Genomics Reporting Implementation Guide
3.0.0 - STU3 International flag

This page is part of the Genetic Reporting Implementation Guide (v3.0.0: STU3) based on FHIR (HL7® FHIR® Standard) R4. This is the current published version in its permanent home (it will always be available at this URL). For a full list of available versions, see the Directory of published versions

Example Observation: STAG2-insertion-molc

Generated Narrative: Observation STAG2-insertion-molc

status: Final

category: Laboratory, Genetics

code: Molecular Consequence

subject: Adam B. Everyman Male, DoB: 1951-01-20 ( Medical Record Number: m123 (use: usual, ))

effective: 2023-02-01

performer: Practitioner Test Dolin

derivedFrom: Observation Genetic variant assessment

component

code: coding HGVS

value: NM_006603.5:c.3530_3531insGTGACTATTAATAT

component

code: Transcript reference sequence [ID]

value: NM_006603.5

component

code: Feature Consequence

value: frameshift_variant

component

code: Amino acid change (pHGVS)

value: NP_006594.3:p.S1178*