Genomics Reporting Implementation Guide (STU1)

This page is part of the Genetic Reporting Implementation Guide (v1.0.0: STU 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

Concept mapping for DNA Change Type

Format(s):

Narrative view

DNAChangeType (http://hl7.org/fhir/uv/genomics-reporting/ConceptMap/dna-change-type)

Mapping from http://loinc.org to http://www.sequenceontology.org

DRAFT (not intended for production usage). Published on Oct 4, 2019 12:00:00 AM by HL7 (Clinical Genomics) ().

LOINC and SequenceOntology mappings for dna change type


Source CodeRelationshipDestination Code
LA9658-1 (Wild type)equivalentSO:0002073
LA6692-3 (Deletion)equivalentSO:0000159
LA6686-5 (Duplication)equivalentSO:1000035
LA6687-3 (Insertion)equivalentSO:0000667
LA6688-1 (Insertion/Deletion)equivalentSO:1000032
LA6689-9 (Inversion)equivalentSO:1000036
LA6690-7 (Substitution)equivalentSO:1000002