhir:index 0;
fhir:link <http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/annotation-code> ] ];
fhir:ElementDefinition.constraint [
fhir:index 0;
fhir:ElementDefinition.constraint.key [ fhir:value "ele-1" ];
fhir:ElementDefinition.constraint.severity [ fhir:value "error" ];
fhir:ElementDefinition.constraint.human [ fhir:value "All FHIR elements must have a @value or children" ];
fhir:ElementDefinition.constraint.expression [ fhir:value "hasValue() or (children().count() > id.count())" ];
fhir:ElementDefinition.constraint.xpath [ fhir:value "@value|f:*|h:div" ];
fhir:ElementDefinition.constraint.source [
fhir:value "http://hl7.org/fhir/StructureDefinition/Element";
fhir:link <http://hl7.org/fhir/StructureDefinition/Element> ] ], [
fhir:index 1;
fhir:ElementDefinition.constraint.key [ fhir:value "ext-1" ];
fhir:ElementDefinition.constraint.severity [ fhir:value "error" ];
fhir:ElementDefinition.constraint.human [ fhir:value "Must have either extensions or value[x], not both" ];
fhir:ElementDefinition.constraint.expression [ fhir:value "extension.exists() != value.exists()" ];
fhir:ElementDefinition.constraint.xpath [ fhir:value "exists(f:extension)!=exists(f:*[starts-with(local-name(.), \"value\")])" ];
fhir:ElementDefinition.constraint.source [
fhir:value "http://hl7.org/fhir/StructureDefinition/Extension";
fhir:link <http://hl7.org/fhir/StructureDefinition/Extension> ] ];
fhir:ElementDefinition.isModifier [ fhir:value "false"^^xsd:boolean ];
fhir:ElementDefinition.isSummary [ fhir:value "false"^^xsd:boolean ] ], [
fhir:index 4;
fhir:Element.id [ fhir:value "Annotation.author[x]" ];
fhir:ElementDefinition.path [ fhir:value "Annotation.author[x]" ];
fhir:ElementDefinition.short [ fhir:value "Individual responsible for the annotation" ];
fhir:ElementDefinition.definition [ fhir:value "The individual responsible for making the annotation." ];
fhir:ElementDefinition.comment [ fhir:value "Organization is used when there's no need for specific attribution as to who made the comment." ];
fhir:ElementDefinition.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.max [ fhir:value "1" ];
fhir:ElementDefinition.base [
fhir:ElementDefinition.base.path [ fhir:value "Annotation.author[x]" ];
fhir:ElementDefinition.base.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.base.max [ fhir:value "1" ] ];
fhir:ElementDefinition.type [
fhir:index 0;
fhir:ElementDefinition.type.code [ fhir:value "Reference" ];
fhir:ElementDefinition.type.targetProfile [
fhir:value "http://hl7.org/fhir/StructureDefinition/Practitioner";
fhir:index 0;
fhir:link <http://hl7.org/fhir/StructureDefinition/Practitioner> ], [
fhir:value "http://hl7.org/fhir/StructureDefinition/Patient";
fhir:index 1;
fhir:link <http://hl7.org/fhir/StructureDefinition/Patient> ], [
fhir:value "http://hl7.org/fhir/StructureDefinition/RelatedPerson";
fhir:index 2;
fhir:link <http://hl7.org/fhir/StructureDefinition/RelatedPerson> ], [
fhir:value "http://hl7.org/fhir/StructureDefinition/Organization";
fhir:index 3;
fhir:link <http://hl7.org/fhir/StructureDefinition/Organization> ] ], [
fhir:index 1;
fhir:ElementDefinition.type.code [ fhir:value "string" ] ];
fhir:ElementDefinition.constraint [
fhir:index 0;
fhir:ElementDefinition.constraint.key [ fhir:value "ele-1" ];
fhir:ElementDefinition.constraint.severity [ fhir:value "error" ];
fhir:ElementDefinition.constraint.human [ fhir:value "All FHIR elements must have a @value or children" ];
fhir:ElementDefinition.constraint.expression [ fhir:value "hasValue() or (children().count() > id.count())" ];
fhir:ElementDefinition.constraint.xpath [ fhir:value "@value|f:*|h:div" ];
fhir:ElementDefinition.constraint.source [
fhir:value "http://hl7.org/fhir/StructureDefinition/Element";
fhir:link <http://hl7.org/fhir/StructureDefinition/Element> ] ];
fhir:ElementDefinition.isModifier [ fhir:value "false"^^xsd:boolean ];
fhir:ElementDefinition.isSummary [ fhir:value "true"^^xsd:boolean ];
fhir:ElementDefinition.mapping [
fhir:index 0;
fhir:ElementDefinition.mapping.identity [ fhir:value "v2" ];
fhir:ElementDefinition.mapping.map [ fhir:value "N/A" ] ], [
fhir:index 1;
fhir:ElementDefinition.mapping.identity [ fhir:value "rim" ];
fhir:ElementDefinition.mapping.map [ fhir:value "Act.participant[typeCode=AUT].role" ] ] ], [
fhir:index 5;
fhir:Element.id [ fhir:value "Annotation.time" ];
fhir:ElementDefinition.path [ fhir:value "Annotation.time" ];
fhir:ElementDefinition.short [ fhir:value "When the annotation was made" ];
fhir:ElementDefinition.definition [ fhir:value "Indicates when this particular annotation was made." ];
