Genomics Reporting Implementation Guide (STU1)
This page is part of the Genetic Reporting Implementation Guide (v1.0.0: STU 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions 
Format(s):
Narrative view
Bundle diagnosticreport-pgxexample of type transaction
Entry 1 - Full URL = http://example.org/fhir/DiagnosticReport/pgx-report
Response:
POST DiagnosticReport
Resource DiagnosticReport:
Entry 2 - Full URL = http://example.org/fhir/Patient/patient
Response:
POST Patient
Resource Patient:
This would contain patient identifiers, demographics, etc.
Entry 3 - Full URL = http://example.org/fhir/Specimen/specimen
Response:
POST Patient
Resource Specimen:
TODO
Entry 4 - Full URL = http://example.org/fhir/Organization/lab
Response:
POST Organization
Resource Organization:
TODO
Entry 5 - Full URL = http://example.org/fhir/ServiceRequest/pgx-request
Response:
POST ServiceRequest
Resource ServiceRequest:
TODO
Entry 6 - Full URL = http://example.org/fhir/Observation/med-impact-pgx-example
Response:
POST Observation
Resource Observation:
Entry 7 - Full URL = http://example.org/fhir/Observation/genotype-pgx-example
Response:
POST Observation
Resource Observation:
Entry 8 - Full URL = http://example.org/fhir/Observation/haplotype-1-pgx-example
Response:
POST Observation
Resource Observation:
Entry 9 - Full URL = http://example.org/fhir/Observation/haplotype-2-pgx-example
Response:
POST Observation
Resource Observation:
Entry 10 - Full URL = http://example.org/fhir/Observation/variant-1-pgx-example
Response:
POST Observation
Resource Observation:
Entry 11 - Full URL = http://example.org/fhir/Observation/variant-2-pgx-example
Response:
POST Observation
Resource Observation:
Entry 12 - Full URL = http://example.org/fhir/MolecularSequence/sequence-1-pgx-example
Response:
POST MolecularSequence
Resource MolecularSequence:
Entry 13 - Full URL = http://example.org/fhir/MolecularSequence/sequence-2-pgx-example
Response:
POST MolecularSequence
Resource MolecularSequence:
Entry 14 - Full URL = http://example.org/fhir/Task/med-usage-impact-task-pgx-example
Response:
POST Task
Resource Task:
Entry 15 - Full URL = http://example.org/fhir/MedicationStatement/current-med-example
Response:
POST MedicationStatement
Resource MedicationUsage:
IG © 2017+ HL7 International Clinical Genomics Work Group. Package hl7.fhir.uv.genomics-reporting#1.0.0 based on FHIR 4.0.1. Generated 2019-11-20
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