Genomics Reporting Implementation Guide (STU1)

This page is part of the Genetic Reporting Implementation Guide (v1.0.0: STU 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

Value Set /ValueSet/seq-phase-relationship

Summary

Defining URL:http://hl7.org/fhir/uv/genomics-reporting/ValueSet/seq-phase-relationship
Version:1.0.0
Name:SequencePhaseRelationship
Definition:

Sequence Phase Relationship Types

Publisher:HL7 (Clinical Genomics)
Source Resource:XML / JSON / Turtle

Content Logical Definition

seq-phase-relationship

Sequence Phase Relationship Types

This value set includes codes from the following code systems:

 

Expansion

This value set contains 4 concepts

Expansion based on http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/seq-phase-relationship version 1.0.0

All codes from system http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/seq-phase-relationship

CodeDisplayDefinition
CisCisPhase is in cis (same chromosome)
TransTransPhase is in trans (different chromosomes)
IndeterminateIndeterminatePhase is unable to be determined
UnknownUnknownPhase is unknown

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
Source The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code