fhir:ElementDefinition.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.max [ fhir:value "1" ];
fhir:ElementDefinition.base [
fhir:ElementDefinition.base.path [ fhir:value "Annotation.time" ];
fhir:ElementDefinition.base.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.base.max [ fhir:value "1" ] ];
fhir:ElementDefinition.type [
fhir:index 0;
fhir:ElementDefinition.type.code [ fhir:value "dateTime" ] ];
fhir:ElementDefinition.constraint [
fhir:index 0;
fhir:ElementDefinition.constraint.key [ fhir:value "ele-1" ];
fhir:ElementDefinition.constraint.severity [ fhir:value "error" ];
fhir:ElementDefinition.constraint.human [ fhir:value "All FHIR elements must have a @value or children" ];
fhir:ElementDefinition.constraint.expression [ fhir:value "hasValue() or (children().count() > id.count())" ];
fhir:ElementDefinition.constraint.xpath [ fhir:value "@value|f:*|h:div" ];
fhir:ElementDefinition.constraint.source [
fhir:value "http://hl7.org/fhir/StructureDefinition/Element";
fhir:link <http://hl7.org/fhir/StructureDefinition/Element> ] ];
fhir:ElementDefinition.isModifier [ fhir:value "false"^^xsd:boolean ];
fhir:ElementDefinition.isSummary [ fhir:value "true"^^xsd:boolean ];
fhir:ElementDefinition.mapping [
fhir:index 0;
fhir:ElementDefinition.mapping.identity [ fhir:value "v2" ];
fhir:ElementDefinition.mapping.map [ fhir:value "N/A" ] ], [
fhir:index 1;
fhir:ElementDefinition.mapping.identity [ fhir:value "rim" ];
fhir:ElementDefinition.mapping.map [ fhir:value "Act.effectiveTime" ] ] ], [
fhir:index 6;
fhir:Element.id [ fhir:value "Annotation.text" ];
fhir:ElementDefinition.path [ fhir:value "Annotation.text" ];
fhir:ElementDefinition.short [ fhir:value "The annotation - text content (as markdown)" ];
fhir:ElementDefinition.definition [ fhir:value "The text of the annotation in markdown format." ];
fhir:ElementDefinition.min [ fhir:value "1"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.max [ fhir:value "1" ];
fhir:ElementDefinition.base [
fhir:ElementDefinition.base.path [ fhir:value "Annotation.text" ];
fhir:ElementDefinition.base.min [ fhir:value "1"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.base.max [ fhir:value "1" ] ];
fhir:ElementDefinition.type [
fhir:index 0;
fhir:ElementDefinition.type.code [ fhir:value "markdown" ] ];
fhir:ElementDefinition.constraint [
fhir:index 0;
fhir:ElementDefinition.constraint.key [ fhir:value "ele-1" ];
fhir:ElementDefinition.constraint.severity [ fhir:value "error" ];
fhir:ElementDefinition.constraint.human [ fhir:value "All FHIR elements must have a @value or children" ];
fhir:ElementDefinition.constraint.expression [ fhir:value "hasValue() or (children().count() > id.count())" ];
fhir:ElementDefinition.constraint.xpath [ fhir:value "@value|f:*|h:div" ];
fhir:ElementDefinition.constraint.source [
fhir:value "http://hl7.org/fhir/StructureDefinition/Element";
fhir:link <http://hl7.org/fhir/StructureDefinition/Element> ] ];
fhir:ElementDefinition.isModifier [ fhir:value "false"^^xsd:boolean ];
fhir:ElementDefinition.isSummary [ fhir:value "true"^^xsd:boolean ];
fhir:ElementDefinition.mapping [
fhir:index 0;
fhir:ElementDefinition.mapping.identity [ fhir:value "v2" ];
fhir:ElementDefinition.mapping.map [ fhir:value "N/A" ] ], [
fhir:index 1;
fhir:ElementDefinition.mapping.identity [ fhir:value "rim" ];
fhir:ElementDefinition.mapping.map [ fhir:value "Act.text" ] ] ]
];
fhir:StructureDefinition.differential [
fhir:StructureDefinition.differential.element [
fhir:index 0;
fhir:Element.id [ fhir:value "Annotation" ];
fhir:ElementDefinition.path [ fhir:value "Annotation" ] ], [
fhir:index 1;
fhir:Element.id [ fhir:value "Annotation.extension:code" ];
fhir:ElementDefinition.path [ fhir:value "Annotation.extension" ];
fhir:ElementDefinition.sliceName [ fhir:value "code" ];
fhir:ElementDefinition.min [ fhir:value "0"^^xsd:nonNegativeInteger ];
fhir:ElementDefinition.max [ fhir:value "1" ];
fhir:ElementDefinition.type [
fhir:index 0;
fhir:ElementDefinition.type.code [ fhir:value "Extension" ];
fhir:ElementDefinition.type.profile [
fhir:value "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/annotation-code";
fhir:index 0;
fhir:link <http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/annotation-code> ] ] ]
].
# - ontology header ------------------------------------------------------------
a owl:Ontology;
owl:imports fhir:fhir.ttl.
IG © 2022+ HL7 Clinical Genomics Working Group. Package hl7.fhir.uv.genomics-reporting#2.0.0 based on FHIR 4.0.1. Generated 2022-05-09
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