Genomics Reporting Implementation Guide (STU1)

This page is part of the Genetic Reporting Implementation Guide (v1.0.0: STU 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

Example - Multiple Oncology Variant Report Example

Format(s):

Narrative view

Bundle oncology-report-example of type transaction


Entry 1 - Full URL = urn:uuid:fc16d84c-8584-4e1d-baae-64e2f95bfe17

Response:

POST Organization
If-None-Exist: identifier=http://molit.eu/fhir/genomics/NamingSystem/organization|CEGAT

Resource Organization:


Entry 2 - Full URL = urn:uuid:f7a438e6-f484-453d-97e8-aa4d51008648

Response:

POST Patient
If-None-Exist: identifier=http://molit.eu/fhir/genomics/NamingSystem/cegat/patID|11111

Resource Patient:


Entry 3 - Full URL = urn:uuid:a2041c83-b73d-4fc8-9466-4ba4a92da516

Response:

POST Specimen
If-None-Exist: identifier=http://molit.eu/fhir/genomics/NamingSystem/cegat/tissueID|UNKNOWN

Resource Specimen:


Entry 4 - Full URL = urn:uuid:dac358c3-403a-4dbb-b478-4259aed882ae

Response:

POST Observation

Resource Observation:


Entry 5 - Full URL = urn:uuid:1d773d66-cec7-44a2-b92a-46d00adeae00

Response:

POST Observation

Resource Observation:


Entry 6 - Full URL = urn:uuid:842d9ab9-d940-4f0c-adf9-e5c528f5c0e5

Response:

POST Observation

Resource Observation:


Entry 7 - Full URL = urn:uuid:9a9f9a4a-52e3-4738-bd0b-a25374bbf358

Response:

POST Observation

Resource Observation:


Entry 8 - Full URL = urn:uuid:58828523-8893-45fc-973b-16290366c5e5

Response:

POST Observation

Resource Observation:


Entry 9 - Full URL = urn:uuid:2c28b23f-3e9f-4c03-8c8f-0e76bc5dc9c2

Response:

POST Observation

Resource Observation:


Entry 10 - Full URL = urn:uuid:41bebbe5-e06f-4867-aa22-7c06db69dbd1

Response:

POST Observation

Resource Observation:


Entry 11 - Full URL = urn:uuid:1642f190-e2c6-4999-8040-b9b2a70618bf

Response:

POST Observation

Resource Observation:


Entry 12 - Full URL = urn:uuid:c3587931-242f-4129-93f9-be24500c8f29

Response:

POST Observation

Resource Observation:


Entry 13 - Full URL = urn:uuid:41695fc0-1fd5-4cc8-95e6-82b2848a5cb6

Response:

POST Observation

Resource Observation:


Entry 14 - Full URL = urn:uuid:58eb14f6-4059-4168-86a9-155ae61d30e2

Response:

POST Observation

Resource Observation:


Entry 15 - Full URL = urn:uuid:1a71e80f-b044-4a91-80e1-eadbe5a53dca

Response:

POST Observation

Resource Observation:


Entry 16 - Full URL = urn:uuid:6a80003f-822d-489e-8286-1f1dcba56dfa

Response:

POST DiagnosticReport

Resource DiagnosticReport: