Genomics Reporting Implementation Guide
2.0.0 - trial-use

This page is part of the Genetic Reporting Implementation Guide (v2.0.0: STU 2) based on FHIR R4. This is the current published version. For a full list of available versions, see the Directory of published versions

: SequencePhaseRelationExample1 - JSON Representation

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{
  "resourceType" : "Observation",
  "id" : "SequencePhaseRelationExample1",
  "meta" : {
    "profile" : [
      "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/sequence-phase-relationship"
    ]
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource \"SequencePhaseRelationExample1\" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-sequence-phase-relationship.html\">Sequence Phase Relationship</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Laboratory <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/3.1.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#laboratory)</span></p><p><b>code</b>: Allelic phase <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#82120-7)</span></p><p><b>issued</b>: Mar 5, 2019 4:04:44 PM</p><p><b>value</b>: Cis <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-sequence-phase-relationship-cs.html\">Sequence Phase Relationship Codes</a>#Cis)</span></p><p><b>derivedFrom</b>: </p><ul><li><a href=\"Observation-VariantExample1.html\">Observation/VariantExample1</a></li><li><a href=\"Observation-VariantExample2.html\">Observation/VariantExample2</a></li></ul></div>"
  },
  "status" : "final",
  "category" : [
    {
      "coding" : [
        {
          "system" : "http://terminology.hl7.org/CodeSystem/observation-category",
          "code" : "laboratory"
        }
      ]
    }
  ],
  "code" : {
    "coding" : [
      {
        "system" : "http://loinc.org",
        "code" : "82120-7"
      }
    ]
  },
  "issued" : "2019-03-05T16:04:44+00:00",
  "valueCodeableConcept" : {
    "coding" : [
      {
        "system" : "http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/sequence-phase-relationship-cs",
        "code" : "Cis",
        "display" : "Cis"
      }
    ]
  },
  "derivedFrom" : [
    {
      "reference" : "Observation/VariantExample1"
    },
    {
      "reference" : "Observation/VariantExample2"
    }
  ]
}