Genomics Reporting Implementation Guide (STU1)

This page is part of the Genetic Reporting Implementation Guide (v1.0.0: STU 1) based on FHIR R4. The current version which supercedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

Example - Genomics Reporting

Format(s):

Narrative view

Bundle diagnosticreport-cgexample of type collection


Entry 1 - Full URL = http://example.org/fhir/DiagnosticReport/report

Resource DiagnosticReport:

TODO

Entry 2 - Full URL = http://example.org/fhir/Patient/patient

Resource Patient:

This would contain patient identifiers, demographics, etc.

Entry 3 - Full URL = http://example.org/fhir/Specimen/specimen

Resource Specimen:

TODO

Entry 4 - Full URL = http://example.org/fhir/Organization/lab

Resource Organization:

TODO

Entry 5 - Full URL = http://example.org/fhir/DiagnosticRequest/request

Resource ServiceRequest:

TODO

Entry 6 - Full URL = http://example.org/fhir/Observation/overall-interp

Resource Observation:

TODO

Entry 7 - Full URL = http://example.org/fhir/Observation/discrete-variant

Resource Observation:

TODO

Entry 8 - Full URL = http://example.org/fhir/Observation/dis-path

Resource Observation:

TODO

Entry 9 - Full URL = http://example.org/fhir/Observation/complex-variant

Resource Observation:

TODO

Entry 10 - Full URL = http://example.org/fhir/Observation/complex-dis-path

Resource Observation:

TODO

Entry 11 - Full URL = http://example.org/fhir/Observation/complex-component-D

Resource Observation:

TODO

Entry 12 - Full URL = http://example.org/fhir/Observation/complex-component-E

Resource Observation:

TODO

Entry 13 - Full URL = http://example.org/fhir/Observation/pharmPanel

Resource Observation:

TODO

Entry 14 - Full URL = http://example.org/fhir/Observation/haplotype

Resource Observation:

TODO

Entry 15 - Full URL = http://example.org/fhir/Observation/genotype

Resource Observation:

TODO

Entry 16 - Full URL = http://example.org/fhir/Observation/metab

Resource Observation:

TODO

Entry 17 - Full URL = http://example.org/fhir/Observation/efficacy

Resource Observation:

TODO

Entry 18 - Full URL = http://example.org/fhir/Observation/highrisk

Resource Observation:

TODO

Entry 19 - Full URL = http://example.org/fhir/Task/usage

Resource Task:

TODO