Genomics Reporting Implementation Guide
3.0.0-ballot - Ballot International flag

This page is part of the Genetic Reporting Implementation Guide (v3.0.0-ballot: STU 3 Ballot 1) based on FHIR (HL7® FHIR® Standard) R4. The current version which supersedes this version is 2.0.0. For a full list of available versions, see the Directory of published versions

: FindStudyMetadataOutput - XML Representation

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<Parameters xmlns="http://hl7.org/fhir">
  <id value="FindStudyMetadataOutput"/>
  <parameter>
    <name value="tests"/>
    <part>
      <name value="testId"/>
      <valueString value="test08736abc87"/>
    </part>
    <part>
      <name value="testDate"/>
      <valueDateTime value="2020-07-13"/>
    </part>
    <part>
      <name value="specimenId"/>
      <valueString value="specimen9652adbg69"/>
    </part>
    <part>
      <name value="genomicBuild"/>
      <valueCodeableConcept>
        <coding>
          <system value="http://loinc.org"/>
          <code value="LA26806-2"/>
          <display value="GRCh38"/>
        </coding>
      </valueCodeableConcept>
    </part>
    <part>
      <name value="dnaChangeType"/>
      <valueCodeableConcept>
        <coding>
          <system value="http://sequenceontology.org"/>
          <code value="SO:0001483"/>
          <display value="SNV"/>
        </coding>
        <coding>
          <system value="http://sequenceontology.org"/>
          <code value="SO:0002007"/>
          <display value="MNV"/>
        </coding>
        <coding>
          <system value="http://sequenceontology.org"/>
          <code value="SO:1000032"/>
          <display value="delins"/>
        </coding>
        <coding>
          <system value="http://sequenceontology.org"/>
          <code value="SO:0001019"/>
          <display value="copy_number_variation"/>
        </coding>
      </valueCodeableConcept>
    </part>
    <part>
      <name value="regionStudied"/>
      <valueString
                   value="['NC_000007.14:55019016-55019365', 'NC_000007.14:55142285-55142437', 'NC_000007.14:55143304-55143488', 'NC_000007.14:55146605-55146740', 'NC_000007.14:55151293-55151362', 'NC_000007.14:55152545-55152664', 'NC_000007.14:55154010-55154152', 'NC_000007.14:55155829-55155946', 'NC_000007.14:55156532-55156659', 'NC_000007.14:55156758-55156832', 'NC_000007.14:55157662-55157753', 'NC_000007.14:55160138-55160338', 'NC_000007.14:55161498-55161631', 'NC_000007.14:55163732-55163823', 'NC_000007.14:55165279-55165437', 'NC_000007.14:55171174-55171213', 'NC_000007.14:55172982-55173124', 'NC_000007.14:55173920-55174043', 'NC_000007.14:55174721-55174820', 'NC_000007.14:55181292-55181478', 'NC_000007.14:55191718-55191874', 'NC_000007.14:55192765-55192841', 'NC_000007.14:55198716-55198863', 'NC_000007.14:55200315-55200413', 'NC_000007.14:55201187-55201355', 'NC_000007.14:55201734-55201782', 'NC_000007.14:55202516-55202625', 'NC_000007.14:55205255-55211628']"/>
    </part>
    <part>
      <name value="uncallableRegions"/>
      <valueString
                   value="['NC_000007.14:55173910-55174053', 'NC_000007.14:55174711-55174830', 'NC_000007.14:55181282-55181488']"/>
    </part>
  </parameter>
</Parameters>