Generated Narrative: Procedure analysisTumorNormalDNA

Genomic Study Analysis Regions

• studied: DocumentReference: identifier = http://www.somesystemabc.net/identifiers/files#11117; status = current; docStatus = preliminary; description = WES_FullSequencedRegion_GRCh38: A sample Document Reference instance representing a BED file that may be used as input or output of a genomic analysis pipeline.; securityLabel = Restricted
• studied: ABL1
• studied: ALK
• studied: APC
• uncalled: DocumentReference: identifier = http://www.somesystemabc.net/identifiers/files#11146520; status = current; docStatus = preliminary; description = Regions deemed uncallable (generally due to low coverage).; securityLabel = Restricted

Genomic Study Analysis Method Type: Sequence analysis of the entire coding region

Genomic Study Analysis Method Type: Deletion/duplication analysis

Genomic Study Analysis Change Type: SNV

Genomic Study Analysis Change Type: MNV

Genomic Study Analysis Change Type: delins

Genomic Study Analysis Change Type: CNV

Genomic Study Analysis Genome Build: GRCh38

Genomic Study Analysis Specimen: Specimen: identifier = http://www.somesystemabc.net/identifiers/specimens#222333; status = available; type = Specimen from lung obtained by biopsy (specimen); receivedTime = 2023-01-23 01:01:01+0000; note = Tumor: 20%

Genomic Study Analysis Specimen: Specimen: identifier = http://www.somesystemabc.net/identifiers/specimens#444555; status = available; type = Blood specimen (specimen); receivedTime = 2023-01-23 01:01:01+0000

Genomic Study Analysis Focus: Substance Junior Hamsburg (official) Male, DoB: 1987-09-01 ( Medical record number: 1234567 (use: temp, period: 2021-01-01 --> (ongoing)))

Genomic Study Analysis Output

• type: VCF
• file: DocumentReference: identifier = http://www.somesystemabc.net/identifiers/files#1134121; status = current; docStatus = preliminary; description = VCF file containing identified variants; securityLabel = Restricted

status: Completed

category: Laboratory

subject: Substance Junior Hamsburg (official) Male, DoB: 1987-09-01 ( Medical record number: 1234567 (use: temp, period: 2021-01-01 --> (ongoing)))

performed: 2023-02-02 01:01:10-0600

note: For technical reasons, BCR gene was deemed uncallable.